data_1TRQ
#
_model_server_result.job_id            6JABfqiL3rUKY-WES7l9HA 
_model_server_result.datetime_utc      '2024-11-25 17:38:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1trq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":105}' 
#
_entry.id    1TRQ 
#
_exptl.entry_id    1TRQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              363.221 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-2'-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.29 
_cell.angle_gamma         90 
_cell.entry_id            1TRQ 
_cell.length_a            49.34 
_cell.length_b            48.2 
_cell.length_c            40.15 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1TRQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 10 A CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
disulf ? disulf2 A SG CYS 6 A CYS 6 1_555 A SG CYS 103 A CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? 
disulf ? disulf3 B SG CYS 2 B CYS 202 1_555 B SG CYS 10 B CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
disulf ? disulf4 B SG CYS 6 B CYS 206 1_555 B SG CYS 103 B CYS 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc1 A OD2 ASP 15 A ASP 15 1_555 C CA CA . A CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc2 A OD1 ASP 15 A ASP 15 1_555 C CA CA . A CA 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? 
metalc ? metalc3 C CA CA . A CA 106 1_555 G O HOH . A HOH 468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc4 C CA CA . A CA 106 1_555 G O HOH . A HOH 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? 
metalc ? metalc5 C CA CA . A CA 106 1_555 G O HOH . A HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.219 ? 
metalc ? metalc6 B OD1 ASP 15 B ASP 215 1_555 E CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.805 ? 
metalc ? metalc7 B OD2 ASP 15 B ASP 215 1_555 E CA CA . B CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc8 E CA CA . B CA 306 1_555 H O HOH . B HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? 
metalc ? metalc9 E CA CA . B CA 306 1_555 H O HOH . B HOH 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? 
metalc ? metalc10 E CA CA . B CA 306 1_555 H O HOH . B HOH 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? 
metalc ? metalc11 E CA CA . B CA 306 1_555 H O HOH . B HOH 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? 
metalc ? metalc12 E CA CA . B CA 306 1_555 H O HOH . B HOH 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.151 ? 
#
_chem_comp.formula           'C10 H14 N5 O8 P' 
_chem_comp.formula_weight    363.221 
_chem_comp.id                2GP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "GUANOSINE-2'-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P 2GP doub 1 n n 
P O2P 2GP sing 2 n n 
P O3P 2GP sing 3 n n 
P O2' 2GP sing 4 n n 
O2P HOP2 2GP sing 5 n n 
O3P HOP3 2GP sing 6 n n 
O5' C5' 2GP sing 7 n n 
O5' HO5' 2GP sing 8 n n 
C5' C4' 2GP sing 9 n n 
C5' "H5'1" 2GP sing 10 n n 
C5' "H5'2" 2GP sing 11 n n 
C4' O4' 2GP sing 12 n n 
C4' C3' 2GP sing 13 n n 
C4' H4' 2GP sing 14 n n 
O4' C1' 2GP sing 15 n n 
C3' O3' 2GP sing 16 n n 
C3' C2' 2GP sing 17 n n 
C3' H3' 2GP sing 18 n n 
O3' HO3' 2GP sing 19 n n 
C2' O2' 2GP sing 20 n n 
C2' C1' 2GP sing 21 n n 
C2' H2' 2GP sing 22 n n 
C1' N9 2GP sing 23 n n 
C1' H1' 2GP sing 24 n n 
N9 C8 2GP sing 25 n y 
N9 C4 2GP sing 26 n y 
C8 N7 2GP doub 27 n y 
C8 H8 2GP sing 28 n n 
N7 C5 2GP sing 29 n y 
C5 C6 2GP sing 30 n n 
C5 C4 2GP doub 31 n y 
C6 O6 2GP doub 32 n n 
C6 N1 2GP sing 33 n n 
N1 C2 2GP sing 34 n n 
N1 HN1 2GP sing 35 n n 
C2 N2 2GP sing 36 n n 
C2 N3 2GP doub 37 n n 
N2 HN21 2GP sing 38 n n 
N2 HN22 2GP sing 39 n n 
N3 C4 2GP sing 40 n n 
#
_atom_sites.entry_id                     1TRQ 
_atom_sites.fract_transf_matrix[1][1]    0.020268 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000103 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020747 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024907 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 106 106 CA CA . 
D 3 2GP A 1 105 105 2GP 2GP . 
E 2 CA B 1 306 306 CA CA . 
F 3 2GP B 1 305 305 2GP 2GP . 
G 4 HOH A 1 402 402 HOH HOH . 
G 4 HOH A 2 403 403 HOH HOH . 
G 4 HOH A 3 404 404 HOH HOH . 
G 4 HOH A 4 405 405 HOH HOH . 
G 4 HOH A 5 411 411 HOH HOH . 
G 4 HOH A 6 416 416 HOH HOH . 
G 4 HOH A 7 419 419 HOH HOH . 
G 4 HOH A 8 420 420 HOH HOH . 
G 4 HOH A 9 424 424 HOH HOH . 
G 4 HOH A 10 425 425 HOH HOH . 
G 4 HOH A 11 426 426 HOH HOH . 
G 4 HOH A 12 428 428 HOH HOH . 
G 4 HOH A 13 429 429 HOH HOH . 
G 4 HOH A 14 435 435 HOH HOH . 
G 4 HOH A 15 437 437 HOH HOH . 
G 4 HOH A 16 439 439 HOH HOH . 
G 4 HOH A 17 441 441 HOH HOH . 
G 4 HOH A 18 447 447 HOH HOH . 
G 4 HOH A 19 448 448 HOH HOH . 
G 4 HOH A 20 449 449 HOH HOH . 
G 4 HOH A 21 451 451 HOH HOH . 
G 4 HOH A 22 453 453 HOH HOH . 
G 4 HOH A 23 454 454 HOH HOH . 
G 4 HOH A 24 455 455 HOH HOH . 
G 4 HOH A 25 457 457 HOH HOH . 
G 4 HOH A 26 459 459 HOH HOH . 
G 4 HOH A 27 462 462 HOH HOH . 
G 4 HOH A 28 464 464 HOH HOH . 
G 4 HOH A 29 465 465 HOH HOH . 
G 4 HOH A 30 466 466 HOH HOH . 
G 4 HOH A 31 467 467 HOH HOH . 
G 4 HOH A 32 468 468 HOH HOH . 
G 4 HOH A 33 471 471 HOH HOH . 
G 4 HOH A 34 476 476 HOH HOH . 
G 4 HOH A 35 477 477 HOH HOH . 
G 4 HOH A 36 478 478 HOH HOH . 
G 4 HOH A 37 481 481 HOH HOH . 
G 4 HOH A 38 482 482 HOH HOH . 
G 4 HOH A 39 483 483 HOH HOH . 
G 4 HOH A 40 484 484 HOH HOH . 
G 4 HOH A 41 485 485 HOH HOH . 
G 4 HOH A 42 486 486 HOH HOH . 
G 4 HOH A 43 489 489 HOH HOH . 
G 4 HOH A 44 499 499 HOH HOH . 
G 4 HOH A 45 500 500 HOH HOH . 
G 4 HOH A 46 501 501 HOH HOH . 
G 4 HOH A 47 502 502 HOH HOH . 
G 4 HOH A 48 504 504 HOH HOH . 
G 4 HOH A 49 505 505 HOH HOH . 
G 4 HOH A 50 506 506 HOH HOH . 
G 4 HOH A 51 508 508 HOH HOH . 
G 4 HOH A 52 509 509 HOH HOH . 
G 4 HOH A 53 511 511 HOH HOH . 
G 4 HOH A 54 516 516 HOH HOH . 
G 4 HOH A 55 517 517 HOH HOH . 
G 4 HOH A 56 518 518 HOH HOH . 
H 4 HOH B 1 400 400 HOH HOH . 
H 4 HOH B 2 401 401 HOH HOH . 
H 4 HOH B 3 406 406 HOH HOH . 
H 4 HOH B 4 407 407 HOH HOH . 
H 4 HOH B 5 408 408 HOH HOH . 
H 4 HOH B 6 409 409 HOH HOH . 
H 4 HOH B 7 410 410 HOH HOH . 
H 4 HOH B 8 412 412 HOH HOH . 
H 4 HOH B 9 413 413 HOH HOH . 
H 4 HOH B 10 414 414 HOH HOH . 
H 4 HOH B 11 415 415 HOH HOH . 
H 4 HOH B 12 417 417 HOH HOH . 
H 4 HOH B 13 418 418 HOH HOH . 
H 4 HOH B 14 421 421 HOH HOH . 
H 4 HOH B 15 422 422 HOH HOH . 
H 4 HOH B 16 423 423 HOH HOH . 
H 4 HOH B 17 427 427 HOH HOH . 
H 4 HOH B 18 430 430 HOH HOH . 
H 4 HOH B 19 431 431 HOH HOH . 
H 4 HOH B 20 432 432 HOH HOH . 
H 4 HOH B 21 433 433 HOH HOH . 
H 4 HOH B 22 434 434 HOH HOH . 
H 4 HOH B 23 436 436 HOH HOH . 
H 4 HOH B 24 438 438 HOH HOH . 
H 4 HOH B 25 440 440 HOH HOH . 
H 4 HOH B 26 442 442 HOH HOH . 
H 4 HOH B 27 443 443 HOH HOH . 
H 4 HOH B 28 444 444 HOH HOH . 
H 4 HOH B 29 445 445 HOH HOH . 
H 4 HOH B 30 446 446 HOH HOH . 
H 4 HOH B 31 450 450 HOH HOH . 
H 4 HOH B 32 452 452 HOH HOH . 
H 4 HOH B 33 456 456 HOH HOH . 
H 4 HOH B 34 458 458 HOH HOH . 
H 4 HOH B 35 460 460 HOH HOH . 
H 4 HOH B 36 461 461 HOH HOH . 
H 4 HOH B 37 463 463 HOH HOH . 
H 4 HOH B 38 469 469 HOH HOH . 
H 4 HOH B 39 470 470 HOH HOH . 
H 4 HOH B 40 472 472 HOH HOH . 
H 4 HOH B 41 473 473 HOH HOH . 
H 4 HOH B 42 474 474 HOH HOH . 
H 4 HOH B 43 475 475 HOH HOH . 
H 4 HOH B 44 479 479 HOH HOH . 
H 4 HOH B 45 480 480 HOH HOH . 
H 4 HOH B 46 487 487 HOH HOH . 
H 4 HOH B 47 488 488 HOH HOH . 
H 4 HOH B 48 490 490 HOH HOH . 
H 4 HOH B 49 491 491 HOH HOH . 
H 4 HOH B 50 492 492 HOH HOH . 
H 4 HOH B 51 493 493 HOH HOH . 
H 4 HOH B 52 494 494 HOH HOH . 
H 4 HOH B 53 495 495 HOH HOH . 
H 4 HOH B 54 496 496 HOH HOH . 
H 4 HOH B 55 497 497 HOH HOH . 
H 4 HOH B 56 498 498 HOH HOH . 
H 4 HOH B 57 503 503 HOH HOH . 
H 4 HOH B 58 507 507 HOH HOH . 
H 4 HOH B 59 510 510 HOH HOH . 
H 4 HOH B 60 512 512 HOH HOH . 
H 4 HOH B 61 513 513 HOH HOH . 
H 4 HOH B 62 514 514 HOH HOH . 
H 4 HOH B 63 515 515 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P 2GP . . . D 3 48.208 32.634 1.057 1 24.18 ? P 2GP 105 A 1 
HETATM 2 O O1P 2GP . . . D 3 47.755 33.6 2.12 1 33.27 ? O1P 2GP 105 A 1 
HETATM 3 O O2P 2GP . . . D 3 49.437 33.088 0.305 1 32.81 ? O2P 2GP 105 A 1 
HETATM 4 O O3P 2GP . . . D 3 48.304 31.214 1.557 1 34.58 ? O3P 2GP 105 A 1 
HETATM 5 O O5' 2GP . . . D 3 44.975 31.449 -4.701 1 65 ? O5' 2GP 105 A 1 
HETATM 6 C C5' 2GP . . . D 3 46.189 32.114 -4.401 1 18.58 ? C5' 2GP 105 A 1 
HETATM 7 C C4' 2GP . . . D 3 46.273 32.412 -2.917 1 37.94 ? C4' 2GP 105 A 1 
HETATM 8 O O4' 2GP . . . D 3 45.022 32.022 -2.297 1 32.8 ? O4' 2GP 105 A 1 
HETATM 9 C C3' 2GP . . . D 3 47.341 31.623 -2.18 1 17.58 ? C3' 2GP 105 A 1 
HETATM 10 O O3' 2GP . . . D 3 48.563 32.336 -2.195 1 32.49 ? O3' 2GP 105 A 1 
HETATM 11 C C2' 2GP . . . D 3 46.764 31.509 -0.771 1 59.68 ? C2' 2GP 105 A 1 
HETATM 12 O O2' 2GP . . . D 3 47.036 32.649 -0.004 1 21.97 ? O2' 2GP 105 A 1 
HETATM 13 C C1' 2GP . . . D 3 45.263 31.462 -1.02 1 27.83 ? C1' 2GP 105 A 1 
HETATM 14 N N9 2GP . . . D 3 44.698 30.121 -0.952 1 25.77 ? N9 2GP 105 A 1 
HETATM 15 C C8 2GP . . . D 3 43.553 29.832 -0.246 1 41.06 ? C8 2GP 105 A 1 
HETATM 16 N N7 2GP . . . D 3 43.192 28.582 -0.33 1 16.75 ? N7 2GP 105 A 1 
HETATM 17 C C5 2GP . . . D 3 44.202 27.994 -1.09 1 25.48 ? C5 2GP 105 A 1 
HETATM 18 C C6 2GP . . . D 3 44.383 26.653 -1.485 1 11.62 ? C6 2GP 105 A 1 
HETATM 19 O O6 2GP . . . D 3 43.674 25.678 -1.23 1 36.99 ? O6 2GP 105 A 1 
HETATM 20 N N1 2GP . . . D 3 45.516 26.487 -2.272 1 13.4 ? N1 2GP 105 A 1 
HETATM 21 C C2 2GP . . . D 3 46.372 27.497 -2.637 1 15.54 ? C2 2GP 105 A 1 
HETATM 22 N N2 2GP . . . D 3 47.409 27.153 -3.412 1 34.96 ? N2 2GP 105 A 1 
HETATM 23 N N3 2GP . . . D 3 46.213 28.76 -2.282 1 24 ? N3 2GP 105 A 1 
HETATM 24 C C4 2GP . . . D 3 45.121 28.931 -1.498 1 32.88 ? C4 2GP 105 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           260 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           24 
#