data_1TV7 # _model_server_result.job_id hNStGZKq-oTL0uMFNzZ3lQ _model_server_result.datetime_utc '2024-12-26 20:33:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2402}' # _entry.id 1TV7 # _exptl.entry_id 1TV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TV7 _cell.length_a 48.123 _cell.length_b 102.438 _cell.length_c 191.157 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TV7 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 24 A CYS 24 1_555 D FE1 SF4 . A SF4 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc2 A SG CYS 28 A CYS 28 1_555 D FE3 SF4 . A SF4 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc3 A SG CYS 31 A CYS 31 1_555 D FE2 SF4 . A SF4 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc4 A SG CYS 261 A CYS 261 1_555 E FE1 SF4 . A SF4 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc5 A SG CYS 264 A CYS 264 1_555 E FE3 SF4 . A SF4 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc6 A SG CYS 278 A CYS 278 1_555 E FE2 SF4 . A SF4 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc7 D FE4 SF4 . A SF4 1401 1_555 I O HOH . A HOH 1420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc8 B SG CYS 24 B CYS 24 1_555 G FE1 SF4 . B SF4 2401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc9 B SG CYS 28 B CYS 28 1_555 G FE3 SF4 . B SF4 2401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc10 B SG CYS 31 B CYS 31 1_555 G FE2 SF4 . B SF4 2401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc11 B SG CYS 261 B CYS 261 1_555 H FE1 SF4 . B SF4 2402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc12 B SG CYS 264 B CYS 264 1_555 H FE3 SF4 . B SF4 2402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc13 B SG CYS 278 B CYS 278 1_555 H FE2 SF4 . B SF4 2402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 290 n n FE1 S3 SF4 sing 291 n n FE1 S4 SF4 sing 292 n n FE2 S1 SF4 sing 293 n n FE2 S3 SF4 sing 294 n n FE2 S4 SF4 sing 295 n n FE3 S1 SF4 sing 296 n n FE3 S2 SF4 sing 297 n n FE3 S4 SF4 sing 298 n n FE4 S1 SF4 sing 299 n n FE4 S2 SF4 sing 300 n n FE4 S3 SF4 sing 301 n n # _atom_sites.entry_id 1TV7 _atom_sites.fract_transf_matrix[1][1] 0.02078 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009762 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005231 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1403 1403 SO4 SO4 . D 3 SF4 A 1 1401 1401 SF4 FS4 . E 3 SF4 A 1 1402 1402 SF4 FS4 . F 2 SO4 B 1 2403 2403 SO4 SO4 . G 3 SF4 B 1 2401 2401 SF4 FS4 . H 3 SF4 B 1 2402 2402 SF4 FS4 . I 4 HOH A 1 1404 1 HOH HOH . I 4 HOH A 2 1405 3 HOH HOH . I 4 HOH A 3 1406 4 HOH HOH . I 4 HOH A 4 1407 5 HOH HOH . I 4 HOH A 5 1408 6 HOH HOH . I 4 HOH A 6 1409 7 HOH HOH . I 4 HOH A 7 1410 8 HOH HOH . I 4 HOH A 8 1411 9 HOH HOH . I 4 HOH A 9 1412 10 HOH HOH . I 4 HOH A 10 1413 11 HOH HOH . I 4 HOH A 11 1414 12 HOH HOH . I 4 HOH A 12 1415 13 HOH HOH . I 4 HOH A 13 1416 16 HOH HOH . I 4 HOH A 14 1417 17 HOH HOH . I 4 HOH A 15 1418 18 HOH HOH . I 4 HOH A 16 1419 19 HOH HOH . I 4 HOH A 17 1420 21 HOH HOH . I 4 HOH A 18 1421 22 HOH HOH . I 4 HOH A 19 1422 24 HOH HOH . I 4 HOH A 20 1423 28 HOH HOH . I 4 HOH A 21 1424 29 HOH HOH . I 4 HOH A 22 1425 30 HOH HOH . I 4 HOH A 23 1426 31 HOH HOH . I 4 HOH A 24 1427 33 HOH HOH . I 4 HOH A 25 1428 35 HOH HOH . I 4 HOH A 26 1429 36 HOH HOH . I 4 HOH A 27 1430 37 HOH HOH . I 4 HOH A 28 1431 38 HOH HOH . I 4 HOH A 29 1432 42 HOH HOH . I 4 HOH A 30 1433 43 HOH HOH . I 4 HOH A 31 1434 44 HOH HOH . I 4 HOH A 32 1435 45 HOH HOH . I 4 HOH A 33 1436 46 HOH HOH . I 4 HOH A 34 1437 47 HOH HOH . I 4 HOH A 35 1438 48 HOH HOH . I 4 HOH A 36 1439 49 HOH HOH . I 4 HOH A 37 1440 50 HOH HOH . I 4 HOH A 38 1441 51 HOH HOH . I 4 HOH A 39 1442 52 HOH HOH . I 4 HOH A 40 1443 53 HOH HOH . I 4 HOH A 41 1444 55 HOH HOH . I 4 HOH A 42 1445 56 HOH HOH . I 4 HOH A 43 1446 59 HOH HOH . I 4 HOH A 44 1447 60 HOH HOH . I 4 HOH A 45 1448 61 HOH HOH . I 4 HOH A 46 1449 62 HOH HOH . I 4 HOH A 47 1450 63 HOH HOH . I 4 HOH A 48 1451 64 HOH HOH . J 4 HOH B 1 2404 2 HOH HOH . J 4 HOH B 2 2405 14 HOH HOH . J 4 HOH B 3 2406 15 HOH HOH . J 4 HOH B 4 2407 20 HOH HOH . J 4 HOH B 5 2408 23 HOH HOH . J 4 HOH B 6 2409 25 HOH HOH . J 4 HOH B 7 2410 26 HOH HOH . J 4 HOH B 8 2411 27 HOH HOH . J 4 HOH B 9 2412 32 HOH HOH . J 4 HOH B 10 2413 34 HOH HOH . J 4 HOH B 11 2414 39 HOH HOH . J 4 HOH B 12 2415 40 HOH HOH . J 4 HOH B 13 2416 41 HOH HOH . J 4 HOH B 14 2417 54 HOH HOH . J 4 HOH B 15 2418 57 HOH HOH . J 4 HOH B 16 2419 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . H 3 31.823 62.909 42.95 1 33.39 ? FE1 SF4 2402 B 1 HETATM 2 FE FE2 SF4 . . . H 3 32.806 63.203 45.434 1 37.87 ? FE2 SF4 2402 B 1 HETATM 3 FE FE3 SF4 . . . H 3 30.672 61.655 44.958 1 32.88 ? FE3 SF4 2402 B 1 HETATM 4 FE FE4 SF4 . . . H 3 33.058 60.735 44.003 1 40.56 ? FE4 SF4 2402 B 1 HETATM 5 S S1 SF4 . . . H 3 32.439 61.098 46.188 1 35.71 ? S1 SF4 2402 B 1 HETATM 6 S S2 SF4 . . . H 3 31.017 60.811 42.836 1 30.62 ? S2 SF4 2402 B 1 HETATM 7 S S3 SF4 . . . H 3 34.016 62.78 43.509 1 37.54 ? S3 SF4 2402 B 1 HETATM 8 S S4 SF4 . . . H 3 30.751 63.932 44.67 1 34.46 ? S4 SF4 2402 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #