data_1TVV
#
_model_server_result.job_id            jDtJ1iW5N8cr070YdjqOgw 
_model_server_result.datetime_utc      '2024-10-10 21:21:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1tvv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":318}' 
#
_entry.id    1TVV 
#
_exptl.entry_id    1TVV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              477.469 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1TVV 
_cell.length_a            78.7 
_cell.length_b            78.7 
_cell.length_c            230.7 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1TVV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_554 -x+y,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -115.35 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C24 H23 N5 O6' 
_chem_comp.formula_weight    477.469 
_chem_comp.id                CB3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 CB3 sing 70 n y 
N1 C8A CB3 sing 71 n y 
N1 HN1 CB3 sing 72 n n 
C2 NA2 CB3 sing 73 n n 
C2 N3 CB3 doub 74 n y 
NA2 HN21 CB3 sing 75 n n 
NA2 HN22 CB3 sing 76 n n 
N3 C4 CB3 sing 77 n y 
C4 O4 CB3 doub 78 n n 
C4 C4A CB3 sing 79 n y 
C4A C5 CB3 doub 80 n y 
C4A C8A CB3 sing 81 n y 
C5 C6 CB3 sing 82 n y 
C5 H5 CB3 sing 83 n n 
C6 C7 CB3 doub 84 n y 
C6 C9 CB3 sing 85 n n 
C7 C8 CB3 sing 86 n y 
C7 H7 CB3 sing 87 n n 
C8 C8A CB3 doub 88 n y 
C8 H8 CB3 sing 89 n n 
C9 N10 CB3 sing 90 n n 
C9 H91 CB3 sing 91 n n 
C9 H92 CB3 sing 92 n n 
N10 C14 CB3 sing 93 n n 
N10 CP1 CB3 sing 94 n n 
C11 C12 CB3 doub 95 n y 
C11 C16 CB3 sing 96 n y 
C11 C CB3 sing 97 n n 
C12 C13 CB3 sing 98 n y 
C12 H12 CB3 sing 99 n n 
C13 C14 CB3 doub 100 n y 
C13 H13 CB3 sing 101 n n 
C14 C15 CB3 sing 102 n y 
C15 C16 CB3 doub 103 n y 
C15 H15 CB3 sing 104 n n 
C16 H16 CB3 sing 105 n n 
C O CB3 doub 106 n n 
C N CB3 sing 107 n n 
N CA CB3 sing 108 n n 
N HN CB3 sing 109 n n 
CA CB CB3 sing 110 n n 
CA CT CB3 sing 111 n n 
CA HA CB3 sing 112 n n 
CB CG CB3 sing 113 n n 
CB HB1 CB3 sing 114 n n 
CB HB2 CB3 sing 115 n n 
CG CD CB3 sing 116 n n 
CG HG1 CB3 sing 117 n n 
CG HG2 CB3 sing 118 n n 
CD OE1 CB3 doub 119 n n 
CD OE2 CB3 sing 120 n n 
OE2 HOE2 CB3 sing 121 n n 
CT O1 CB3 doub 122 n n 
CT O2 CB3 sing 123 n n 
O2 HO2 CB3 sing 124 n n 
CP1 CP2 CB3 sing 125 n n 
CP1 HP11 CB3 sing 126 n n 
CP1 HP12 CB3 sing 127 n n 
CP2 CP3 CB3 trip 128 n n 
CP3 HP3 CB3 sing 129 n n 
#
_atom_sites.entry_id                     1TVV 
_atom_sites.fract_transf_matrix[1][1]    0.012706 
_atom_sites.fract_transf_matrix[1][2]    0.007336 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014672 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004335 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 UMP A 1 317 317 UMP UMP . 
C 3 CB3 A 1 318 318 CB3 CB3 . 
D 4 HOH A 1 319 319 HOH HOH . 
D 4 HOH A 2 320 320 HOH HOH . 
D 4 HOH A 3 321 321 HOH HOH . 
D 4 HOH A 4 322 322 HOH HOH . 
D 4 HOH A 5 323 323 HOH HOH . 
D 4 HOH A 6 324 324 HOH HOH . 
D 4 HOH A 7 325 325 HOH HOH . 
D 4 HOH A 8 326 326 HOH HOH . 
D 4 HOH A 9 327 327 HOH HOH . 
D 4 HOH A 10 328 328 HOH HOH . 
D 4 HOH A 11 329 329 HOH HOH . 
D 4 HOH A 12 330 330 HOH HOH . 
D 4 HOH A 13 331 331 HOH HOH . 
D 4 HOH A 14 332 332 HOH HOH . 
D 4 HOH A 15 333 333 HOH HOH . 
D 4 HOH A 16 334 334 HOH HOH . 
D 4 HOH A 17 335 335 HOH HOH . 
D 4 HOH A 18 336 336 HOH HOH . 
D 4 HOH A 19 337 337 HOH HOH . 
D 4 HOH A 20 338 338 HOH HOH . 
D 4 HOH A 21 339 339 HOH HOH . 
D 4 HOH A 22 340 340 HOH HOH . 
D 4 HOH A 23 341 341 HOH HOH . 
D 4 HOH A 24 342 342 HOH HOH . 
D 4 HOH A 25 343 343 HOH HOH . 
D 4 HOH A 26 344 344 HOH HOH . 
D 4 HOH A 27 345 345 HOH HOH . 
D 4 HOH A 28 346 346 HOH HOH . 
D 4 HOH A 29 347 347 HOH HOH . 
D 4 HOH A 30 348 348 HOH HOH . 
D 4 HOH A 31 349 349 HOH HOH . 
D 4 HOH A 32 350 350 HOH HOH . 
D 4 HOH A 33 351 351 HOH HOH . 
D 4 HOH A 34 352 352 HOH HOH . 
D 4 HOH A 35 353 353 HOH HOH . 
D 4 HOH A 36 354 354 HOH HOH . 
D 4 HOH A 37 356 356 HOH HOH . 
D 4 HOH A 38 359 359 HOH HOH . 
D 4 HOH A 39 369 369 HOH HOH . 
D 4 HOH A 40 373 373 HOH HOH . 
D 4 HOH A 41 374 374 HOH HOH . 
D 4 HOH A 42 376 376 HOH HOH . 
D 4 HOH A 43 378 378 HOH HOH . 
D 4 HOH A 44 380 380 HOH HOH . 
D 4 HOH A 45 383 383 HOH HOH . 
D 4 HOH A 46 389 389 HOH HOH . 
D 4 HOH A 47 390 390 HOH HOH . 
D 4 HOH A 48 400 400 HOH HOH . 
D 4 HOH A 49 402 402 HOH HOH . 
D 4 HOH A 50 405 405 HOH HOH . 
D 4 HOH A 51 406 406 HOH HOH . 
D 4 HOH A 52 407 407 HOH HOH . 
D 4 HOH A 53 413 413 HOH HOH . 
D 4 HOH A 54 414 414 HOH HOH . 
D 4 HOH A 55 415 415 HOH HOH . 
D 4 HOH A 56 416 416 HOH HOH . 
D 4 HOH A 57 417 417 HOH HOH . 
D 4 HOH A 58 418 418 HOH HOH . 
D 4 HOH A 59 419 419 HOH HOH . 
D 4 HOH A 60 425 425 HOH HOH . 
D 4 HOH A 61 426 426 HOH HOH . 
D 4 HOH A 62 428 428 HOH HOH . 
D 4 HOH A 63 429 429 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 CB3 . . . C 3 19.453 47.558 -52.451 1 80.39 ? N1 CB3 318 A 1 
HETATM 2 C C2 CB3 . . . C 3 19.309 46.203 -52.505 1 79.96 ? C2 CB3 318 A 1 
HETATM 3 N NA2 CB3 . . . C 3 19.847 45.449 -53.441 1 78.58 ? NA2 CB3 318 A 1 
HETATM 4 N N3 CB3 . . . C 3 18.566 45.545 -51.59 1 80.56 ? N3 CB3 318 A 1 
HETATM 5 C C4 CB3 . . . C 3 17.941 46.198 -50.587 1 81.86 ? C4 CB3 318 A 1 
HETATM 6 O O4 CB3 . . . C 3 17.293 45.46 -49.602 1 83.22 ? O4 CB3 318 A 1 
HETATM 7 C C4A CB3 . . . C 3 17.979 47.604 -50.562 1 81.17 ? C4A CB3 318 A 1 
HETATM 8 C C5 CB3 . . . C 3 17.247 48.319 -49.623 1 80.05 ? C5 CB3 318 A 1 
HETATM 9 C C6 CB3 . . . C 3 17.264 49.72 -49.584 1 81.21 ? C6 CB3 318 A 1 
HETATM 10 C C7 CB3 . . . C 3 18.043 50.41 -50.539 1 81.72 ? C7 CB3 318 A 1 
HETATM 11 C C8 CB3 . . . C 3 18.801 49.707 -51.505 1 81.14 ? C8 CB3 318 A 1 
HETATM 12 C C8A CB3 . . . C 3 18.77 48.29 -51.523 1 81.13 ? C8A CB3 318 A 1 
HETATM 13 C C9 CB3 . . . C 3 16.698 50.408 -48.399 1 82.01 ? C9 CB3 318 A 1 
HETATM 14 N N10 CB3 . . . C 3 16.549 49.458 -47.26 1 85.74 ? N10 CB3 318 A 1 
HETATM 15 C C11 CB3 . . . C 3 19.996 48.224 -45.163 1 92.98 ? C11 CB3 318 A 1 
HETATM 16 C C12 CB3 . . . C 3 18.807 47.451 -45.094 1 92.16 ? C12 CB3 318 A 1 
HETATM 17 C C13 CB3 . . . C 3 17.663 47.863 -45.796 1 90.9 ? C13 CB3 318 A 1 
HETATM 18 C C14 CB3 . . . C 3 17.673 49.046 -46.581 1 89.32 ? C14 CB3 318 A 1 
HETATM 19 C C15 CB3 . . . C 3 18.889 49.787 -46.667 1 92.12 ? C15 CB3 318 A 1 
HETATM 20 C C16 CB3 . . . C 3 20.043 49.384 -45.971 1 93.31 ? C16 CB3 318 A 1 
HETATM 21 C C CB3 . . . C 3 21.138 47.91 -44.329 1 91.97 ? C CB3 318 A 1 
HETATM 22 O O CB3 . . . C 3 22.118 48.65 -44.218 1 91.16 ? O CB3 318 A 1 
HETATM 23 N N CB3 . . . C 3 21.104 46.768 -43.663 1 91.72 ? N CB3 318 A 1 
HETATM 24 C CA CB3 . . . C 3 21.583 45.535 -44.296 1 91.48 ? CA CB3 318 A 1 
HETATM 25 C CB CB3 . . . C 3 23.112 45.448 -44.262 1 91.3 ? CB CB3 318 A 1 
HETATM 26 C CG CB3 . . . C 3 23.737 45.743 -42.908 1 92.52 ? CG CB3 318 A 1 
HETATM 27 C CD CB3 . . . C 3 25.25 45.668 -42.944 1 93.35 ? CD CB3 318 A 1 
HETATM 28 O OE1 CB3 . . . C 3 25.869 46.393 -43.759 1 92.13 ? OE1 CB3 318 A 1 
HETATM 29 O OE2 CB3 . . . C 3 25.82 44.871 -42.167 1 94.72 ? OE2 CB3 318 A 1 
HETATM 30 C CT CB3 . . . C 3 20.953 44.318 -43.627 1 91.76 ? CT CB3 318 A 1 
HETATM 31 O O1 CB3 . . . C 3 20.015 44.517 -42.821 1 92.08 ? O1 CB3 318 A 1 
HETATM 32 O O2 CB3 . . . C 3 21.393 43.187 -43.928 1 92.09 ? O2 CB3 318 A 1 
HETATM 33 C CP1 CB3 . . . C 3 15.204 48.892 -46.985 1 82.98 ? CP1 CB3 318 A 1 
HETATM 34 C CP2 CB3 . . . C 3 15.213 47.809 -45.99 1 80.74 ? CP2 CB3 318 A 1 
HETATM 35 C CP3 CB3 . . . C 3 15.223 46.929 -45.172 1 77.47 ? CP3 CB3 318 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           35 
#