data_1TW2 # _model_server_result.job_id Lx25gEGG9l0ZPtYjftHCDw _model_server_result.datetime_utc '2024-11-26 23:21:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tw2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":635}' # _entry.id 1TW2 # _exptl.entry_id 1TW2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 384.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-ADENOSYL-L-HOMOCYSTEINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TW2 _cell.length_a 60.682 _cell.length_b 102.582 _cell.length_c 124.256 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TW2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C14 H20 N6 O5 S' _chem_comp.formula_weight 384.411 _chem_comp.id SAH _chem_comp.mon_nstd_flag n _chem_comp.name S-ADENOSYL-L-HOMOCYSTEINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SAH sing 361 n n N HN1 SAH sing 362 n n N HN2 SAH sing 363 n n CA CB SAH sing 364 n n CA C SAH sing 365 n n CA HA SAH sing 366 n n CB CG SAH sing 367 n n CB HB1 SAH sing 368 n n CB HB2 SAH sing 369 n n CG SD SAH sing 370 n n CG HG1 SAH sing 371 n n CG HG2 SAH sing 372 n n SD C5' SAH sing 373 n n C O SAH doub 374 n n C OXT SAH sing 375 n n OXT HXT SAH sing 376 n n C5' C4' SAH sing 377 n n C5' "H5'1" SAH sing 378 n n C5' "H5'2" SAH sing 379 n n C4' O4' SAH sing 380 n n C4' C3' SAH sing 381 n n C4' H4' SAH sing 382 n n O4' C1' SAH sing 383 n n C3' O3' SAH sing 384 n n C3' C2' SAH sing 385 n n C3' H3' SAH sing 386 n n O3' HO3' SAH sing 387 n n C2' O2' SAH sing 388 n n C2' C1' SAH sing 389 n n C2' H2' SAH sing 390 n n O2' HO2' SAH sing 391 n n C1' N9 SAH sing 392 n n C1' H1' SAH sing 393 n n N9 C8 SAH sing 394 n y N9 C4 SAH sing 395 n y C8 N7 SAH doub 396 n y C8 H8 SAH sing 397 n n N7 C5 SAH sing 398 n y C5 C6 SAH sing 399 n y C5 C4 SAH doub 400 n y C6 N6 SAH sing 401 n n C6 N1 SAH doub 402 n y N6 HN61 SAH sing 403 n n N6 HN62 SAH sing 404 n n N1 C2 SAH sing 405 n y C2 N3 SAH doub 406 n y C2 H2 SAH sing 407 n n N3 C4 SAH sing 408 n y # _atom_sites.entry_id 1TW2 _atom_sites.fract_transf_matrix[1][1] 0.016479 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008048 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 635 635 SAH SIM . D 3 ERT A 1 600 600 ERT AKN . E 2 SAH B 1 1635 635 SAH SIM . F 3 ERT B 1 1600 600 ERT AKN . G 4 HOH A 1 636 1 HOH WAT . G 4 HOH A 2 637 3 HOH WAT . G 4 HOH A 3 638 5 HOH WAT . G 4 HOH A 4 639 18 HOH WAT . G 4 HOH A 5 640 19 HOH WAT . G 4 HOH A 6 641 21 HOH WAT . G 4 HOH A 7 642 23 HOH WAT . G 4 HOH A 8 643 24 HOH WAT . G 4 HOH A 9 644 28 HOH WAT . G 4 HOH A 10 645 31 HOH WAT . G 4 HOH A 11 646 35 HOH WAT . G 4 HOH A 12 647 37 HOH WAT . G 4 HOH A 13 648 41 HOH WAT . G 4 HOH A 14 649 46 HOH WAT . G 4 HOH A 15 650 47 HOH WAT . G 4 HOH A 16 651 48 HOH WAT . G 4 HOH A 17 652 54 HOH WAT . G 4 HOH A 18 653 58 HOH WAT . G 4 HOH A 19 654 60 HOH WAT . G 4 HOH A 20 655 66 HOH WAT . G 4 HOH A 21 656 75 HOH WAT . G 4 HOH A 22 657 79 HOH WAT . G 4 HOH A 23 658 80 HOH WAT . G 4 HOH A 24 659 82 HOH WAT . G 4 HOH A 25 660 84 HOH WAT . G 4 HOH A 26 661 89 HOH WAT . G 4 HOH A 27 662 95 HOH WAT . G 4 HOH A 28 663 96 HOH WAT . G 4 HOH A 29 664 102 HOH WAT . G 4 HOH A 30 665 103 HOH WAT . G 4 HOH A 31 666 109 HOH WAT . G 4 HOH A 32 667 121 HOH WAT . G 4 HOH A 33 668 125 HOH WAT . G 4 HOH A 34 669 128 HOH WAT . G 4 HOH A 35 670 140 HOH WAT . G 4 HOH A 36 671 143 HOH WAT . G 4 HOH A 37 672 150 HOH WAT . G 4 HOH A 38 673 151 HOH WAT . G 4 HOH A 39 674 158 HOH WAT . G 4 HOH A 40 675 161 HOH WAT . G 4 HOH A 41 676 172 HOH WAT . G 4 HOH A 42 677 175 HOH WAT . G 4 HOH A 43 678 188 HOH WAT . G 4 HOH A 44 679 189 HOH WAT . G 4 HOH A 45 680 213 HOH WAT . G 4 HOH A 46 681 4 HOH WAT . G 4 HOH A 47 682 7 HOH WAT . G 4 HOH A 48 683 8 HOH WAT . G 4 HOH A 49 684 9 HOH WAT . G 4 HOH A 50 685 10 HOH WAT . G 4 HOH A 51 686 12 HOH WAT . G 4 HOH A 52 687 15 HOH WAT . G 4 HOH A 53 688 17 HOH WAT . G 4 HOH A 54 689 19 HOH WAT . G 4 HOH A 55 690 20 HOH WAT . G 4 HOH A 56 691 25 HOH WAT . G 4 HOH A 57 692 26 HOH WAT . G 4 HOH A 58 693 27 HOH WAT . G 4 HOH A 59 694 31 HOH WAT . G 4 HOH A 60 695 34 HOH WAT . G 4 HOH A 61 696 38 HOH WAT . G 4 HOH A 62 697 39 HOH WAT . G 4 HOH A 63 698 41 HOH WAT . G 4 HOH A 64 699 47 HOH WAT . G 4 HOH A 65 700 49 HOH WAT . G 4 HOH A 66 701 50 HOH WAT . G 4 HOH A 67 702 54 HOH WAT . G 4 HOH A 68 703 56 HOH WAT . G 4 HOH A 69 704 59 HOH WAT . G 4 HOH A 70 705 60 HOH WAT . G 4 HOH A 71 706 63 HOH WAT . G 4 HOH A 72 707 64 HOH WAT . G 4 HOH A 73 708 65 HOH WAT . G 4 HOH A 74 709 68 HOH WAT . G 4 HOH A 75 710 69 HOH WAT . G 4 HOH A 76 711 74 HOH WAT . G 4 HOH A 77 712 76 HOH WAT . G 4 HOH A 78 713 84 HOH WAT . G 4 HOH A 79 714 85 HOH WAT . G 4 HOH A 80 715 86 HOH WAT . G 4 HOH A 81 716 99 HOH WAT . G 4 HOH A 82 717 136 HOH WAT . G 4 HOH A 83 718 158 HOH WAT . G 4 HOH A 84 719 160 HOH WAT . G 4 HOH A 85 720 161 HOH WAT . G 4 HOH A 86 721 162 HOH WAT . G 4 HOH A 87 722 163 HOH WAT . G 4 HOH A 88 723 165 HOH WAT . G 4 HOH A 89 724 166 HOH WAT . G 4 HOH A 90 725 167 HOH WAT . G 4 HOH A 91 726 168 HOH WAT . G 4 HOH A 92 727 169 HOH WAT . G 4 HOH A 93 728 170 HOH WAT . G 4 HOH A 94 729 171 HOH WAT . G 4 HOH A 95 730 172 HOH WAT . G 4 HOH A 96 731 173 HOH WAT . G 4 HOH A 97 732 176 HOH WAT . H 4 HOH B 1 1636 4 HOH WAT . H 4 HOH B 2 1637 6 HOH WAT . H 4 HOH B 3 1638 8 HOH WAT . H 4 HOH B 4 1639 9 HOH WAT . H 4 HOH B 5 1640 10 HOH WAT . H 4 HOH B 6 1641 11 HOH WAT . H 4 HOH B 7 1642 13 HOH WAT . H 4 HOH B 8 1643 14 HOH WAT . H 4 HOH B 9 1644 15 HOH WAT . H 4 HOH B 10 1645 16 HOH WAT . H 4 HOH B 11 1646 22 HOH WAT . H 4 HOH B 12 1647 25 HOH WAT . H 4 HOH B 13 1648 26 HOH WAT . H 4 HOH B 14 1649 32 HOH WAT . H 4 HOH B 15 1650 33 HOH WAT . H 4 HOH B 16 1651 39 HOH WAT . H 4 HOH B 17 1652 40 HOH WAT . H 4 HOH B 18 1653 42 HOH WAT . H 4 HOH B 19 1654 50 HOH WAT . H 4 HOH B 20 1655 52 HOH WAT . H 4 HOH B 21 1656 61 HOH WAT . H 4 HOH B 22 1657 62 HOH WAT . H 4 HOH B 23 1658 72 HOH WAT . H 4 HOH B 24 1659 73 HOH WAT . H 4 HOH B 25 1660 77 HOH WAT . H 4 HOH B 26 1661 88 HOH WAT . H 4 HOH B 27 1662 93 HOH WAT . H 4 HOH B 28 1663 101 HOH WAT . H 4 HOH B 29 1664 107 HOH WAT . H 4 HOH B 30 1665 120 HOH WAT . H 4 HOH B 31 1666 126 HOH WAT . H 4 HOH B 32 1667 186 HOH WAT . H 4 HOH B 33 1668 187 HOH WAT . H 4 HOH B 34 1669 190 HOH WAT . H 4 HOH B 35 1670 207 HOH WAT . H 4 HOH B 36 1671 6 HOH WAT . H 4 HOH B 37 1672 11 HOH WAT . H 4 HOH B 38 1673 13 HOH WAT . H 4 HOH B 39 1674 14 HOH WAT . H 4 HOH B 40 1675 18 HOH WAT . H 4 HOH B 41 1676 21 HOH WAT . H 4 HOH B 42 1677 24 HOH WAT . H 4 HOH B 43 1678 28 HOH WAT . H 4 HOH B 44 1679 29 HOH WAT . H 4 HOH B 45 1680 30 HOH WAT . H 4 HOH B 46 1681 35 HOH WAT . H 4 HOH B 47 1682 36 HOH WAT . H 4 HOH B 48 1683 42 HOH WAT . H 4 HOH B 49 1684 43 HOH WAT . H 4 HOH B 50 1685 48 HOH WAT . H 4 HOH B 51 1686 51 HOH WAT . H 4 HOH B 52 1687 52 HOH WAT . H 4 HOH B 53 1688 53 HOH WAT . H 4 HOH B 54 1689 57 HOH WAT . H 4 HOH B 55 1690 58 HOH WAT . H 4 HOH B 56 1691 66 HOH WAT . H 4 HOH B 57 1692 67 HOH WAT . H 4 HOH B 58 1693 75 HOH WAT . H 4 HOH B 59 1694 77 HOH WAT . H 4 HOH B 60 1695 80 HOH WAT . H 4 HOH B 61 1696 83 HOH WAT . H 4 HOH B 62 1697 98 HOH WAT . H 4 HOH B 63 1698 146 HOH WAT . H 4 HOH B 64 1699 164 HOH WAT . H 4 HOH B 65 1700 174 HOH WAT . H 4 HOH B 66 1701 175 HOH WAT . H 4 HOH B 67 1702 177 HOH WAT . H 4 HOH B 68 1703 178 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SAH . . . C 2 16.402 73.367 11.861 1 20.98 ? N SAH 635 A 1 HETATM 2 C CA SAH . . . C 2 16.453 71.917 11.774 1 21.17 ? CA SAH 635 A 1 HETATM 3 C CB SAH . . . C 2 17.757 71.598 11.058 1 21.52 ? CB SAH 635 A 1 HETATM 4 C CG SAH . . . C 2 17.613 70.435 10.119 1 21.84 ? CG SAH 635 A 1 HETATM 5 S SD SAH . . . C 2 19.139 70.109 9.548 1 22.43 ? SD SAH 635 A 1 HETATM 6 C C SAH . . . C 2 16.52 71.325 13.145 1 20.77 ? C SAH 635 A 1 HETATM 7 O O SAH . . . C 2 17.141 71.949 13.992 1 21.01 ? O SAH 635 A 1 HETATM 8 O OXT SAH . . . C 2 16.001 70.254 13.423 1 20.3 ? OXT SAH 635 A 1 HETATM 9 C C5' SAH . . . C 2 19.764 71.236 8.476 1 21.7 ? C5' SAH 635 A 1 HETATM 10 C C4' SAH . . . C 2 18.766 71.552 7.356 1 20.69 ? C4' SAH 635 A 1 HETATM 11 O O4' SAH . . . C 2 19.154 72.593 6.44 1 20.56 ? O4' SAH 635 A 1 HETATM 12 C C3' SAH . . . C 2 18.349 70.362 6.518 1 18.59 ? C3' SAH 635 A 1 HETATM 13 O O3' SAH . . . C 2 17.014 70.082 6.818 1 15.39 ? O3' SAH 635 A 1 HETATM 14 C C2' SAH . . . C 2 18.444 70.784 5.07 1 19.48 ? C2' SAH 635 A 1 HETATM 15 O O2' SAH . . . C 2 17.243 70.575 4.345 1 21.28 ? O2' SAH 635 A 1 HETATM 16 C C1' SAH . . . C 2 18.809 72.257 5.102 1 19.67 ? C1' SAH 635 A 1 HETATM 17 N N9 SAH . . . C 2 19.68 72.764 4.016 1 20.62 ? N9 SAH 635 A 1 HETATM 18 C C8 SAH . . . C 2 20.89 72.342 3.597 1 21.53 ? C8 SAH 635 A 1 HETATM 19 N N7 SAH . . . C 2 21.297 73.098 2.546 1 21.55 ? N7 SAH 635 A 1 HETATM 20 C C5 SAH . . . C 2 20.335 74.005 2.3 1 20.96 ? C5 SAH 635 A 1 HETATM 21 C C6 SAH . . . C 2 20.187 75.105 1.324 1 20.42 ? C6 SAH 635 A 1 HETATM 22 N N6 SAH . . . C 2 21.147 75.361 0.435 1 18.29 ? N6 SAH 635 A 1 HETATM 23 N N1 SAH . . . C 2 19.065 75.813 1.416 1 20.7 ? N1 SAH 635 A 1 HETATM 24 C C2 SAH . . . C 2 17.961 75.61 2.36 1 20.96 ? C2 SAH 635 A 1 HETATM 25 N N3 SAH . . . C 2 18.209 74.501 3.282 1 20.91 ? N3 SAH 635 A 1 HETATM 26 C C4 SAH . . . C 2 19.363 73.765 3.215 1 20.17 ? C4 SAH 635 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 26 #