data_1TY8
#
_model_server_result.job_id            U68sb40-fKoKLen9MKpIiA 
_model_server_result.datetime_utc      '2024-12-27 03:15:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ty8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    1TY8 
#
_exptl.entry_id    1TY8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.75 
_cell.angle_gamma         90 
_cell.entry_id            1TY8 
_cell.length_a            107.948 
_cell.length_b            38.054 
_cell.length_c            63.137 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1TY8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PQS monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1,2 
A,B,C,D,E,F 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 107.948 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 128 A CYS 128 1_555 A SG CYS 136 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc1 A O PRO 78 A PRO 78 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? 
metalc ? metalc2 A O PRO 78 A PRO 78 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? 
metalc ? metalc3 A O GLY 79 A GLY 79 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? 
metalc ? metalc4 A OG1 THR 148 A THR 148 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? 
metalc ? metalc5 E O1A ADP . A ADP 285 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc6 E O2B ADP . A ADP 285 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.836 ? 
metalc ? metalc7 B NA NA . A NA 301 1_555 F O HOH . A HOH 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1TY8 
_atom_sites.fract_transf_matrix[1][1]    0.009264 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003696 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.026278 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017053 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 301 1 NA NA1 . 
C 2 NA A 1 302 2 NA NA1 . 
D 3 CL A 1 303 3 CL CL1 . 
E 4 ADP A 1 285 285 ADP ADP . 
F 5 HOH A 1 304 1 HOH TIP . 
F 5 HOH A 2 305 2 HOH TIP . 
F 5 HOH A 3 306 3 HOH TIP . 
F 5 HOH A 4 307 4 HOH TIP . 
F 5 HOH A 5 308 5 HOH TIP . 
F 5 HOH A 6 309 6 HOH TIP . 
F 5 HOH A 7 310 7 HOH TIP . 
F 5 HOH A 8 311 8 HOH TIP . 
F 5 HOH A 9 312 9 HOH TIP . 
F 5 HOH A 10 313 10 HOH TIP . 
F 5 HOH A 11 314 11 HOH TIP . 
F 5 HOH A 12 315 12 HOH TIP . 
F 5 HOH A 13 316 13 HOH TIP . 
F 5 HOH A 14 317 14 HOH TIP . 
F 5 HOH A 15 318 15 HOH TIP . 
F 5 HOH A 16 319 16 HOH TIP . 
F 5 HOH A 17 320 17 HOH TIP . 
F 5 HOH A 18 321 18 HOH TIP . 
F 5 HOH A 19 322 19 HOH TIP . 
F 5 HOH A 20 323 20 HOH TIP . 
F 5 HOH A 21 324 21 HOH TIP . 
F 5 HOH A 22 325 22 HOH TIP . 
F 5 HOH A 23 326 23 HOH TIP . 
F 5 HOH A 24 327 24 HOH TIP . 
F 5 HOH A 25 328 25 HOH TIP . 
F 5 HOH A 26 329 26 HOH TIP . 
F 5 HOH A 27 330 27 HOH TIP . 
F 5 HOH A 28 331 28 HOH TIP . 
F 5 HOH A 29 332 29 HOH TIP . 
F 5 HOH A 30 333 30 HOH TIP . 
F 5 HOH A 31 334 31 HOH TIP . 
F 5 HOH A 32 335 32 HOH TIP . 
F 5 HOH A 33 336 33 HOH TIP . 
F 5 HOH A 34 337 34 HOH TIP . 
F 5 HOH A 35 338 35 HOH TIP . 
F 5 HOH A 36 339 36 HOH TIP . 
F 5 HOH A 37 340 37 HOH TIP . 
F 5 HOH A 38 341 38 HOH TIP . 
F 5 HOH A 39 342 39 HOH TIP . 
F 5 HOH A 40 343 40 HOH TIP . 
F 5 HOH A 41 344 41 HOH TIP . 
F 5 HOH A 42 345 42 HOH TIP . 
F 5 HOH A 43 346 43 HOH TIP . 
F 5 HOH A 44 347 44 HOH TIP . 
F 5 HOH A 45 348 45 HOH TIP . 
F 5 HOH A 46 349 46 HOH TIP . 
F 5 HOH A 47 350 47 HOH TIP . 
F 5 HOH A 48 351 48 HOH TIP . 
F 5 HOH A 49 352 49 HOH TIP . 
F 5 HOH A 50 353 50 HOH TIP . 
F 5 HOH A 51 354 51 HOH TIP . 
F 5 HOH A 52 355 52 HOH TIP . 
F 5 HOH A 53 356 53 HOH TIP . 
F 5 HOH A 54 357 54 HOH TIP . 
F 5 HOH A 55 358 55 HOH TIP . 
F 5 HOH A 56 359 56 HOH TIP . 
F 5 HOH A 57 360 57 HOH TIP . 
F 5 HOH A 58 361 58 HOH TIP . 
F 5 HOH A 59 362 59 HOH TIP . 
F 5 HOH A 60 363 60 HOH TIP . 
F 5 HOH A 61 364 61 HOH TIP . 
F 5 HOH A 62 365 62 HOH TIP . 
F 5 HOH A 63 366 63 HOH TIP . 
F 5 HOH A 64 367 64 HOH TIP . 
F 5 HOH A 65 368 65 HOH TIP . 
F 5 HOH A 66 369 66 HOH TIP . 
F 5 HOH A 67 370 67 HOH TIP . 
F 5 HOH A 68 371 68 HOH TIP . 
F 5 HOH A 69 372 69 HOH TIP . 
F 5 HOH A 70 373 70 HOH TIP . 
F 5 HOH A 71 374 71 HOH TIP . 
F 5 HOH A 72 375 72 HOH TIP . 
F 5 HOH A 73 376 73 HOH TIP . 
F 5 HOH A 74 377 74 HOH TIP . 
F 5 HOH A 75 378 75 HOH TIP . 
F 5 HOH A 76 379 76 HOH TIP . 
F 5 HOH A 77 380 77 HOH TIP . 
F 5 HOH A 78 381 78 HOH TIP . 
F 5 HOH A 79 382 79 HOH TIP . 
F 5 HOH A 80 383 80 HOH TIP . 
F 5 HOH A 81 384 81 HOH TIP . 
F 5 HOH A 82 385 82 HOH TIP . 
F 5 HOH A 83 386 83 HOH TIP . 
F 5 HOH A 84 387 84 HOH TIP . 
F 5 HOH A 85 388 85 HOH TIP . 
F 5 HOH A 86 389 86 HOH TIP . 
F 5 HOH A 87 390 87 HOH TIP . 
F 5 HOH A 88 391 88 HOH TIP . 
F 5 HOH A 89 392 89 HOH TIP . 
F 5 HOH A 90 393 90 HOH TIP . 
F 5 HOH A 91 394 91 HOH TIP . 
F 5 HOH A 92 395 92 HOH TIP . 
F 5 HOH A 93 396 93 HOH TIP . 
F 5 HOH A 94 397 94 HOH TIP . 
F 5 HOH A 95 398 95 HOH TIP . 
F 5 HOH A 96 399 96 HOH TIP . 
F 5 HOH A 97 400 97 HOH TIP . 
F 5 HOH A 98 401 98 HOH TIP . 
F 5 HOH A 99 402 99 HOH TIP . 
F 5 HOH A 100 403 100 HOH TIP . 
F 5 HOH A 101 404 101 HOH TIP . 
F 5 HOH A 102 405 102 HOH TIP . 
F 5 HOH A 103 406 103 HOH TIP . 
F 5 HOH A 104 407 104 HOH TIP . 
F 5 HOH A 105 408 105 HOH TIP . 
F 5 HOH A 106 409 106 HOH TIP . 
F 5 HOH A 107 410 107 HOH TIP . 
F 5 HOH A 108 411 108 HOH TIP . 
F 5 HOH A 109 412 109 HOH TIP . 
F 5 HOH A 110 413 110 HOH TIP . 
F 5 HOH A 111 414 111 HOH TIP . 
F 5 HOH A 112 415 112 HOH TIP . 
F 5 HOH A 113 416 113 HOH TIP . 
F 5 HOH A 114 417 114 HOH TIP . 
F 5 HOH A 115 418 115 HOH TIP . 
F 5 HOH A 116 419 116 HOH TIP . 
F 5 HOH A 117 420 117 HOH TIP . 
F 5 HOH A 118 421 118 HOH TIP . 
F 5 HOH A 119 422 119 HOH TIP . 
F 5 HOH A 120 423 120 HOH TIP . 
F 5 HOH A 121 424 121 HOH TIP . 
F 5 HOH A 122 425 122 HOH TIP . 
F 5 HOH A 123 426 123 HOH TIP . 
F 5 HOH A 124 427 124 HOH TIP . 
F 5 HOH A 125 428 125 HOH TIP . 
F 5 HOH A 126 429 126 HOH TIP . 
F 5 HOH A 127 430 127 HOH TIP . 
F 5 HOH A 128 431 128 HOH TIP . 
F 5 HOH A 129 432 129 HOH TIP . 
F 5 HOH A 130 433 130 HOH TIP . 
F 5 HOH A 131 434 131 HOH TIP . 
F 5 HOH A 132 435 132 HOH TIP . 
F 5 HOH A 133 436 133 HOH TIP . 
F 5 HOH A 134 437 134 HOH TIP . 
F 5 HOH A 135 438 135 HOH TIP . 
F 5 HOH A 136 439 136 HOH TIP . 
F 5 HOH A 137 440 137 HOH TIP . 
F 5 HOH A 138 441 138 HOH TIP . 
F 5 HOH A 139 442 139 HOH TIP . 
F 5 HOH A 140 443 140 HOH TIP . 
F 5 HOH A 141 444 141 HOH TIP . 
F 5 HOH A 142 445 142 HOH TIP . 
F 5 HOH A 143 446 143 HOH TIP . 
F 5 HOH A 144 447 144 HOH TIP . 
F 5 HOH A 145 448 145 HOH TIP . 
F 5 HOH A 146 449 146 HOH TIP . 
F 5 HOH A 147 450 147 HOH TIP . 
F 5 HOH A 148 451 148 HOH TIP . 
F 5 HOH A 149 452 149 HOH TIP . 
F 5 HOH A 150 453 150 HOH TIP . 
F 5 HOH A 151 454 151 HOH TIP . 
F 5 HOH A 152 455 152 HOH TIP . 
F 5 HOH A 153 456 153 HOH TIP . 
F 5 HOH A 154 457 154 HOH TIP . 
F 5 HOH A 155 458 155 HOH TIP . 
F 5 HOH A 156 459 156 HOH TIP . 
F 5 HOH A 157 460 157 HOH TIP . 
F 5 HOH A 158 461 158 HOH TIP . 
F 5 HOH A 159 462 159 HOH TIP . 
F 5 HOH A 160 463 160 HOH TIP . 
F 5 HOH A 161 464 161 HOH TIP . 
F 5 HOH A 162 465 162 HOH TIP . 
F 5 HOH A 163 466 163 HOH TIP . 
F 5 HOH A 164 467 164 HOH TIP . 
F 5 HOH A 165 468 165 HOH TIP . 
F 5 HOH A 166 469 166 HOH TIP . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               45.294 
_atom_site.Cartn_y               3.996 
_atom_site.Cartn_z               14.67 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        22.94 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#