data_1TYM # _model_server_result.job_id pSd8exejzD7duU-Le18U9w _model_server_result.datetime_utc '2025-03-06 01:30:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tym # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":32}' # _entry.id 1TYM # _exptl.entry_id 1TYM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1TYM _cell.length_a 80.88 _cell.length_b 80.88 _cell.length_c 37.6 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TYM _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dodecameric 12 software_defined_assembly 3 PISA tetrameric 4 software_defined_assembly 4 PISA tetrameric 4 software_defined_assembly 5 PISA hexameric 6 software_defined_assembly 6 PISA hexameric 6 software_defined_assembly 7 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,I,J 1 1 C,D,F,G,H,K,L 2 1 A,B,C,D,E,F,G,H,I,J,K,L 3 1,2,3 C,D,F,G,H,K,L 4 1 A,B,E,I,J 4 2 A,B,C,D,E,F,G,H,I,J,K,L 5 1 C,D,F,G,H,K,L 6 1,2,3 A,B,E,I,J 7 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 E ZN ZN . B ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc2 B NE2 HIS 10 B HIS 10 2_555 E ZN ZN . B ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc3 B NE2 HIS 10 B HIS 10 3_555 E ZN ZN . B ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc4 E ZN ZN . B ZN 31 1_555 J O HOH . B HOH 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc5 E ZN ZN . B ZN 31 1_555 J O HOH . B HOH 32 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc6 E ZN ZN . B ZN 31 1_555 J O HOH . B HOH 32 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc7 D NE2 HIS 10 D HIS 10 1_555 G ZN ZN . D ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc8 D NE2 HIS 10 D HIS 10 2_555 G ZN ZN . D ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc9 D NE2 HIS 10 D HIS 10 3_555 G ZN ZN . D ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc10 G ZN ZN . D ZN 31 1_555 H CL CL . D CL 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc11 G ZN ZN . D ZN 31 1_555 H CL CL . D CL 32 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc12 G ZN ZN . D ZN 31 1_555 H CL CL . D CL 32 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1TYM _atom_sites.fract_transf_matrix[1][1] 0.012364 _atom_sites.fract_transf_matrix[1][2] 0.007138 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014277 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026596 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN B 1 31 1 ZN ZN . F 4 TYL C 1 100 100 TYL TYL . G 3 ZN D 1 31 1 ZN ZN . H 5 CL D 1 32 2 CL CL . I 6 HOH A 1 22 6 HOH HOH . I 6 HOH A 2 23 14 HOH HOH . I 6 HOH A 3 24 16 HOH HOH . I 6 HOH A 4 25 18 HOH HOH . I 6 HOH A 5 26 19 HOH HOH . I 6 HOH A 6 27 47 HOH HOH . I 6 HOH A 7 28 53 HOH HOH . I 6 HOH A 8 29 56 HOH HOH . I 6 HOH A 9 30 57 HOH HOH . I 6 HOH A 10 31 58 HOH HOH . I 6 HOH A 11 32 62 HOH HOH . I 6 HOH A 12 33 66 HOH HOH . I 6 HOH A 13 34 68 HOH HOH . I 6 HOH A 14 35 84 HOH HOH . I 6 HOH A 15 36 89 HOH HOH . I 6 HOH A 16 37 90 HOH HOH . I 6 HOH A 17 38 94 HOH HOH . I 6 HOH A 18 39 98 HOH HOH . I 6 HOH A 19 40 111 HOH HOH . I 6 HOH A 20 41 113 HOH HOH . I 6 HOH A 21 42 126 HOH HOH . I 6 HOH A 22 43 141 HOH HOH . I 6 HOH A 23 44 154 HOH HOH . I 6 HOH A 24 45 157 HOH HOH . I 6 HOH A 25 46 158 HOH HOH . I 6 HOH A 26 47 160 HOH HOH . I 6 HOH A 27 48 161 HOH HOH . I 6 HOH A 28 49 162 HOH HOH . J 6 HOH B 1 32 1 HOH HOH . J 6 HOH B 2 33 5 HOH HOH . J 6 HOH B 3 34 9 HOH HOH . J 6 HOH B 4 35 15 HOH HOH . J 6 HOH B 5 36 17 HOH HOH . J 6 HOH B 6 37 21 HOH HOH . J 6 HOH B 7 38 23 HOH HOH . J 6 HOH B 8 39 25 HOH HOH . J 6 HOH B 9 40 26 HOH HOH . J 6 HOH B 10 41 28 HOH HOH . J 6 HOH B 11 42 29 HOH HOH . J 6 HOH B 12 43 30 HOH HOH . J 6 HOH B 13 44 32 HOH HOH . J 6 HOH B 14 45 33 HOH HOH . J 6 HOH B 15 46 34 HOH HOH . J 6 HOH B 16 47 39 HOH HOH . J 6 HOH B 17 48 40 HOH HOH . J 6 HOH B 18 49 49 HOH HOH . J 6 HOH B 19 50 51 HOH HOH . J 6 HOH B 20 51 64 HOH HOH . J 6 HOH B 21 52 65 HOH HOH . J 6 HOH B 22 53 86 HOH HOH . J 6 HOH B 23 54 92 HOH HOH . J 6 HOH B 24 55 101 HOH HOH . J 6 HOH B 25 56 114 HOH HOH . J 6 HOH B 26 57 116 HOH HOH . J 6 HOH B 27 58 118 HOH HOH . J 6 HOH B 28 59 123 HOH HOH . J 6 HOH B 29 60 137 HOH HOH . J 6 HOH B 30 61 147 HOH HOH . J 6 HOH B 31 62 151 HOH HOH . J 6 HOH B 32 63 152 HOH HOH . K 6 HOH C 1 101 7 HOH HOH . K 6 HOH C 2 102 8 HOH HOH . K 6 HOH C 3 103 35 HOH HOH . K 6 HOH C 4 104 41 HOH HOH . K 6 HOH C 5 105 42 HOH HOH . K 6 HOH C 6 106 44 HOH HOH . K 6 HOH C 7 107 54 HOH HOH . K 6 HOH C 8 108 55 HOH HOH . K 6 HOH C 9 109 63 HOH HOH . K 6 HOH C 10 110 75 HOH HOH . K 6 HOH C 11 111 121 HOH HOH . K 6 HOH C 12 112 130 HOH HOH . K 6 HOH C 13 113 153 HOH HOH . L 6 HOH D 1 33 2 HOH HOH . L 6 HOH D 2 34 3 HOH HOH . L 6 HOH D 3 35 4 HOH HOH . L 6 HOH D 4 36 10 HOH HOH . L 6 HOH D 5 37 11 HOH HOH . L 6 HOH D 6 38 12 HOH HOH . L 6 HOH D 7 39 13 HOH HOH . L 6 HOH D 8 40 22 HOH HOH . L 6 HOH D 9 41 46 HOH HOH . L 6 HOH D 10 42 50 HOH HOH . L 6 HOH D 11 43 80 HOH HOH . L 6 HOH D 12 44 85 HOH HOH . L 6 HOH D 13 45 87 HOH HOH . L 6 HOH D 14 46 99 HOH HOH . L 6 HOH D 15 47 100 HOH HOH . L 6 HOH D 16 48 105 HOH HOH . L 6 HOH D 17 49 125 HOH HOH . L 6 HOH D 18 50 135 HOH HOH . L 6 HOH D 19 51 139 HOH HOH . L 6 HOH D 20 52 140 HOH HOH . L 6 HOH D 21 53 145 HOH HOH . L 6 HOH D 22 54 155 HOH HOH . L 6 HOH D 23 55 163 HOH HOH . L 6 HOH D 24 56 164 HOH HOH . L 6 HOH D 25 57 165 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z 10.524 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 30.79 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 32 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 144 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 524 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 1 #