data_1TYY # _model_server_result.job_id R9xtm1MavVQBRce8wuXh9Q _model_server_result.datetime_utc '2024-10-10 18:24:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1tyy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":405}' # _entry.id 1TYY # _exptl.entry_id 1TYY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1TYY _cell.length_a 137.43 _cell.length_b 53.987 _cell.length_c 89.485 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TYY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 167 A ARG 147 1_555 A N MSE 168 A MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C MSE 168 A MSE 148 1_555 A N ARG 169 A ARG 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C LYS 184 A LYS 164 1_555 A N MSE 185 A MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 185 A MSE 165 1_555 A N TRP 186 A TRP 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale5 A C ALA 305 A ALA 285 1_555 A N MSE 306 A MSE 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MSE 306 A MSE 286 1_555 A N ALA 307 A ALA 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C ALA 313 A ALA 293 1_555 A N MSE 314 A MSE 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 A C MSE 314 A MSE 294 1_555 A N THR 315 A THR 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? metalc ? metalc1 C K K . A K 404 1_555 A O GLY 312 A GLY 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc2 C K K . A K 404 1_555 A O THR 268 A THR 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc3 C K K . A K 404 1_555 A OD1 ASP 266 A ASP 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.326 ? metalc ? metalc4 C K K . A K 404 1_555 A O ALA 307 A ALA 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.188 ? metalc ? metalc5 C K K . A K 404 1_555 A O ASP 266 A ASP 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc6 D K K . A K 405 1_555 A O ALA 203 A ALA 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc7 D K K . A K 405 1_555 A O GLY 233 A GLY 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.003 ? metalc ? metalc8 D K K . A K 405 1_555 A O ALA 201 A ALA 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc9 D K K . A K 405 1_555 A O ALA 200 A ALA 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.933 ? covale ? covale9 B C ARG 167 B ARG 147 1_555 B N MSE 168 B MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 B C MSE 168 B MSE 148 1_555 B N ARG 169 B ARG 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 B C LYS 184 B LYS 164 1_555 B N MSE 185 B MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 B C MSE 185 B MSE 165 1_555 B N TRP 186 B TRP 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale13 B C ALA 305 B ALA 285 1_555 B N MSE 306 B MSE 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 B C MSE 306 B MSE 286 1_555 B N ALA 307 B ALA 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 B C MSE 314 B MSE 294 1_555 B N THR 315 B THR 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc10 E K K . B K 504 1_555 B O ALA 200 B ALA 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc11 E K K . B K 504 1_555 B O ALA 201 B ALA 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc12 E K K . B K 504 1_555 B O ALA 203 B ALA 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? metalc ? metalc13 E K K . B K 504 1_555 B O GLY 233 B GLY 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? metalc ? metalc14 F K K . B K 505 1_555 B O ALA 307 B ALA 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.379 ? metalc ? metalc15 F K K . B K 505 1_555 B O ASP 266 B ASP 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc16 F K K . B K 505 1_555 B OD2 ASP 266 B ASP 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc17 F K K . B K 505 1_555 B O THR 268 B THR 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc18 F K K . B K 505 1_555 B N THR 268 B THR 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.052 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1TYY _atom_sites.fract_transf_matrix[1][1] 0.007276 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018523 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011175 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K A 1 404 404 K K1 . D 2 K A 1 405 405 K K1 . E 2 K B 1 504 504 K K1 . F 2 K B 1 505 505 K K1 . G 3 HOH A 1 406 1 HOH HOH . G 3 HOH A 2 407 2 HOH HOH . G 3 HOH A 3 408 4 HOH HOH . G 3 HOH A 4 409 10 HOH HOH . G 3 HOH A 5 410 11 HOH HOH . G 3 HOH A 6 411 13 HOH HOH . G 3 HOH A 7 412 14 HOH HOH . G 3 HOH A 8 413 17 HOH HOH . G 3 HOH A 9 414 19 HOH HOH . G 3 HOH A 10 415 20 HOH HOH . G 3 HOH A 11 416 25 HOH HOH . G 3 HOH A 12 417 26 HOH HOH . G 3 HOH A 13 418 27 HOH HOH . G 3 HOH A 14 419 31 HOH HOH . G 3 HOH A 15 420 32 HOH HOH . G 3 HOH A 16 421 34 HOH HOH . G 3 HOH A 17 422 39 HOH HOH . G 3 HOH A 18 423 41 HOH HOH . G 3 HOH A 19 424 42 HOH HOH . G 3 HOH A 20 425 44 HOH HOH . G 3 HOH A 21 426 45 HOH HOH . G 3 HOH A 22 427 48 HOH HOH . G 3 HOH A 23 428 49 HOH HOH . G 3 HOH A 24 429 50 HOH HOH . G 3 HOH A 25 430 51 HOH HOH . G 3 HOH A 26 431 53 HOH HOH . H 3 HOH B 1 506 3 HOH HOH . H 3 HOH B 2 507 5 HOH HOH . H 3 HOH B 3 508 6 HOH HOH . H 3 HOH B 4 509 7 HOH HOH . H 3 HOH B 5 510 8 HOH HOH . H 3 HOH B 6 511 9 HOH HOH . H 3 HOH B 7 512 12 HOH HOH . H 3 HOH B 8 513 15 HOH HOH . H 3 HOH B 9 514 16 HOH HOH . H 3 HOH B 10 515 18 HOH HOH . H 3 HOH B 11 516 21 HOH HOH . H 3 HOH B 12 517 22 HOH HOH . H 3 HOH B 13 518 23 HOH HOH . H 3 HOH B 14 519 24 HOH HOH . H 3 HOH B 15 520 28 HOH HOH . H 3 HOH B 16 521 29 HOH HOH . H 3 HOH B 17 522 30 HOH HOH . H 3 HOH B 18 523 33 HOH HOH . H 3 HOH B 19 524 35 HOH HOH . H 3 HOH B 20 525 36 HOH HOH . H 3 HOH B 21 526 37 HOH HOH . H 3 HOH B 22 527 38 HOH HOH . H 3 HOH B 23 528 40 HOH HOH . H 3 HOH B 24 529 43 HOH HOH . H 3 HOH B 25 530 46 HOH HOH . H 3 HOH B 26 531 47 HOH HOH . H 3 HOH B 27 532 52 HOH HOH . H 3 HOH B 28 533 54 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.801 _atom_site.Cartn_y -7.892 _atom_site.Cartn_z 11.795 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 78.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 405 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #