data_1U11 # _model_server_result.job_id TF3prtFxu5fDCfg1YuG8Hw _model_server_result.datetime_utc '2024-11-23 22:32:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1u11 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 1U11 # _exptl.entry_id 1U11 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1U11 _cell.length_a 99.25 _cell.length_b 99.25 _cell.length_c 164.81 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U11 _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS octameric 8 author_and_software_defined_assembly 1 PISA hexadecameric 16 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1,2,3,4 A,B,C,D,E,F 2 1,2,3,4,5,6,7,8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 99.25 99.25 0 3 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 99.25 0 0 4 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 99.25 0 5 'crystal symmetry operation' 5_653 -x+1,y,-z-2 -1 0 0 0 1 0 0 0 -1 99.25 0 -329.62 6 'crystal symmetry operation' 6_563 x,-y+1,-z-2 1 0 0 0 -1 0 0 0 -1 0 99.25 -329.62 7 'crystal symmetry operation' 7_553 y,x,-z-2 0 1 0 1 0 0 0 0 -1 0 0 -329.62 8 'crystal symmetry operation' 8_663 -y+1,-x+1,-z-2 0 -1 0 -1 0 0 0 0 -1 99.25 99.25 -329.62 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 1U11 _atom_sites.fract_transf_matrix[1][1] 0.010076 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 1001 1001 CIT CIT . D 2 CIT B 1 1002 1002 CIT CIT . E 3 HOH A 1 403 403 HOH HOH . E 3 HOH A 2 406 406 HOH HOH . E 3 HOH A 3 409 409 HOH HOH . E 3 HOH A 4 410 410 HOH HOH . E 3 HOH A 5 411 411 HOH HOH . E 3 HOH A 6 412 412 HOH HOH . E 3 HOH A 7 418 418 HOH HOH . E 3 HOH A 8 419 419 HOH HOH . E 3 HOH A 9 420 420 HOH HOH . E 3 HOH A 10 421 421 HOH HOH . E 3 HOH A 11 422 422 HOH HOH . E 3 HOH A 12 424 424 HOH HOH . E 3 HOH A 13 426 426 HOH HOH . E 3 HOH A 14 427 427 HOH HOH . E 3 HOH A 15 429 429 HOH HOH . E 3 HOH A 16 430 430 HOH HOH . E 3 HOH A 17 432 432 HOH HOH . E 3 HOH A 18 434 434 HOH HOH . E 3 HOH A 19 437 437 HOH HOH . E 3 HOH A 20 439 439 HOH HOH . E 3 HOH A 21 441 441 HOH HOH . E 3 HOH A 22 442 442 HOH HOH . E 3 HOH A 23 443 443 HOH HOH . E 3 HOH A 24 444 444 HOH HOH . E 3 HOH A 25 445 445 HOH HOH . E 3 HOH A 26 447 447 HOH HOH . E 3 HOH A 27 448 448 HOH HOH . E 3 HOH A 28 449 449 HOH HOH . E 3 HOH A 29 450 450 HOH HOH . E 3 HOH A 30 451 451 HOH HOH . E 3 HOH A 31 452 452 HOH HOH . E 3 HOH A 32 455 455 HOH HOH . E 3 HOH A 33 456 456 HOH HOH . E 3 HOH A 34 457 457 HOH HOH . E 3 HOH A 35 458 458 HOH HOH . E 3 HOH A 36 459 459 HOH HOH . E 3 HOH A 37 461 461 HOH HOH . E 3 HOH A 38 462 462 HOH HOH . E 3 HOH A 39 463 463 HOH HOH . E 3 HOH A 40 465 465 HOH HOH . E 3 HOH A 41 467 467 HOH HOH . E 3 HOH A 42 469 469 HOH HOH . E 3 HOH A 43 471 471 HOH HOH . E 3 HOH A 44 472 472 HOH HOH . E 3 HOH A 45 473 473 HOH HOH . E 3 HOH A 46 479 479 HOH HOH . E 3 HOH A 47 482 482 HOH HOH . E 3 HOH A 48 486 486 HOH HOH . E 3 HOH A 49 487 487 HOH HOH . E 3 HOH A 50 493 493 HOH HOH . E 3 HOH A 51 494 494 HOH HOH . E 3 HOH A 52 495 495 HOH HOH . E 3 HOH A 53 496 496 HOH HOH . E 3 HOH A 54 500 500 HOH HOH . E 3 HOH A 55 501 501 HOH HOH . E 3 HOH A 56 503 503 HOH HOH . E 3 HOH A 57 504 504 HOH HOH . E 3 HOH A 58 505 505 HOH HOH . E 3 HOH A 59 508 508 HOH HOH . E 3 HOH A 60 509 509 HOH HOH . E 3 HOH A 61 513 513 HOH HOH . E 3 HOH A 62 514 514 HOH HOH . E 3 HOH A 63 516 516 HOH HOH . E 3 HOH A 64 519 519 HOH HOH . E 3 HOH A 65 522 522 HOH HOH . E 3 HOH A 66 523 523 HOH HOH . E 3 HOH A 67 527 527 HOH HOH . E 3 HOH A 68 528 528 HOH HOH . E 3 HOH A 69 534 534 HOH HOH . E 3 HOH A 70 535 535 HOH HOH . E 3 HOH A 71 536 536 HOH HOH . E 3 HOH A 72 537 537 HOH HOH . E 3 HOH A 73 541 541 HOH HOH . E 3 HOH A 74 545 545 HOH HOH . E 3 HOH A 75 546 546 HOH HOH . E 3 HOH A 76 551 551 HOH HOH . E 3 HOH A 77 552 552 HOH HOH . E 3 HOH A 78 554 554 HOH HOH . E 3 HOH A 79 555 555 HOH HOH . E 3 HOH A 80 558 558 HOH HOH . E 3 HOH A 81 559 559 HOH HOH . E 3 HOH A 82 562 562 HOH HOH . E 3 HOH A 83 563 563 HOH HOH . E 3 HOH A 84 564 564 HOH HOH . E 3 HOH A 85 569 569 HOH HOH . E 3 HOH A 86 574 574 HOH HOH . E 3 HOH A 87 576 576 HOH HOH . E 3 HOH A 88 579 579 HOH HOH . E 3 HOH A 89 580 580 HOH HOH . E 3 HOH A 90 584 584 HOH HOH . E 3 HOH A 91 586 586 HOH HOH . E 3 HOH A 92 589 589 HOH HOH . E 3 HOH A 93 590 590 HOH HOH . E 3 HOH A 94 594 594 HOH HOH . E 3 HOH A 95 597 597 HOH HOH . E 3 HOH A 96 604 604 HOH HOH . E 3 HOH A 97 605 605 HOH HOH . E 3 HOH A 98 607 607 HOH HOH . E 3 HOH A 99 608 608 HOH HOH . E 3 HOH A 100 612 612 HOH HOH . E 3 HOH A 101 615 615 HOH HOH . E 3 HOH A 102 616 616 HOH HOH . E 3 HOH A 103 617 617 HOH HOH . E 3 HOH A 104 618 618 HOH HOH . E 3 HOH A 105 619 619 HOH HOH . E 3 HOH A 106 620 620 HOH HOH . E 3 HOH A 107 621 621 HOH HOH . E 3 HOH A 108 625 625 HOH HOH . E 3 HOH A 109 627 627 HOH HOH . E 3 HOH A 110 630 630 HOH HOH . E 3 HOH A 111 632 632 HOH HOH . E 3 HOH A 112 635 635 HOH HOH . E 3 HOH A 113 636 636 HOH HOH . E 3 HOH A 114 638 638 HOH HOH . E 3 HOH A 115 639 639 HOH HOH . E 3 HOH A 116 643 643 HOH HOH . E 3 HOH A 117 644 644 HOH HOH . E 3 HOH A 118 645 645 HOH HOH . E 3 HOH A 119 646 646 HOH HOH . E 3 HOH A 120 647 647 HOH HOH . E 3 HOH A 121 648 648 HOH HOH . E 3 HOH A 122 652 652 HOH HOH . E 3 HOH A 123 653 653 HOH HOH . E 3 HOH A 124 654 654 HOH HOH . E 3 HOH A 125 657 657 HOH HOH . E 3 HOH A 126 658 658 HOH HOH . E 3 HOH A 127 659 659 HOH HOH . E 3 HOH A 128 660 660 HOH HOH . E 3 HOH A 129 663 663 HOH HOH . E 3 HOH A 130 664 664 HOH HOH . E 3 HOH A 131 665 665 HOH HOH . E 3 HOH A 132 666 666 HOH HOH . E 3 HOH A 133 667 667 HOH HOH . E 3 HOH A 134 672 672 HOH HOH . E 3 HOH A 135 674 674 HOH HOH . E 3 HOH A 136 676 676 HOH HOH . E 3 HOH A 137 677 677 HOH HOH . E 3 HOH A 138 678 678 HOH HOH . E 3 HOH A 139 679 679 HOH HOH . E 3 HOH A 140 680 680 HOH HOH . E 3 HOH A 141 684 684 HOH HOH . E 3 HOH A 142 688 688 HOH HOH . E 3 HOH A 143 690 690 HOH HOH . E 3 HOH A 144 691 691 HOH HOH . F 3 HOH B 1 402 402 HOH HOH . F 3 HOH B 2 404 404 HOH HOH . F 3 HOH B 3 413 413 HOH HOH . F 3 HOH B 4 414 414 HOH HOH . F 3 HOH B 5 416 416 HOH HOH . F 3 HOH B 6 417 417 HOH HOH . F 3 HOH B 7 423 423 HOH HOH . F 3 HOH B 8 425 425 HOH HOH . F 3 HOH B 9 428 428 HOH HOH . F 3 HOH B 10 431 431 HOH HOH . F 3 HOH B 11 433 433 HOH HOH . F 3 HOH B 12 435 435 HOH HOH . F 3 HOH B 13 436 436 HOH HOH . F 3 HOH B 14 438 438 HOH HOH . F 3 HOH B 15 440 440 HOH HOH . F 3 HOH B 16 453 453 HOH HOH . F 3 HOH B 17 460 460 HOH HOH . F 3 HOH B 18 464 464 HOH HOH . F 3 HOH B 19 466 466 HOH HOH . F 3 HOH B 20 470 470 HOH HOH . F 3 HOH B 21 475 475 HOH HOH . F 3 HOH B 22 476 476 HOH HOH . F 3 HOH B 23 477 477 HOH HOH . F 3 HOH B 24 478 478 HOH HOH . F 3 HOH B 25 481 481 HOH HOH . F 3 HOH B 26 483 483 HOH HOH . F 3 HOH B 27 484 484 HOH HOH . F 3 HOH B 28 485 485 HOH HOH . F 3 HOH B 29 489 489 HOH HOH . F 3 HOH B 30 490 490 HOH HOH . F 3 HOH B 31 491 491 HOH HOH . F 3 HOH B 32 492 492 HOH HOH . F 3 HOH B 33 497 497 HOH HOH . F 3 HOH B 34 502 502 HOH HOH . F 3 HOH B 35 506 506 HOH HOH . F 3 HOH B 36 507 507 HOH HOH . F 3 HOH B 37 510 510 HOH HOH . F 3 HOH B 38 511 511 HOH HOH . F 3 HOH B 39 512 512 HOH HOH . F 3 HOH B 40 515 515 HOH HOH . F 3 HOH B 41 517 517 HOH HOH . F 3 HOH B 42 518 518 HOH HOH . F 3 HOH B 43 520 520 HOH HOH . F 3 HOH B 44 524 524 HOH HOH . F 3 HOH B 45 525 525 HOH HOH . F 3 HOH B 46 526 526 HOH HOH . F 3 HOH B 47 529 529 HOH HOH . F 3 HOH B 48 530 530 HOH HOH . F 3 HOH B 49 539 539 HOH HOH . F 3 HOH B 50 540 540 HOH HOH . F 3 HOH B 51 543 543 HOH HOH . F 3 HOH B 52 548 548 HOH HOH . F 3 HOH B 53 549 549 HOH HOH . F 3 HOH B 54 550 550 HOH HOH . F 3 HOH B 55 553 553 HOH HOH . F 3 HOH B 56 557 557 HOH HOH . F 3 HOH B 57 560 560 HOH HOH . F 3 HOH B 58 561 561 HOH HOH . F 3 HOH B 59 565 565 HOH HOH . F 3 HOH B 60 566 566 HOH HOH . F 3 HOH B 61 567 567 HOH HOH . F 3 HOH B 62 568 568 HOH HOH . F 3 HOH B 63 570 570 HOH HOH . F 3 HOH B 64 572 572 HOH HOH . F 3 HOH B 65 575 575 HOH HOH . F 3 HOH B 66 577 577 HOH HOH . F 3 HOH B 67 578 578 HOH HOH . F 3 HOH B 68 581 581 HOH HOH . F 3 HOH B 69 582 582 HOH HOH . F 3 HOH B 70 583 583 HOH HOH . F 3 HOH B 71 587 587 HOH HOH . F 3 HOH B 72 588 588 HOH HOH . F 3 HOH B 73 592 592 HOH HOH . F 3 HOH B 74 593 593 HOH HOH . F 3 HOH B 75 596 596 HOH HOH . F 3 HOH B 76 598 598 HOH HOH . F 3 HOH B 77 599 599 HOH HOH . F 3 HOH B 78 600 600 HOH HOH . F 3 HOH B 79 601 601 HOH HOH . F 3 HOH B 80 602 602 HOH HOH . F 3 HOH B 81 606 606 HOH HOH . F 3 HOH B 82 609 609 HOH HOH . F 3 HOH B 83 610 610 HOH HOH . F 3 HOH B 84 611 611 HOH HOH . F 3 HOH B 85 614 614 HOH HOH . F 3 HOH B 86 622 622 HOH HOH . F 3 HOH B 87 623 623 HOH HOH . F 3 HOH B 88 624 624 HOH HOH . F 3 HOH B 89 626 626 HOH HOH . F 3 HOH B 90 628 628 HOH HOH . F 3 HOH B 91 629 629 HOH HOH . F 3 HOH B 92 633 633 HOH HOH . F 3 HOH B 93 634 634 HOH HOH . F 3 HOH B 94 637 637 HOH HOH . F 3 HOH B 95 640 640 HOH HOH . F 3 HOH B 96 641 641 HOH HOH . F 3 HOH B 97 642 642 HOH HOH . F 3 HOH B 98 649 649 HOH HOH . F 3 HOH B 99 650 650 HOH HOH . F 3 HOH B 100 651 651 HOH HOH . F 3 HOH B 101 655 655 HOH HOH . F 3 HOH B 102 656 656 HOH HOH . F 3 HOH B 103 661 661 HOH HOH . F 3 HOH B 104 662 662 HOH HOH . F 3 HOH B 105 668 668 HOH HOH . F 3 HOH B 106 669 669 HOH HOH . F 3 HOH B 107 670 670 HOH HOH . F 3 HOH B 108 671 671 HOH HOH . F 3 HOH B 109 673 673 HOH HOH . F 3 HOH B 110 675 675 HOH HOH . F 3 HOH B 111 681 681 HOH HOH . F 3 HOH B 112 682 682 HOH HOH . F 3 HOH B 113 683 683 HOH HOH . F 3 HOH B 114 685 685 HOH HOH . F 3 HOH B 115 686 686 HOH HOH . F 3 HOH B 116 687 687 HOH HOH . F 3 HOH B 117 689 689 HOH HOH . F 3 HOH B 118 692 692 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 2 36.97 64.646 -152.838 1 23.75 ? C1 CIT 1002 B 1 HETATM 2 O O1 CIT . . . D 2 36.35 63.811 -152.221 1 19.5 ? O1 CIT 1002 B 1 HETATM 3 O O2 CIT . . . D 2 36.88 64.865 -154.032 1 23.41 ? O2 CIT 1002 B 1 HETATM 4 C C2 CIT . . . D 2 37.934 65.513 -152.023 1 28.06 ? C2 CIT 1002 B 1 HETATM 5 C C3 CIT . . . D 2 37.359 66.558 -150.982 1 33.72 ? C3 CIT 1002 B 1 HETATM 6 O O7 CIT . . . D 2 35.933 66.576 -151.038 1 32.44 ? O7 CIT 1002 B 1 HETATM 7 C C4 CIT . . . D 2 37.732 68.048 -151.535 1 36.98 ? C4 CIT 1002 B 1 HETATM 8 C C5 CIT . . . D 2 37.305 68.538 -152.965 1 39.8 ? C5 CIT 1002 B 1 HETATM 9 O O3 CIT . . . D 2 36.126 68.811 -153.105 1 40.78 ? O3 CIT 1002 B 1 HETATM 10 O O4 CIT . . . D 2 38.094 68.645 -153.882 1 42.34 ? O4 CIT 1002 B 1 HETATM 11 C C6 CIT . . . D 2 37.826 66.136 -149.522 1 35.64 ? C6 CIT 1002 B 1 HETATM 12 O O5 CIT . . . D 2 38.598 66.845 -148.916 1 35.81 ? O5 CIT 1002 B 1 HETATM 13 O O6 CIT . . . D 2 37.411 65.076 -149.054 1 36.21 ? O6 CIT 1002 B 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #