data_1U18 # _model_server_result.job_id 9V8qBCrzMXydwkpq4xkRzw _model_server_result.datetime_utc '2024-12-22 21:07:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1u18 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 1U18 # _exptl.entry_id 1U18 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 111.145 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HISTAMINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.57 _cell.angle_gamma 90 _cell.entry_id 1U18 _cell.length_a 38.82 _cell.length_b 73.85 _cell.length_c 65.38 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U18 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 123 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? disulf ? disulf2 A SG CYS 42 A CYS 42 1_555 A SG CYS 172 A CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? disulf ? disulf3 B SG CYS 3 B CYS 3 1_555 B SG CYS 123 B CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf4 B SG CYS 42 B CYS 42 1_555 B SG CYS 172 B CYS 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 D FE HEM . A HEM 201 1_555 E NE2 HSM . A HSM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc2 D FE HEM . A HEM 201 1_555 I O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc3 G FE HEM . B HEM 201 1_555 H NE2 HSM . B HSM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc4 G FE HEM . B HEM 201 1_555 J O HOH . B HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? # _chem_comp.formula 'C5 H9 N3' _chem_comp.formula_weight 111.145 _chem_comp.id HSM _chem_comp.mon_nstd_flag . _chem_comp.name HISTAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA HSM sing 234 n n N H1 HSM sing 235 n n N H2 HSM sing 236 n n CA CB HSM sing 237 n n CA HA1 HSM sing 238 n n CA HA2 HSM sing 239 n n CB CG HSM sing 240 n n CB HB1 HSM sing 241 n n CB HB2 HSM sing 242 n n CG ND1 HSM sing 243 n y CG CD2 HSM doub 244 n y ND1 CE1 HSM doub 245 n y CD2 NE2 HSM sing 246 n y CD2 HD2 HSM sing 247 n n CE1 NE2 HSM sing 248 n y CE1 HE1 HSM sing 249 n n NE2 HE2 HSM sing 250 n n # _atom_sites.entry_id 1U18 _atom_sites.fract_transf_matrix[1][1] 0.02576 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003882 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013541 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015468 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 301 1 PO4 PO4 . D 3 HEM A 1 201 1 HEM HEM . E 4 HSM A 1 401 1 HSM HSM . F 2 PO4 B 1 302 2 PO4 PO4 . G 3 HEM B 1 201 1 HEM HEM . H 4 HSM B 1 402 1 HSM HSM . I 5 HOH A 1 402 2 HOH HOH . I 5 HOH A 2 403 3 HOH HOH . I 5 HOH A 3 404 6 HOH HOH . I 5 HOH A 4 405 7 HOH HOH . I 5 HOH A 5 406 9 HOH HOH . I 5 HOH A 6 407 10 HOH HOH . I 5 HOH A 7 408 12 HOH HOH . I 5 HOH A 8 409 13 HOH HOH . I 5 HOH A 9 410 15 HOH HOH . I 5 HOH A 10 411 16 HOH HOH . I 5 HOH A 11 412 18 HOH HOH . I 5 HOH A 12 413 20 HOH HOH . I 5 HOH A 13 414 21 HOH HOH . I 5 HOH A 14 415 22 HOH HOH . I 5 HOH A 15 416 23 HOH HOH . I 5 HOH A 16 417 24 HOH HOH . I 5 HOH A 17 418 25 HOH HOH . I 5 HOH A 18 419 26 HOH HOH . I 5 HOH A 19 420 27 HOH HOH . I 5 HOH A 20 421 29 HOH HOH . I 5 HOH A 21 422 31 HOH HOH . I 5 HOH A 22 423 34 HOH HOH . I 5 HOH A 23 424 35 HOH HOH . I 5 HOH A 24 425 36 HOH HOH . I 5 HOH A 25 426 38 HOH HOH . I 5 HOH A 26 427 39 HOH HOH . I 5 HOH A 27 428 40 HOH HOH . I 5 HOH A 28 429 41 HOH HOH . I 5 HOH A 29 430 44 HOH HOH . I 5 HOH A 30 431 45 HOH HOH . I 5 HOH A 31 432 46 HOH HOH . I 5 HOH A 32 433 48 HOH HOH . I 5 HOH A 33 434 51 HOH HOH . I 5 HOH A 34 435 52 HOH HOH . I 5 HOH A 35 436 54 HOH HOH . I 5 HOH A 36 437 56 HOH HOH . I 5 HOH A 37 438 58 HOH HOH . I 5 HOH A 38 439 60 HOH HOH . I 5 HOH A 39 440 61 HOH HOH . I 5 HOH A 40 441 62 HOH HOH . I 5 HOH A 41 442 65 HOH HOH . I 5 HOH A 42 443 66 HOH HOH . I 5 HOH A 43 444 70 HOH HOH . I 5 HOH A 44 445 72 HOH HOH . I 5 HOH A 45 446 73 HOH HOH . I 5 HOH A 46 447 74 HOH HOH . I 5 HOH A 47 448 76 HOH HOH . I 5 HOH A 48 449 77 HOH HOH . I 5 HOH A 49 450 78 HOH HOH . I 5 HOH A 50 451 79 HOH HOH . I 5 HOH A 51 452 80 HOH HOH . I 5 HOH A 52 453 81 HOH HOH . I 5 HOH A 53 454 82 HOH HOH . I 5 HOH A 54 455 83 HOH HOH . I 5 HOH A 55 456 84 HOH HOH . I 5 HOH A 56 457 85 HOH HOH . I 5 HOH A 57 458 86 HOH HOH . I 5 HOH A 58 459 88 HOH HOH . I 5 HOH A 59 460 89 HOH HOH . I 5 HOH A 60 461 91 HOH HOH . I 5 HOH A 61 462 95 HOH HOH . I 5 HOH A 62 463 96 HOH HOH . I 5 HOH A 63 464 99 HOH HOH . I 5 HOH A 64 465 103 HOH HOH . I 5 HOH A 65 466 104 HOH HOH . I 5 HOH A 66 467 106 HOH HOH . I 5 HOH A 67 468 107 HOH HOH . I 5 HOH A 68 469 108 HOH HOH . I 5 HOH A 69 470 110 HOH HOH . I 5 HOH A 70 471 112 HOH HOH . I 5 HOH A 71 472 114 HOH HOH . I 5 HOH A 72 473 115 HOH HOH . I 5 HOH A 73 474 117 HOH HOH . I 5 HOH A 74 475 118 HOH HOH . I 5 HOH A 75 476 120 HOH HOH . I 5 HOH A 76 477 122 HOH HOH . I 5 HOH A 77 478 125 HOH HOH . I 5 HOH A 78 479 129 HOH HOH . I 5 HOH A 79 480 130 HOH HOH . I 5 HOH A 80 481 131 HOH HOH . I 5 HOH A 81 482 133 HOH HOH . I 5 HOH A 82 483 134 HOH HOH . I 5 HOH A 83 484 136 HOH HOH . I 5 HOH A 84 485 137 HOH HOH . I 5 HOH A 85 486 138 HOH HOH . I 5 HOH A 86 487 139 HOH HOH . I 5 HOH A 87 488 140 HOH HOH . I 5 HOH A 88 489 143 HOH HOH . I 5 HOH A 89 490 144 HOH HOH . I 5 HOH A 90 491 145 HOH HOH . I 5 HOH A 91 492 146 HOH HOH . I 5 HOH A 92 493 147 HOH HOH . I 5 HOH A 93 494 148 HOH HOH . I 5 HOH A 94 495 149 HOH HOH . I 5 HOH A 95 496 150 HOH HOH . I 5 HOH A 96 497 153 HOH HOH . I 5 HOH A 97 498 155 HOH HOH . I 5 HOH A 98 499 156 HOH HOH . I 5 HOH A 99 500 158 HOH HOH . I 5 HOH A 100 501 159 HOH HOH . I 5 HOH A 101 502 162 HOH HOH . I 5 HOH A 102 503 163 HOH HOH . I 5 HOH A 103 504 164 HOH HOH . I 5 HOH A 104 505 165 HOH HOH . I 5 HOH A 105 506 166 HOH HOH . I 5 HOH A 106 507 170 HOH HOH . I 5 HOH A 107 508 171 HOH HOH . I 5 HOH A 108 509 172 HOH HOH . I 5 HOH A 109 510 174 HOH HOH . I 5 HOH A 110 511 176 HOH HOH . I 5 HOH A 111 512 178 HOH HOH . I 5 HOH A 112 513 179 HOH HOH . I 5 HOH A 113 514 181 HOH HOH . I 5 HOH A 114 515 182 HOH HOH . I 5 HOH A 115 516 184 HOH HOH . I 5 HOH A 116 517 186 HOH HOH . I 5 HOH A 117 518 187 HOH HOH . I 5 HOH A 118 519 192 HOH HOH . I 5 HOH A 119 520 194 HOH HOH . I 5 HOH A 120 521 195 HOH HOH . I 5 HOH A 121 522 197 HOH HOH . I 5 HOH A 122 523 198 HOH HOH . I 5 HOH A 123 524 199 HOH HOH . I 5 HOH A 124 525 200 HOH HOH . I 5 HOH A 125 526 201 HOH HOH . I 5 HOH A 126 527 203 HOH HOH . I 5 HOH A 127 528 205 HOH HOH . I 5 HOH A 128 529 206 HOH HOH . I 5 HOH A 129 530 207 HOH HOH . I 5 HOH A 130 531 208 HOH HOH . I 5 HOH A 131 532 209 HOH HOH . I 5 HOH A 132 533 210 HOH HOH . J 5 HOH B 1 403 1 HOH HOH . J 5 HOH B 2 404 4 HOH HOH . J 5 HOH B 3 405 5 HOH HOH . J 5 HOH B 4 406 8 HOH HOH . J 5 HOH B 5 407 11 HOH HOH . J 5 HOH B 6 408 14 HOH HOH . J 5 HOH B 7 409 17 HOH HOH . J 5 HOH B 8 410 19 HOH HOH . J 5 HOH B 9 411 28 HOH HOH . J 5 HOH B 10 412 30 HOH HOH . J 5 HOH B 11 413 32 HOH HOH . J 5 HOH B 12 414 33 HOH HOH . J 5 HOH B 13 415 37 HOH HOH . J 5 HOH B 14 416 42 HOH HOH . J 5 HOH B 15 417 43 HOH HOH . J 5 HOH B 16 418 47 HOH HOH . J 5 HOH B 17 419 49 HOH HOH . J 5 HOH B 18 420 50 HOH HOH . J 5 HOH B 19 421 53 HOH HOH . J 5 HOH B 20 422 55 HOH HOH . J 5 HOH B 21 423 57 HOH HOH . J 5 HOH B 22 424 59 HOH HOH . J 5 HOH B 23 425 63 HOH HOH . J 5 HOH B 24 426 64 HOH HOH . J 5 HOH B 25 427 67 HOH HOH . J 5 HOH B 26 428 68 HOH HOH . J 5 HOH B 27 429 69 HOH HOH . J 5 HOH B 28 430 71 HOH HOH . J 5 HOH B 29 431 75 HOH HOH . J 5 HOH B 30 432 87 HOH HOH . J 5 HOH B 31 433 90 HOH HOH . J 5 HOH B 32 434 92 HOH HOH . J 5 HOH B 33 435 93 HOH HOH . J 5 HOH B 34 436 94 HOH HOH . J 5 HOH B 35 437 97 HOH HOH . J 5 HOH B 36 438 98 HOH HOH . J 5 HOH B 37 439 100 HOH HOH . J 5 HOH B 38 440 101 HOH HOH . J 5 HOH B 39 441 102 HOH HOH . J 5 HOH B 40 442 105 HOH HOH . J 5 HOH B 41 443 109 HOH HOH . J 5 HOH B 42 444 111 HOH HOH . J 5 HOH B 43 445 113 HOH HOH . J 5 HOH B 44 446 116 HOH HOH . J 5 HOH B 45 447 119 HOH HOH . J 5 HOH B 46 448 121 HOH HOH . J 5 HOH B 47 449 123 HOH HOH . J 5 HOH B 48 450 124 HOH HOH . J 5 HOH B 49 451 126 HOH HOH . J 5 HOH B 50 452 127 HOH HOH . J 5 HOH B 51 453 128 HOH HOH . J 5 HOH B 52 454 132 HOH HOH . J 5 HOH B 53 455 135 HOH HOH . J 5 HOH B 54 456 141 HOH HOH . J 5 HOH B 55 457 142 HOH HOH . J 5 HOH B 56 458 151 HOH HOH . J 5 HOH B 57 459 152 HOH HOH . J 5 HOH B 58 460 154 HOH HOH . J 5 HOH B 59 461 157 HOH HOH . J 5 HOH B 60 462 160 HOH HOH . J 5 HOH B 61 463 161 HOH HOH . J 5 HOH B 62 464 167 HOH HOH . J 5 HOH B 63 465 168 HOH HOH . J 5 HOH B 64 466 169 HOH HOH . J 5 HOH B 65 467 173 HOH HOH . J 5 HOH B 66 468 175 HOH HOH . J 5 HOH B 67 469 177 HOH HOH . J 5 HOH B 68 470 180 HOH HOH . J 5 HOH B 69 471 183 HOH HOH . J 5 HOH B 70 472 185 HOH HOH . J 5 HOH B 71 473 188 HOH HOH . J 5 HOH B 72 474 189 HOH HOH . J 5 HOH B 73 475 190 HOH HOH . J 5 HOH B 74 476 191 HOH HOH . J 5 HOH B 75 477 193 HOH HOH . J 5 HOH B 76 478 196 HOH HOH . J 5 HOH B 77 479 202 HOH HOH . J 5 HOH B 78 480 204 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N HSM . . . E 4 21.372 31.603 61.545 1 30.69 ? N HSM 401 A 1 HETATM 2 C CA HSM . . . E 4 22.543 30.833 61.965 1 36.14 ? CA HSM 401 A 1 HETATM 3 C CB HSM . . . E 4 23.586 30.592 60.873 1 35.44 ? CB HSM 401 A 1 HETATM 4 C CG HSM . . . E 4 24.551 29.483 61.221 1 32.7 ? CG HSM 401 A 1 HETATM 5 N ND1 HSM . . . E 4 25.85 29.657 61.567 1 29.83 ? ND1 HSM 401 A 1 HETATM 6 C CD2 HSM . . . E 4 24.348 28.106 61.22 1 31.95 ? CD2 HSM 401 A 1 HETATM 7 C CE1 HSM . . . E 4 26.444 28.466 61.76 1 31.57 ? CE1 HSM 401 A 1 HETATM 8 N NE2 HSM . . . E 4 25.513 27.529 61.531 1 29.61 ? NE2 HSM 401 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 8 #