data_1U3C # _model_server_result.job_id JVBtFDbFThRGfxoqypwn4w _model_server_result.datetime_utc '2024-11-24 14:38:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1u3c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":518}' # _entry.id 1U3C # _exptl.entry_id 1U3C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXANE-1,6-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1U3C _cell.length_a 169.43 _cell.length_b 169.43 _cell.length_c 104.245 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 80 A CYS 80 1_555 A SG CYS 190 A CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 A O ASN 238 A ASN 238 1_555 C MG MG . A MG 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc2 A O LYS 241 A LYS 241 1_555 D MG MG . A MG 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.037 ? metalc ? metalc3 A O SER 244 A SER 244 1_555 D MG MG . A MG 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc4 A N SER 244 A SER 244 1_555 D MG MG . A MG 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? metalc ? metalc5 A OG1 THR 246 A THR 246 1_555 C MG MG . A MG 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc6 A OG1 THR 246 A THR 246 1_555 D MG MG . A MG 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc7 A NE2 HIS 358 A HIS 358 1_555 C MG MG . A MG 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.014 ? metalc ? metalc8 A OD1 ASP 359 A ASP 359 1_555 B MG MG . A MG 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.08 ? metalc ? metalc9 A OD2 ASP 359 A ASP 359 1_555 B MG MG . A MG 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc10 B MG MG . A MG 514 1_555 H O6 HEZ . A HEZ 518 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.985 ? metalc ? metalc11 B MG MG . A MG 514 1_555 I O HOH . A HOH 579 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.073 ? metalc ? metalc12 B MG MG . A MG 514 1_555 I O HOH . A HOH 580 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id HEZ _chem_comp.mon_nstd_flag . _chem_comp.name HEXANE-1,6-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 HEZ sing 220 n n O1 HO1 HEZ sing 221 n n C1 C2 HEZ sing 222 n n C1 H11 HEZ sing 223 n n C1 H12 HEZ sing 224 n n C2 C3 HEZ sing 225 n n C2 H21 HEZ sing 226 n n C2 H22 HEZ sing 227 n n C3 C4 HEZ sing 228 n n C3 H31 HEZ sing 229 n n C3 H32 HEZ sing 230 n n C4 C5 HEZ sing 231 n n C4 H41 HEZ sing 232 n n C4 H42 HEZ sing 233 n n C5 C6 HEZ sing 234 n n C5 H51 HEZ sing 235 n n C5 H52 HEZ sing 236 n n C6 O6 HEZ sing 237 n n C6 H61 HEZ sing 238 n n C6 H62 HEZ sing 239 n n O6 HO6 HEZ sing 240 n n # _atom_sites.entry_id 1U3C _atom_sites.fract_transf_matrix[1][1] 0.005902 _atom_sites.fract_transf_matrix[1][2] 0.003408 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006815 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 514 514 MG MG2 . C 2 MG A 1 515 515 MG MG2 . D 2 MG A 1 516 516 MG MG2 . E 3 CL A 1 517 517 CL CL1 . F 4 FAD A 1 510 510 FAD FAD . G 5 NDS A 1 512 512 NDS SB . H 6 HEZ A 1 518 518 HEZ HEZ . I 7 HOH A 1 519 1 HOH WAT . I 7 HOH A 2 520 2 HOH WAT . I 7 HOH A 3 521 3 HOH WAT . I 7 HOH A 4 522 4 HOH WAT . I 7 HOH A 5 523 5 HOH WAT . I 7 HOH A 6 524 7 HOH WAT . I 7 HOH A 7 525 8 HOH WAT . I 7 HOH A 8 526 9 HOH WAT . I 7 HOH A 9 527 10 HOH WAT . I 7 HOH A 10 528 11 HOH WAT . I 7 HOH A 11 529 12 HOH WAT . I 7 HOH A 12 530 13 HOH WAT . I 7 HOH A 13 531 14 HOH WAT . I 7 HOH A 14 532 15 HOH WAT . I 7 HOH A 15 533 16 HOH WAT . I 7 HOH A 16 534 17 HOH WAT . I 7 HOH A 17 535 18 HOH WAT . I 7 HOH A 18 536 19 HOH WAT . I 7 HOH A 19 537 20 HOH WAT . I 7 HOH A 20 538 21 HOH WAT . I 7 HOH A 21 539 22 HOH WAT . I 7 HOH A 22 540 23 HOH WAT . I 7 HOH A 23 541 24 HOH WAT . I 7 HOH A 24 542 25 HOH WAT . I 7 HOH A 25 543 26 HOH WAT . I 7 HOH A 26 544 27 HOH WAT . I 7 HOH A 27 545 28 HOH WAT . I 7 HOH A 28 546 29 HOH WAT . I 7 HOH A 29 547 30 HOH WAT . I 7 HOH A 30 548 31 HOH WAT . I 7 HOH A 31 549 32 HOH WAT . I 7 HOH A 32 550 33 HOH WAT . I 7 HOH A 33 551 34 HOH WAT . I 7 HOH A 34 552 35 HOH WAT . I 7 HOH A 35 553 36 HOH WAT . I 7 HOH A 36 554 37 HOH WAT . I 7 HOH A 37 555 38 HOH WAT . I 7 HOH A 38 556 39 HOH WAT . I 7 HOH A 39 557 40 HOH WAT . I 7 HOH A 40 558 41 HOH WAT . I 7 HOH A 41 559 42 HOH WAT . I 7 HOH A 42 560 43 HOH WAT . I 7 HOH A 43 561 44 HOH WAT . I 7 HOH A 44 562 45 HOH WAT . I 7 HOH A 45 563 46 HOH WAT . I 7 HOH A 46 564 47 HOH WAT . I 7 HOH A 47 565 48 HOH WAT . I 7 HOH A 48 566 49 HOH WAT . I 7 HOH A 49 567 50 HOH WAT . I 7 HOH A 50 568 51 HOH WAT . I 7 HOH A 51 569 52 HOH WAT . I 7 HOH A 52 570 53 HOH WAT . I 7 HOH A 53 571 54 HOH WAT . I 7 HOH A 54 572 55 HOH WAT . I 7 HOH A 55 573 56 HOH WAT . I 7 HOH A 56 574 57 HOH WAT . I 7 HOH A 57 575 58 HOH WAT . I 7 HOH A 58 576 59 HOH WAT . I 7 HOH A 59 577 60 HOH WAT . I 7 HOH A 60 578 61 HOH WAT . I 7 HOH A 61 579 62 HOH WAT . I 7 HOH A 62 580 63 HOH WAT . I 7 HOH A 63 581 64 HOH WAT . I 7 HOH A 64 582 65 HOH WAT . I 7 HOH A 65 583 66 HOH WAT . I 7 HOH A 66 584 67 HOH WAT . I 7 HOH A 67 585 69 HOH WAT . I 7 HOH A 68 586 70 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 HEZ . A . H 6 60.765 2.885 61.768 0.5 60.71 ? O1 HEZ 518 A 1 HETATM 2 O O1 HEZ . B . H 6 60.763 2.883 61.769 0.5 62.86 ? O1 HEZ 518 A 1 HETATM 3 C C1 HEZ . A . H 6 60.203 3.228 63.037 0.5 53.81 ? C1 HEZ 518 A 1 HETATM 4 C C1 HEZ . B . H 6 60.208 3.222 63.04 0.5 56.6 ? C1 HEZ 518 A 1 HETATM 5 C C2 HEZ . A . H 6 59.776 1.944 63.751 0.5 53.49 ? C2 HEZ 518 A 1 HETATM 6 C C2 HEZ . B . H 6 59.783 1.935 63.755 0.5 56.77 ? C2 HEZ 518 A 1 HETATM 7 C C3 HEZ . A . H 6 59.304 2.232 65.177 0.5 53.54 ? C3 HEZ 518 A 1 HETATM 8 C C3 HEZ . B . H 6 59.317 2.225 65.183 0.5 57.32 ? C3 HEZ 518 A 1 HETATM 9 C C4 HEZ . A . H 6 58.912 0.924 65.864 0.5 48.55 ? C4 HEZ 518 A 1 HETATM 10 C C4 HEZ . B . H 6 58.892 0.932 65.88 0.5 53.78 ? C4 HEZ 518 A 1 HETATM 11 C C5 HEZ . A . H 6 59.434 0.887 67.305 0.5 40.42 ? C5 HEZ 518 A 1 HETATM 12 C C5 HEZ . B . H 6 59.513 0.855 67.279 0.5 46.73 ? C5 HEZ 518 A 1 HETATM 13 C C6 HEZ . A . H 6 59.112 -0.456 67.959 0.5 28.36 ? C6 HEZ 518 A 1 HETATM 14 C C6 HEZ . B . H 6 58.446 0.648 68.354 0.5 39.68 ? C6 HEZ 518 A 1 HETATM 15 O O6 HEZ . A . H 6 59.654 -1.515 67.164 0.5 37 ? O6 HEZ 518 A 1 HETATM 16 O O6 HEZ . B . H 6 59.071 0.565 69.637 0.5 38.79 ? O6 HEZ 518 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #