data_1U3G
#
_model_server_result.job_id            vWTt5LhEuV6mPCboo1Ljjw 
_model_server_result.datetime_utc      '2024-11-20 15:35:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1u3g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    1U3G 
#
_exptl.entry_id    1U3G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              473.439 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-HYDROXYMETHYLENE-6-HYDROFOLIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1U3G 
_cell.length_a            50.925 
_cell.length_b            84.106 
_cell.length_c            41.615 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1U3G 
_symmetry.cell_setting             orthorhombic 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 149 A ASP 124 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? 
metalc ? metalc2 A OD1 ASP 179 A ASP 154 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
metalc ? metalc3 D O3B ADP . A ADP 301 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? 
metalc ? metalc4 D O1A ADP . A ADP 301 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? 
metalc ? metalc5 C MG MG . A MG 401 1_555 F O HOH . A HOH 662 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
#
_chem_comp.formula           'C20 H23 N7 O7' 
_chem_comp.formula_weight    473.439 
_chem_comp.id                THF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-HYDROXYMETHYLENE-6-HYDROFOLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 THF sing 338 n y 
N1 C8A THF sing 339 n y 
N1 HN1 THF sing 340 n n 
C2 NA2 THF sing 341 n n 
C2 N3 THF doub 342 n y 
NA2 HN21 THF sing 343 n n 
NA2 HN22 THF sing 344 n n 
N3 C4 THF sing 345 n y 
C4 O4 THF doub 346 n n 
C4 C4A THF sing 347 n y 
C4A N5 THF sing 348 n n 
C4A C8A THF doub 349 n y 
N5 C6 THF sing 350 n n 
N5 CP1 THF sing 351 n n 
C6 C7 THF sing 352 n n 
C6 C9 THF sing 353 n n 
C6 H6 THF sing 354 n n 
C7 N8 THF doub 355 n n 
C7 H7 THF sing 356 n n 
N8 C8A THF sing 357 n n 
C9 N10 THF sing 358 n n 
C9 H91 THF sing 359 n n 
C9 H92 THF sing 360 n n 
N10 C14 THF sing 361 n n 
N10 HN0 THF sing 362 n n 
C11 C12 THF doub 363 n y 
C11 C16 THF sing 364 n y 
C11 C THF sing 365 n n 
C12 C13 THF sing 366 n y 
C12 H12 THF sing 367 n n 
C13 C14 THF doub 368 n y 
C13 H13 THF sing 369 n n 
C14 C15 THF sing 370 n y 
C15 C16 THF doub 371 n y 
C15 H15 THF sing 372 n n 
C16 H16 THF sing 373 n n 
C O THF doub 374 n n 
C N THF sing 375 n n 
N CA THF sing 376 n n 
N HN THF sing 377 n n 
CA CB THF sing 378 n n 
CA CT THF sing 379 n n 
CA HA THF sing 380 n n 
CB CG THF sing 381 n n 
CB HB1 THF sing 382 n n 
CB HB2 THF sing 383 n n 
CG CD THF sing 384 n n 
CG HG1 THF sing 385 n n 
CG HG2 THF sing 386 n n 
CD OE1 THF doub 387 n n 
CD OE2 THF sing 388 n n 
OE2 HOE2 THF sing 389 n n 
CT O1 THF doub 390 n n 
CT O2 THF sing 391 n n 
O2 HO2 THF sing 392 n n 
CP1 O3 THF sing 393 n n 
CP1 HCP1 THF sing 394 n n 
CP1 HCP2 THF sing 395 n n 
O3 HO3 THF sing 396 n n 
#
_atom_sites.entry_id                     1U3G 
_atom_sites.fract_transf_matrix[1][1]    0.019637 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01189 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02403 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PO4 A 1 201 201 PO4 PO4 . 
C 3 MG A 1 401 401 MG MG . 
D 4 ADP A 1 301 301 ADP ADP . 
E 5 THF A 1 501 501 THF THF . 
F 6 HOH A 1 601 601 HOH HOH . 
F 6 HOH A 2 602 602 HOH HOH . 
F 6 HOH A 3 603 603 HOH HOH . 
F 6 HOH A 4 604 604 HOH HOH . 
F 6 HOH A 5 605 605 HOH HOH . 
F 6 HOH A 6 606 606 HOH HOH . 
F 6 HOH A 7 607 607 HOH HOH . 
F 6 HOH A 8 608 608 HOH HOH . 
F 6 HOH A 9 609 609 HOH HOH . 
F 6 HOH A 10 610 610 HOH HOH . 
F 6 HOH A 11 611 611 HOH HOH . 
F 6 HOH A 12 612 612 HOH HOH . 
F 6 HOH A 13 613 613 HOH HOH . 
F 6 HOH A 14 614 614 HOH HOH . 
F 6 HOH A 15 615 615 HOH HOH . 
F 6 HOH A 16 616 616 HOH HOH . 
F 6 HOH A 17 617 617 HOH HOH . 
F 6 HOH A 18 618 618 HOH HOH . 
F 6 HOH A 19 619 619 HOH HOH . 
F 6 HOH A 20 620 620 HOH HOH . 
F 6 HOH A 21 621 621 HOH HOH . 
F 6 HOH A 22 622 622 HOH HOH . 
F 6 HOH A 23 623 623 HOH HOH . 
F 6 HOH A 24 624 624 HOH HOH . 
F 6 HOH A 25 625 625 HOH HOH . 
F 6 HOH A 26 626 626 HOH HOH . 
F 6 HOH A 27 627 627 HOH HOH . 
F 6 HOH A 28 628 628 HOH HOH . 
F 6 HOH A 29 629 629 HOH HOH . 
F 6 HOH A 30 630 630 HOH HOH . 
F 6 HOH A 31 631 631 HOH HOH . 
F 6 HOH A 32 632 632 HOH HOH . 
F 6 HOH A 33 633 633 HOH HOH . 
F 6 HOH A 34 634 634 HOH HOH . 
F 6 HOH A 35 635 635 HOH HOH . 
F 6 HOH A 36 636 636 HOH HOH . 
F 6 HOH A 37 637 637 HOH HOH . 
F 6 HOH A 38 638 638 HOH HOH . 
F 6 HOH A 39 639 639 HOH HOH . 
F 6 HOH A 40 640 640 HOH HOH . 
F 6 HOH A 41 641 641 HOH HOH . 
F 6 HOH A 42 642 642 HOH HOH . 
F 6 HOH A 43 643 643 HOH HOH . 
F 6 HOH A 44 644 644 HOH HOH . 
F 6 HOH A 45 645 645 HOH HOH . 
F 6 HOH A 46 646 646 HOH HOH . 
F 6 HOH A 47 647 647 HOH HOH . 
F 6 HOH A 48 648 648 HOH HOH . 
F 6 HOH A 49 649 649 HOH HOH . 
F 6 HOH A 50 650 650 HOH HOH . 
F 6 HOH A 51 651 651 HOH HOH . 
F 6 HOH A 52 652 652 HOH HOH . 
F 6 HOH A 53 653 653 HOH HOH . 
F 6 HOH A 54 654 654 HOH HOH . 
F 6 HOH A 55 655 655 HOH HOH . 
F 6 HOH A 56 656 656 HOH HOH . 
F 6 HOH A 57 657 657 HOH HOH . 
F 6 HOH A 58 658 658 HOH HOH . 
F 6 HOH A 59 659 659 HOH HOH . 
F 6 HOH A 60 660 660 HOH HOH . 
F 6 HOH A 61 661 661 HOH HOH . 
F 6 HOH A 62 662 662 HOH HOH . 
F 6 HOH A 63 663 663 HOH HOH . 
F 6 HOH A 64 664 664 HOH HOH . 
F 6 HOH A 65 665 665 HOH HOH . 
F 6 HOH A 66 666 666 HOH HOH . 
F 6 HOH A 67 667 667 HOH HOH . 
F 6 HOH A 68 668 668 HOH HOH . 
F 6 HOH A 69 669 669 HOH HOH . 
F 6 HOH A 70 670 670 HOH HOH . 
F 6 HOH A 71 671 671 HOH HOH . 
F 6 HOH A 72 672 672 HOH HOH . 
F 6 HOH A 73 673 673 HOH HOH . 
F 6 HOH A 74 674 674 HOH HOH . 
F 6 HOH A 75 675 675 HOH HOH . 
F 6 HOH A 76 676 676 HOH HOH . 
F 6 HOH A 77 677 677 HOH HOH . 
F 6 HOH A 78 678 678 HOH HOH . 
F 6 HOH A 79 679 679 HOH HOH . 
F 6 HOH A 80 680 680 HOH HOH . 
F 6 HOH A 81 681 681 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 THF . . . E 5 13.087 23.599 15.992 1 28.42 ? N1 THF 501 A 1 
HETATM 2 C C2 THF . . . E 5 13.277 22.476 15.299 1 30.24 ? C2 THF 501 A 1 
HETATM 3 N NA2 THF . . . E 5 14.257 22.535 14.207 1 29.87 ? NA2 THF 501 A 1 
HETATM 4 N N3 THF . . . E 5 12.813 21.38 15.375 1 27.52 ? N3 THF 501 A 1 
HETATM 5 C C4 THF . . . E 5 11.751 21.306 16.244 1 25.15 ? C4 THF 501 A 1 
HETATM 6 O O4 THF . . . E 5 10.666 20.481 15.996 1 22.4 ? O4 THF 501 A 1 
HETATM 7 C C4A THF . . . E 5 11.798 22.129 17.439 1 29.88 ? C4A THF 501 A 1 
HETATM 8 N N5 THF . . . E 5 10.67 22.399 18.262 1 31.65 ? N5 THF 501 A 1 
HETATM 9 C C6 THF . . . E 5 10.777 23.396 19.442 1 32.89 ? C6 THF 501 A 1 
HETATM 10 C C7 THF . . . E 5 11.468 24.633 18.95 1 30.15 ? C7 THF 501 A 1 
HETATM 11 N N8 THF . . . E 5 11.78 24.469 17.651 1 26.11 ? N8 THF 501 A 1 
HETATM 12 C C8A THF . . . E 5 12.524 23.389 17.213 1 28.09 ? C8A THF 501 A 1 
HETATM 13 C C9 THF . . . E 5 11.525 22.85 20.655 1 39.15 ? C9 THF 501 A 1 
HETATM 14 N N10 THF . . . E 5 11.558 21.376 20.654 0 148.49 ? N10 THF 501 A 1 
HETATM 15 C C11 THF . . . E 5 13.284 18.91 23.742 0 148.49 ? C11 THF 501 A 1 
HETATM 16 C C12 THF . . . E 5 12.642 18.36 22.57 0 148.49 ? C12 THF 501 A 1 
HETATM 17 C C13 THF . . . E 5 12.082 19.166 21.537 0 148.49 ? C13 THF 501 A 1 
HETATM 18 C C14 THF . . . E 5 12.168 20.572 21.706 0 148.49 ? C14 THF 501 A 1 
HETATM 19 C C15 THF . . . E 5 12.802 21.166 22.859 0 148.49 ? C15 THF 501 A 1 
HETATM 20 C C16 THF . . . E 5 13.365 20.342 23.884 0 148.49 ? C16 THF 501 A 1 
HETATM 21 C C THF . . . E 5 13.809 17.954 24.719 0 148.49 ? C THF 501 A 1 
HETATM 22 O O THF . . . E 5 13.01 17.405 25.498 0 148.49 ? O THF 501 A 1 
HETATM 23 N N THF . . . E 5 15.143 17.665 24.805 0 148.49 ? N THF 501 A 1 
HETATM 24 C CA THF . . . E 5 15.661 16.509 25.578 0 148.49 ? CA THF 501 A 1 
HETATM 25 C CB THF . . . E 5 16.791 15.978 24.8 0 148.49 ? CB THF 501 A 1 
HETATM 26 C CG THF . . . E 5 16.864 14.452 24.902 0 148.49 ? CG THF 501 A 1 
HETATM 27 C CD THF . . . E 5 17.947 13.842 25.837 0 148.49 ? CD THF 501 A 1 
HETATM 28 O OE1 THF . . . E 5 17.581 13.284 26.894 0 148.49 ? OE1 THF 501 A 1 
HETATM 29 O OE2 THF . . . E 5 19.153 13.915 25.528 0 148.49 ? OE2 THF 501 A 1 
HETATM 30 C CT THF . . . E 5 15.977 16.754 27.098 0 148.49 ? CT THF 501 A 1 
HETATM 31 O O1 THF . . . E 5 17.034 17.351 27.405 0 148.49 ? O1 THF 501 A 1 
HETATM 32 O O2 THF . . . E 5 15.185 16.358 27.976 0 148.49 ? O2 THF 501 A 1 
HETATM 33 C CP1 THF . . . E 5 9.321 21.808 18.066 1 40.02 ? CP1 THF 501 A 1 
HETATM 34 O O3 THF . . . E 5 8.687 22.009 16.78 1 47.65 ? O3 THF 501 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           34 
#