data_1U7W # _model_server_result.job_id '_oQqakEQnJrz2vpO3ZpGIg' _model_server_result.datetime_utc '2024-12-06 04:10:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1u7w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 1U7W # _exptl.entry_id 1U7W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1U7W _cell.length_a 45.926 _cell.length_b 144.406 _cell.length_c 246.215 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U7W _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,J,K 1 1 C,H,I,L 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 45.926 0 123.1075 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 99 A ASP 279 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? metalc ? metalc2 A OD2 ASP 99 A ASP 279 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc3 E O1A CTP . A CTP 500 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc4 E O2B CTP . A CTP 500 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc5 E O1G CTP . A CTP 500 1_555 D CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? metalc ? metalc6 D CA CA . A CA 501 1_555 J O HOH . A HOH 2502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc7 D CA CA . A CA 501 1_555 J O HOH . A HOH 2503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc8 B OD2 ASP 99 B ASP 279 1_555 F CA CA . B CA 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc9 B OD1 ASP 99 B ASP 279 1_555 F CA CA . B CA 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? metalc ? metalc10 G O1A CTP . B CTP 1500 1_555 F CA CA . B CA 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc11 G O2B CTP . B CTP 1500 1_555 F CA CA . B CA 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc12 G O1G CTP . B CTP 1500 1_555 F CA CA . B CA 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.014 ? metalc ? metalc13 G O3G CTP . B CTP 1500 1_555 F CA CA . B CA 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.294 ? metalc ? metalc14 F CA CA . B CA 1501 1_555 K O HOH . B HOH 2504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc15 F CA CA . B CA 1501 1_555 K O HOH . B HOH 2505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc16 C OD1 ASP 99 C ASP 279 1_555 H CA CA . C CA 2501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc17 C OD2 ASP 99 C ASP 279 1_555 H CA CA . C CA 2501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc18 I O1A CTP . C CTP 2500 1_555 H CA CA . C CA 2501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc19 I O2B CTP . C CTP 2500 1_555 H CA CA . C CA 2501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc20 I O1G CTP . C CTP 2500 1_555 H CA CA . C CA 2501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.011 ? metalc ? metalc21 I O2G CTP . C CTP 2500 1_555 H CA CA . C CA 2501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.264 ? metalc ? metalc22 H CA CA . C CA 2501 1_555 L O HOH . C HOH 2506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc23 H CA CA . C CA 2501 1_555 L O HOH . C HOH 2507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1U7W _atom_sites.fract_transf_matrix[1][1] 0.021774 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006925 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CA A 1 501 501 CA CA . E 3 CTP A 1 500 500 CTP CTP . F 2 CA B 1 1501 501 CA CA . G 3 CTP B 1 1500 500 CTP CTP . H 2 CA C 1 2501 501 CA CA . I 3 CTP C 1 2500 500 CTP CTP . J 4 HOH A 1 2 2 HOH TIP . J 4 HOH A 2 3 3 HOH TIP . J 4 HOH A 3 4 4 HOH TIP . J 4 HOH A 4 7 7 HOH TIP . J 4 HOH A 5 16 16 HOH TIP . J 4 HOH A 6 19 19 HOH TIP . J 4 HOH A 7 22 22 HOH TIP . J 4 HOH A 8 23 23 HOH TIP . J 4 HOH A 9 26 26 HOH TIP . J 4 HOH A 10 27 27 HOH TIP . J 4 HOH A 11 29 29 HOH TIP . J 4 HOH A 12 31 31 HOH TIP . J 4 HOH A 13 32 32 HOH TIP . J 4 HOH A 14 36 36 HOH TIP . J 4 HOH A 15 40 40 HOH TIP . J 4 HOH A 16 46 46 HOH TIP . J 4 HOH A 17 51 51 HOH TIP . J 4 HOH A 18 56 56 HOH TIP . J 4 HOH A 19 59 59 HOH TIP . J 4 HOH A 20 67 67 HOH TIP . J 4 HOH A 21 74 74 HOH TIP . J 4 HOH A 22 77 77 HOH TIP . J 4 HOH A 23 82 82 HOH TIP . J 4 HOH A 24 91 91 HOH TIP . J 4 HOH A 25 94 94 HOH TIP . J 4 HOH A 26 95 95 HOH TIP . J 4 HOH A 27 101 101 HOH TIP . J 4 HOH A 28 102 102 HOH TIP . J 4 HOH A 29 106 106 HOH TIP . J 4 HOH A 30 108 108 HOH TIP . J 4 HOH A 31 109 109 HOH TIP . J 4 HOH A 32 112 112 HOH TIP . J 4 HOH A 33 113 113 HOH TIP . J 4 HOH A 34 114 114 HOH TIP . J 4 HOH A 35 115 115 HOH TIP . J 4 HOH A 36 117 117 HOH TIP . J 4 HOH A 37 119 119 HOH TIP . J 4 HOH A 38 123 123 HOH TIP . J 4 HOH A 39 125 125 HOH TIP . J 4 HOH A 40 132 132 HOH TIP . J 4 HOH A 41 133 133 HOH TIP . J 4 HOH A 42 135 135 HOH TIP . J 4 HOH A 43 147 147 HOH TIP . J 4 HOH A 44 148 148 HOH TIP . J 4 HOH A 45 149 149 HOH TIP . J 4 HOH A 46 150 150 HOH TIP . J 4 HOH A 47 151 151 HOH TIP . J 4 HOH A 48 155 155 HOH TIP . J 4 HOH A 49 159 159 HOH TIP . J 4 HOH A 50 2502 502 HOH TIP . J 4 HOH A 51 2503 503 HOH TIP . K 4 HOH B 1 1 1 HOH TIP . K 4 HOH B 2 8 8 HOH TIP . K 4 HOH B 3 9 9 HOH TIP . K 4 HOH B 4 10 10 HOH TIP . K 4 HOH B 5 11 11 HOH TIP . K 4 HOH B 6 12 12 HOH TIP . K 4 HOH B 7 13 13 HOH TIP . K 4 HOH B 8 14 14 HOH TIP . K 4 HOH B 9 15 15 HOH TIP . K 4 HOH B 10 17 17 HOH TIP . K 4 HOH B 11 21 21 HOH TIP . K 4 HOH B 12 24 24 HOH TIP . K 4 HOH B 13 25 25 HOH TIP . K 4 HOH B 14 33 33 HOH TIP . K 4 HOH B 15 34 34 HOH TIP . K 4 HOH B 16 37 37 HOH TIP . K 4 HOH B 17 38 38 HOH TIP . K 4 HOH B 18 39 39 HOH TIP . K 4 HOH B 19 41 41 HOH TIP . K 4 HOH B 20 42 42 HOH TIP . K 4 HOH B 21 44 44 HOH TIP . K 4 HOH B 22 47 47 HOH TIP . K 4 HOH B 23 49 49 HOH TIP . K 4 HOH B 24 50 50 HOH TIP . K 4 HOH B 25 54 54 HOH TIP . K 4 HOH B 26 55 55 HOH TIP . K 4 HOH B 27 57 57 HOH TIP . K 4 HOH B 28 61 61 HOH TIP . K 4 HOH B 29 62 62 HOH TIP . K 4 HOH B 30 64 64 HOH TIP . K 4 HOH B 31 65 65 HOH TIP . K 4 HOH B 32 66 66 HOH TIP . K 4 HOH B 33 69 69 HOH TIP . K 4 HOH B 34 70 70 HOH TIP . K 4 HOH B 35 78 78 HOH TIP . K 4 HOH B 36 79 79 HOH TIP . K 4 HOH B 37 85 85 HOH TIP . K 4 HOH B 38 86 86 HOH TIP . K 4 HOH B 39 87 87 HOH TIP . K 4 HOH B 40 88 88 HOH TIP . K 4 HOH B 41 90 90 HOH TIP . K 4 HOH B 42 92 92 HOH TIP . K 4 HOH B 43 99 99 HOH TIP . K 4 HOH B 44 100 100 HOH TIP . K 4 HOH B 45 103 103 HOH TIP . K 4 HOH B 46 104 104 HOH TIP . K 4 HOH B 47 107 107 HOH TIP . K 4 HOH B 48 116 116 HOH TIP . K 4 HOH B 49 120 120 HOH TIP . K 4 HOH B 50 126 126 HOH TIP . K 4 HOH B 51 127 127 HOH TIP . K 4 HOH B 52 128 128 HOH TIP . K 4 HOH B 53 131 131 HOH TIP . K 4 HOH B 54 138 138 HOH TIP . K 4 HOH B 55 139 139 HOH TIP . K 4 HOH B 56 140 140 HOH TIP . K 4 HOH B 57 141 141 HOH TIP . K 4 HOH B 58 142 142 HOH TIP . K 4 HOH B 59 143 143 HOH TIP . K 4 HOH B 60 145 145 HOH TIP . K 4 HOH B 61 146 146 HOH TIP . K 4 HOH B 62 152 152 HOH TIP . K 4 HOH B 63 153 153 HOH TIP . K 4 HOH B 64 154 154 HOH TIP . K 4 HOH B 65 156 156 HOH TIP . K 4 HOH B 66 157 157 HOH TIP . K 4 HOH B 67 2504 502 HOH TIP . K 4 HOH B 68 2505 503 HOH TIP . L 4 HOH C 1 5 5 HOH TIP . L 4 HOH C 2 6 6 HOH TIP . L 4 HOH C 3 18 18 HOH TIP . L 4 HOH C 4 20 20 HOH TIP . L 4 HOH C 5 28 28 HOH TIP . L 4 HOH C 6 30 30 HOH TIP . L 4 HOH C 7 35 35 HOH TIP . L 4 HOH C 8 43 43 HOH TIP . L 4 HOH C 9 45 45 HOH TIP . L 4 HOH C 10 48 48 HOH TIP . L 4 HOH C 11 52 52 HOH TIP . L 4 HOH C 12 53 53 HOH TIP . L 4 HOH C 13 58 58 HOH TIP . L 4 HOH C 14 60 60 HOH TIP . L 4 HOH C 15 63 63 HOH TIP . L 4 HOH C 16 68 68 HOH TIP . L 4 HOH C 17 71 71 HOH TIP . L 4 HOH C 18 72 72 HOH TIP . L 4 HOH C 19 73 73 HOH TIP . L 4 HOH C 20 75 75 HOH TIP . L 4 HOH C 21 76 76 HOH TIP . L 4 HOH C 22 80 80 HOH TIP . L 4 HOH C 23 81 81 HOH TIP . L 4 HOH C 24 83 83 HOH TIP . L 4 HOH C 25 84 84 HOH TIP . L 4 HOH C 26 89 89 HOH TIP . L 4 HOH C 27 93 93 HOH TIP . L 4 HOH C 28 96 96 HOH TIP . L 4 HOH C 29 97 97 HOH TIP . L 4 HOH C 30 98 98 HOH TIP . L 4 HOH C 31 105 105 HOH TIP . L 4 HOH C 32 110 110 HOH TIP . L 4 HOH C 33 111 111 HOH TIP . L 4 HOH C 34 118 118 HOH TIP . L 4 HOH C 35 121 121 HOH TIP . L 4 HOH C 36 122 122 HOH TIP . L 4 HOH C 37 124 124 HOH TIP . L 4 HOH C 38 129 129 HOH TIP . L 4 HOH C 39 130 130 HOH TIP . L 4 HOH C 40 134 134 HOH TIP . L 4 HOH C 41 136 136 HOH TIP . L 4 HOH C 42 137 137 HOH TIP . L 4 HOH C 43 144 144 HOH TIP . L 4 HOH C 44 158 158 HOH TIP . L 4 HOH C 45 2506 502 HOH TIP . L 4 HOH C 46 2507 503 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 36.096 _atom_site.Cartn_y 58.988 _atom_site.Cartn_z 139.896 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 67.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 61 _model_server_stats.query_time_ms 516 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #