data_1U8B # _model_server_result.job_id ahpzbpSpuUcDeX464RdbvA _model_server_result.datetime_utc '2025-02-27 12:05:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1u8b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":150}' # _entry.id 1U8B # _exptl.entry_id 1U8B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1U8B _cell.length_a 28.842 _cell.length_b 84.593 _cell.length_c 108.357 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U8B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 E C MSE 1 A MSE 1 1_555 E N LYS 2 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 E C PHE 31 A PHE 37 1_555 E N SMC 32 A SMC 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 E C SMC 32 A SMC 38 1_555 E N ARG 33 A ARG 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 E C ALA 104 A ALA 110 1_555 E N MSE 105 A MSE 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 E C MSE 105 A MSE 111 1_555 E N SER 106 A SER 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 E C GLY 119 A GLY 125 1_555 E N MSE 120 A MSE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 E C MSE 120 A MSE 126 1_555 E N THR 121 A THR 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 E SG SMC 32 A SMC 38 1_555 F ZN ZN . A ZN 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc2 E SG CYS 36 A CYS 42 1_555 F ZN ZN . A ZN 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc3 E SG CYS 63 A CYS 69 1_555 F ZN ZN . A ZN 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc4 E SG CYS 66 A CYS 72 1_555 F ZN ZN . A ZN 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? hydrog WATSON-CRICK hydrog1 A N1 DA 2 B DA 201 1_555 B N3 DT 5 C DT 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N6 DA 2 B DA 201 1_555 B O4 DT 5 C DT 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N1 DA 3 B DA 202 1_555 B N3 DT 4 C DT 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N6 DA 3 B DA 202 1_555 B O4 DT 4 C DT 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N1 DA 4 B DA 203 1_555 B N3 DT 3 C DT 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N6 DA 4 B DA 203 1_555 B O4 DT 3 C DT 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DT 5 B DT 204 1_555 B N1 DA 2 C DA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O4 DT 5 B DT 204 1_555 B N6 DA 2 C DA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N3 DT 6 B DT 205 1_555 B N1 DA 1 C DA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O4 DT 6 B DT 205 1_555 B N6 DA 1 C DA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 C N1 DA 1 D DA 401 1_555 D N3 DT 13 E DT 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 C N6 DA 1 D DA 401 1_555 D O4 DT 13 E DT 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 C N1 DA 2 D DA 402 1_555 D N3 DT 12 E DT 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 C N6 DA 2 D DA 402 1_555 D O4 DT 12 E DT 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 C N1 DA 3 D DA 403 1_555 D N3 DT 11 E DT 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 C N6 DA 3 D DA 403 1_555 D O4 DT 11 E DT 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 C N1 DG 4 D DG 404 1_555 D N3 DC 10 E DC 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 C N2 DG 4 D DG 404 1_555 D O2 DC 10 E DC 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 C O6 DG 4 D DG 404 1_555 D N4 DC 10 E DC 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 C N3 DC 5 D DC 405 1_555 D N1 DG 9 E DG 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 C N4 DC 5 D DC 405 1_555 D O6 DG 9 E DG 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 C O2 DC 5 D DC 405 1_555 D N2 DG 9 E DG 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 C N1 DG 6 D DG 406 1_555 D N3 DC 8 E DC 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 C N2 DG 6 D DG 406 1_555 D O2 DC 8 E DC 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 C O6 DG 6 D DG 406 1_555 D N4 DC 8 E DC 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 C N3 DC 7 D DC 407 1_555 D N1 DG 7 E DG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 C N4 DC 7 D DC 407 1_555 D O6 DG 7 E DG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 C O2 DC 7 D DC 407 1_555 D N2 DG 7 E DG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 C N1 DA 8 D DA 408 1_555 D N3 DT 6 E DT 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 C N6 DA 8 D DA 408 1_555 D O4 DT 6 E DT 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 C N1 DA 9 D DA 409 1_555 D N3 DT 5 E DT 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 C N6 DA 9 D DA 409 1_555 D O4 DT 5 E DT 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 C N1 DG 10 D DG 410 1_555 D N3 DC 4 E DC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 C N2 DG 10 D DG 410 1_555 D O2 DC 4 E DC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog35 C O6 DG 10 D DG 410 1_555 D N4 DC 4 E DC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog36 C N1 DA 11 D DA 411 1_555 D N3 DT 3 E DT 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog37 C N6 DA 11 D DA 411 1_555 D O4 DT 3 E DT 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog38 C N3 DT 12 D DT 412 1_555 D N1 DA 2 E DA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog39 C O4 DT 12 D DT 412 1_555 D N6 DA 2 E DA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1U8B _atom_sites.fract_transf_matrix[1][1] 0.034672 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011821 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009229 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 ZN A 1 150 150 ZN ZN . G 7 HOH B 1 2 2 HOH HOH . G 7 HOH B 2 19 19 HOH HOH . G 7 HOH B 3 28 28 HOH HOH . G 7 HOH B 4 32 32 HOH HOH . G 7 HOH B 5 38 38 HOH HOH . G 7 HOH B 6 50 50 HOH HOH . H 7 HOH C 1 4 4 HOH HOH . H 7 HOH C 2 5 5 HOH HOH . H 7 HOH C 3 14 14 HOH HOH . H 7 HOH C 4 24 24 HOH HOH . H 7 HOH C 5 31 31 HOH HOH . H 7 HOH C 6 34 34 HOH HOH . H 7 HOH C 7 37 37 HOH HOH . H 7 HOH C 8 45 45 HOH HOH . H 7 HOH C 9 47 47 HOH HOH . H 7 HOH C 10 48 48 HOH HOH . H 7 HOH C 11 63 63 HOH HOH . H 7 HOH C 12 89 89 HOH HOH . I 7 HOH D 1 7 7 HOH HOH . I 7 HOH D 2 17 17 HOH HOH . I 7 HOH D 3 20 20 HOH HOH . I 7 HOH D 4 23 23 HOH HOH . I 7 HOH D 5 27 27 HOH HOH . I 7 HOH D 6 29 29 HOH HOH . I 7 HOH D 7 35 35 HOH HOH . I 7 HOH D 8 36 36 HOH HOH . I 7 HOH D 9 61 61 HOH HOH . I 7 HOH D 10 65 65 HOH HOH . I 7 HOH D 11 66 66 HOH HOH . I 7 HOH D 12 80 80 HOH HOH . I 7 HOH D 13 83 83 HOH HOH . J 7 HOH E 1 8 8 HOH HOH . J 7 HOH E 2 10 10 HOH HOH . J 7 HOH E 3 12 12 HOH HOH . J 7 HOH E 4 30 30 HOH HOH . J 7 HOH E 5 33 33 HOH HOH . J 7 HOH E 6 52 52 HOH HOH . J 7 HOH E 7 59 59 HOH HOH . J 7 HOH E 8 64 64 HOH HOH . J 7 HOH E 9 81 81 HOH HOH . J 7 HOH E 10 82 82 HOH HOH . J 7 HOH E 11 86 86 HOH HOH . K 7 HOH A 1 151 1 HOH HOH . K 7 HOH A 2 152 3 HOH HOH . K 7 HOH A 3 153 6 HOH HOH . K 7 HOH A 4 154 9 HOH HOH . K 7 HOH A 5 155 11 HOH HOH . K 7 HOH A 6 156 13 HOH HOH . K 7 HOH A 7 157 15 HOH HOH . K 7 HOH A 8 158 16 HOH HOH . K 7 HOH A 9 159 18 HOH HOH . K 7 HOH A 10 160 21 HOH HOH . K 7 HOH A 11 161 22 HOH HOH . K 7 HOH A 12 162 26 HOH HOH . K 7 HOH A 13 163 39 HOH HOH . K 7 HOH A 14 164 40 HOH HOH . K 7 HOH A 15 165 41 HOH HOH . K 7 HOH A 16 166 42 HOH HOH . K 7 HOH A 17 167 43 HOH HOH . K 7 HOH A 18 168 44 HOH HOH . K 7 HOH A 19 169 46 HOH HOH . K 7 HOH A 20 170 49 HOH HOH . K 7 HOH A 21 171 51 HOH HOH . K 7 HOH A 22 172 53 HOH HOH . K 7 HOH A 23 173 54 HOH HOH . K 7 HOH A 24 174 55 HOH HOH . K 7 HOH A 25 175 56 HOH HOH . K 7 HOH A 26 176 57 HOH HOH . K 7 HOH A 27 177 58 HOH HOH . K 7 HOH A 28 178 60 HOH HOH . K 7 HOH A 29 179 62 HOH HOH . K 7 HOH A 30 180 67 HOH HOH . K 7 HOH A 31 181 68 HOH HOH . K 7 HOH A 32 182 69 HOH HOH . K 7 HOH A 33 183 70 HOH HOH . K 7 HOH A 34 184 71 HOH HOH . K 7 HOH A 35 185 72 HOH HOH . K 7 HOH A 36 186 73 HOH HOH . K 7 HOH A 37 187 74 HOH HOH . K 7 HOH A 38 188 75 HOH HOH . K 7 HOH A 39 189 76 HOH HOH . K 7 HOH A 40 190 77 HOH HOH . K 7 HOH A 41 191 78 HOH HOH . K 7 HOH A 42 192 79 HOH HOH . K 7 HOH A 43 193 84 HOH HOH . K 7 HOH A 44 194 85 HOH HOH . K 7 HOH A 45 195 87 HOH HOH . K 7 HOH A 46 196 88 HOH HOH . K 7 HOH A 47 197 90 HOH HOH . K 7 HOH A 48 198 91 HOH HOH . K 7 HOH A 49 199 92 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x 20.217 _atom_site.Cartn_y 28.113 _atom_site.Cartn_z 25.978 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 150 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #