data_1U8U # _model_server_result.job_id Mo1kUte2i6dax0puQVkDQQ _model_server_result.datetime_utc '2024-11-20 02:26:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1u8u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 1U8U # _exptl.entry_id 1U8U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 144.211 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OCTANOIC ACID (CAPRYLIC ACID)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1U8U _cell.length_a 50.425 _cell.length_b 50.425 _cell.length_c 172.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U8U _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 50.425 50.425 86.025 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H16 O2' _chem_comp.formula_weight 144.211 _chem_comp.id OCA _chem_comp.mon_nstd_flag . _chem_comp.name 'OCTANOIC ACID (CAPRYLIC ACID)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OCA sing 237 n n C1 O1 OCA doub 238 n n C1 O2 OCA sing 239 n n C2 C3 OCA sing 240 n n C2 H21 OCA sing 241 n n C2 H22 OCA sing 242 n n C3 C4 OCA sing 243 n n C3 H31 OCA sing 244 n n C3 H32 OCA sing 245 n n C4 C5 OCA sing 246 n n C4 H41 OCA sing 247 n n C4 H42 OCA sing 248 n n C5 C6 OCA sing 249 n n C5 H51 OCA sing 250 n n C5 H52 OCA sing 251 n n C6 C7 OCA sing 252 n n C6 H61 OCA sing 253 n n C6 H62 OCA sing 254 n n C7 C8 OCA sing 255 n n C7 H71 OCA sing 256 n n C7 H72 OCA sing 257 n n C8 H81 OCA sing 258 n n C8 H82 OCA sing 259 n n C8 H83 OCA sing 260 n n O2 HO2 OCA sing 261 n n # _atom_sites.entry_id 1U8U _atom_sites.fract_transf_matrix[1][1] 0.019831 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 501 501 SO4 SO4 . C 3 OCA A 1 201 201 OCA OCA . D 4 GOL A 1 301 301 GOL GOL . E 4 GOL A 1 302 302 GOL GOL . F 4 GOL A 1 303 303 GOL GOL . G 5 HOH A 1 502 1 HOH TIP . G 5 HOH A 2 503 2 HOH TIP . G 5 HOH A 3 504 3 HOH TIP . G 5 HOH A 4 505 4 HOH TIP . G 5 HOH A 5 506 5 HOH TIP . G 5 HOH A 6 507 6 HOH TIP . G 5 HOH A 7 508 7 HOH TIP . G 5 HOH A 8 509 8 HOH TIP . G 5 HOH A 9 510 9 HOH TIP . G 5 HOH A 10 511 10 HOH TIP . G 5 HOH A 11 512 11 HOH TIP . G 5 HOH A 12 513 12 HOH TIP . G 5 HOH A 13 514 13 HOH TIP . G 5 HOH A 14 515 14 HOH TIP . G 5 HOH A 15 516 15 HOH TIP . G 5 HOH A 16 517 16 HOH TIP . G 5 HOH A 17 518 17 HOH TIP . G 5 HOH A 18 519 18 HOH TIP . G 5 HOH A 19 520 19 HOH TIP . G 5 HOH A 20 521 20 HOH TIP . G 5 HOH A 21 522 21 HOH TIP . G 5 HOH A 22 523 22 HOH TIP . G 5 HOH A 23 524 23 HOH TIP . G 5 HOH A 24 525 24 HOH TIP . G 5 HOH A 25 526 25 HOH TIP . G 5 HOH A 26 527 26 HOH TIP . G 5 HOH A 27 528 27 HOH TIP . G 5 HOH A 28 529 28 HOH TIP . G 5 HOH A 29 530 29 HOH TIP . G 5 HOH A 30 531 30 HOH TIP . G 5 HOH A 31 532 31 HOH TIP . G 5 HOH A 32 533 32 HOH TIP . G 5 HOH A 33 534 33 HOH TIP . G 5 HOH A 34 535 34 HOH TIP . G 5 HOH A 35 536 35 HOH TIP . G 5 HOH A 36 537 36 HOH TIP . G 5 HOH A 37 538 37 HOH TIP . G 5 HOH A 38 539 38 HOH TIP . G 5 HOH A 39 540 39 HOH TIP . G 5 HOH A 40 541 40 HOH TIP . G 5 HOH A 41 542 41 HOH TIP . G 5 HOH A 42 543 42 HOH TIP . G 5 HOH A 43 544 43 HOH TIP . G 5 HOH A 44 545 44 HOH TIP . G 5 HOH A 45 546 45 HOH TIP . G 5 HOH A 46 547 46 HOH TIP . G 5 HOH A 47 548 47 HOH TIP . G 5 HOH A 48 549 48 HOH TIP . G 5 HOH A 49 550 49 HOH TIP . G 5 HOH A 50 551 50 HOH TIP . G 5 HOH A 51 552 51 HOH TIP . G 5 HOH A 52 553 52 HOH TIP . G 5 HOH A 53 554 53 HOH TIP . G 5 HOH A 54 555 54 HOH TIP . G 5 HOH A 55 556 55 HOH TIP . G 5 HOH A 56 557 56 HOH TIP . G 5 HOH A 57 558 57 HOH TIP . G 5 HOH A 58 559 58 HOH TIP . G 5 HOH A 59 560 59 HOH TIP . G 5 HOH A 60 561 60 HOH TIP . G 5 HOH A 61 562 61 HOH TIP . G 5 HOH A 62 563 62 HOH TIP . G 5 HOH A 63 564 63 HOH TIP . G 5 HOH A 64 565 64 HOH TIP . G 5 HOH A 65 566 65 HOH TIP . G 5 HOH A 66 567 66 HOH TIP . G 5 HOH A 67 568 67 HOH TIP . G 5 HOH A 68 569 68 HOH TIP . G 5 HOH A 69 570 69 HOH TIP . G 5 HOH A 70 571 70 HOH TIP . G 5 HOH A 71 572 71 HOH TIP . G 5 HOH A 72 573 72 HOH TIP . G 5 HOH A 73 574 73 HOH TIP . G 5 HOH A 74 575 74 HOH TIP . G 5 HOH A 75 576 75 HOH TIP . G 5 HOH A 76 577 76 HOH TIP . G 5 HOH A 77 578 77 HOH TIP . G 5 HOH A 78 579 78 HOH TIP . G 5 HOH A 79 580 79 HOH TIP . G 5 HOH A 80 581 80 HOH TIP . G 5 HOH A 81 582 81 HOH TIP . G 5 HOH A 82 583 82 HOH TIP . G 5 HOH A 83 584 83 HOH TIP . G 5 HOH A 84 585 84 HOH TIP . G 5 HOH A 85 586 85 HOH TIP . G 5 HOH A 86 587 86 HOH TIP . G 5 HOH A 87 588 87 HOH TIP . G 5 HOH A 88 589 88 HOH TIP . G 5 HOH A 89 590 89 HOH TIP . G 5 HOH A 90 591 90 HOH TIP . G 5 HOH A 91 592 91 HOH TIP . G 5 HOH A 92 593 92 HOH TIP . G 5 HOH A 93 594 93 HOH TIP . G 5 HOH A 94 595 94 HOH TIP . G 5 HOH A 95 596 95 HOH TIP . G 5 HOH A 96 597 96 HOH TIP . G 5 HOH A 97 598 97 HOH TIP . G 5 HOH A 98 599 98 HOH TIP . G 5 HOH A 99 600 99 HOH TIP . G 5 HOH A 100 601 100 HOH TIP . G 5 HOH A 101 602 101 HOH TIP . G 5 HOH A 102 603 102 HOH TIP . G 5 HOH A 103 604 103 HOH TIP . G 5 HOH A 104 605 104 HOH TIP . G 5 HOH A 105 606 105 HOH TIP . G 5 HOH A 106 607 106 HOH TIP . G 5 HOH A 107 608 107 HOH TIP . G 5 HOH A 108 609 108 HOH TIP . G 5 HOH A 109 610 109 HOH TIP . G 5 HOH A 110 611 110 HOH TIP . G 5 HOH A 111 612 111 HOH TIP . G 5 HOH A 112 613 112 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OCA . . . C 3 7.011 35.083 50.514 1 41.59 ? C1 OCA 201 A 1 HETATM 2 C C2 OCA . . . C 3 6.977 34.331 51.835 1 42.03 ? C2 OCA 201 A 1 HETATM 3 C C3 OCA . . . C 3 5.643 34.198 52.569 1 44.77 ? C3 OCA 201 A 1 HETATM 4 C C4 OCA . . . C 3 5.923 34.236 54.055 1 45.46 ? C4 OCA 201 A 1 HETATM 5 C C5 OCA . . . C 3 4.841 33.527 54.836 1 46.36 ? C5 OCA 201 A 1 HETATM 6 C C6 OCA . . . C 3 5.182 33.215 56.289 1 46.31 ? C6 OCA 201 A 1 HETATM 7 C C7 OCA . . . C 3 4.04 33.572 57.225 1 46.44 ? C7 OCA 201 A 1 HETATM 8 C C8 OCA . . . C 3 4.277 34.686 58.259 1 47.17 ? C8 OCA 201 A 1 HETATM 9 O O1 OCA . . . C 3 7.119 36.368 50.66 1 38.9 ? O1 OCA 201 A 1 HETATM 10 O O2 OCA . . . C 3 6.968 34.424 49.404 1 41.42 ? O2 OCA 201 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #