data_1U9V # _model_server_result.job_id 8dZ0FnY-vI8WXr-jADP91w _model_server_result.datetime_utc '2025-07-03 09:17:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1u9v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1U9V # _exptl.entry_id 1U9V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 368.479 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-(CYCLOHEXYLAMINO)-9-[2-(4-METHYLPIPERAZIN-1-YL)-ETHYL]-9H-PURINE-2-CARBONITRILE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1U9V _cell.length_a 63.2 _cell.length_b 63.2 _cell.length_c 113.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U9V _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 22 1_555 A SG CYS 65 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 58 A CYS 56 1_555 A SG CYS 98 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? disulf ? disulf3 A SG CYS 157 A CYS 155 1_555 A SG CYS 206 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? covale ? covale1 A SG CYS 27 A CYS 25 1_555 B C27 IHE . A IHE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? # _chem_comp.formula 'C19 H28 N8' _chem_comp.formula_weight 368.479 _chem_comp.id IHE _chem_comp.mon_nstd_flag . _chem_comp.name 6-(CYCLOHEXYLAMINO)-9-[2-(4-METHYLPIPERAZIN-1-YL)-ETHYL]-9H-PURINE-2-CARBONITRILE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms NVP-ABE854 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C04 IHE sing 152 n n C01 N06 IHE sing 153 n n C01 H011 IHE sing 154 n n C01 H012 IHE sing 155 n n C02 N03 IHE sing 156 n n C02 C05 IHE sing 157 n n C02 H021 IHE sing 158 n n C02 H022 IHE sing 159 n n N03 C04 IHE sing 160 n n N03 C15 IHE sing 161 n n C04 H041 IHE sing 162 n n C04 H042 IHE sing 163 n n C05 N06 IHE sing 164 n n C05 H051 IHE sing 165 n n C05 H052 IHE sing 166 n n N06 C16 IHE sing 167 n n C15 H151 IHE sing 168 n n C15 H152 IHE sing 169 n n C15 H153 IHE sing 170 n n C16 C17 IHE sing 171 n n C16 H161 IHE sing 172 n n C16 H162 IHE sing 173 n n C17 N18 IHE sing 174 n n C17 H171 IHE sing 175 n n C17 H172 IHE sing 176 n n N18 C19 IHE sing 177 n y N18 C21 IHE sing 178 n y C19 N20 IHE doub 179 n y C19 H19 IHE sing 180 n n N20 C26 IHE sing 181 n y C21 N22 IHE doub 182 n y C21 C26 IHE sing 183 n y N22 C23 IHE sing 184 n y C23 N24 IHE doub 185 n y C23 C27 IHE sing 186 n n N24 C25 IHE sing 187 n y C25 C26 IHE doub 188 n y C25 N28 IHE sing 189 n n N28 C29 IHE sing 190 n n N28 H28 IHE sing 191 n n C29 C30 IHE sing 192 n n C29 C34 IHE sing 193 n n C29 H29 IHE sing 194 n n C30 C31 IHE sing 195 n n C30 H301 IHE sing 196 n n C30 H302 IHE sing 197 n n C31 C32 IHE sing 198 n n C31 H311 IHE sing 199 n n C31 H312 IHE sing 200 n n C32 C33 IHE sing 201 n n C32 H321 IHE sing 202 n n C32 H322 IHE sing 203 n n C33 C34 IHE sing 204 n n C33 H331 IHE sing 205 n n C33 H332 IHE sing 206 n n C34 H341 IHE sing 207 n n C34 H342 IHE sing 208 n n N35 C27 IHE trip 209 n n # _atom_sites.entry_id 1U9V _atom_sites.fract_transf_matrix[1][1] 0.015823 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015823 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008787 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IHE A 1 300 300 IHE IHE . C 3 HOH A 1 402 402 HOH HOH . C 3 HOH A 2 403 403 HOH HOH . C 3 HOH A 3 404 404 HOH HOH . C 3 HOH A 4 405 405 HOH HOH . C 3 HOH A 5 406 406 HOH HOH . C 3 HOH A 6 407 407 HOH HOH . C 3 HOH A 7 408 408 HOH HOH . C 3 HOH A 8 409 409 HOH HOH . C 3 HOH A 9 410 410 HOH HOH . C 3 HOH A 10 411 411 HOH HOH . C 3 HOH A 11 412 412 HOH HOH . C 3 HOH A 12 414 414 HOH HOH . C 3 HOH A 13 415 415 HOH HOH . C 3 HOH A 14 416 416 HOH HOH . C 3 HOH A 15 417 417 HOH HOH . C 3 HOH A 16 419 419 HOH HOH . C 3 HOH A 17 421 421 HOH HOH . C 3 HOH A 18 422 422 HOH HOH . C 3 HOH A 19 423 423 HOH HOH . C 3 HOH A 20 424 424 HOH HOH . C 3 HOH A 21 425 425 HOH HOH . C 3 HOH A 22 426 426 HOH HOH . C 3 HOH A 23 429 429 HOH HOH . C 3 HOH A 24 430 430 HOH HOH . C 3 HOH A 25 431 431 HOH HOH . C 3 HOH A 26 434 434 HOH HOH . C 3 HOH A 27 436 436 HOH HOH . C 3 HOH A 28 437 437 HOH HOH . C 3 HOH A 29 441 441 HOH HOH . C 3 HOH A 30 442 442 HOH HOH . C 3 HOH A 31 443 443 HOH HOH . C 3 HOH A 32 444 444 HOH HOH . C 3 HOH A 33 446 446 HOH HOH . C 3 HOH A 34 448 448 HOH HOH . C 3 HOH A 35 450 450 HOH HOH . C 3 HOH A 36 451 451 HOH HOH . C 3 HOH A 37 452 452 HOH HOH . C 3 HOH A 38 453 453 HOH HOH . C 3 HOH A 39 455 455 HOH HOH . C 3 HOH A 40 459 459 HOH HOH . C 3 HOH A 41 463 463 HOH HOH . C 3 HOH A 42 466 466 HOH HOH . C 3 HOH A 43 467 467 HOH HOH . C 3 HOH A 44 468 468 HOH HOH . C 3 HOH A 45 469 469 HOH HOH . C 3 HOH A 46 472 472 HOH HOH . C 3 HOH A 47 479 479 HOH HOH . C 3 HOH A 48 486 486 HOH HOH . C 3 HOH A 49 491 491 HOH HOH . C 3 HOH A 50 492 492 HOH HOH . C 3 HOH A 51 493 493 HOH HOH . C 3 HOH A 52 496 496 HOH HOH . C 3 HOH A 53 497 497 HOH HOH . C 3 HOH A 54 501 501 HOH HOH . C 3 HOH A 55 503 503 HOH HOH . C 3 HOH A 56 506 506 HOH HOH . C 3 HOH A 57 508 508 HOH HOH . C 3 HOH A 58 515 515 HOH HOH . C 3 HOH A 59 517 517 HOH HOH . C 3 HOH A 60 522 522 HOH HOH . C 3 HOH A 61 533 533 HOH HOH . C 3 HOH A 62 548 548 HOH HOH . C 3 HOH A 63 552 552 HOH HOH . C 3 HOH A 64 561 561 HOH HOH . C 3 HOH A 65 570 570 HOH HOH . C 3 HOH A 66 572 572 HOH HOH . C 3 HOH A 67 577 577 HOH HOH . C 3 HOH A 68 594 594 HOH HOH . C 3 HOH A 69 613 613 HOH HOH . C 3 HOH A 70 650 650 HOH HOH . C 3 HOH A 71 651 651 HOH HOH . C 3 HOH A 72 652 652 HOH HOH . C 3 HOH A 73 653 653 HOH HOH . C 3 HOH A 74 655 655 HOH HOH . C 3 HOH A 75 656 656 HOH HOH . C 3 HOH A 76 657 657 HOH HOH . C 3 HOH A 77 658 658 HOH HOH . C 3 HOH A 78 659 659 HOH HOH . C 3 HOH A 79 660 660 HOH HOH . C 3 HOH A 80 661 661 HOH HOH . C 3 HOH A 81 662 662 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 IHE . . . B 2 62.379 15.303 -12.154 1 22.78 ? C01 IHE 300 A 1 HETATM 2 C C02 IHE . . . B 2 63.038 12.504 -12.793 1 26.48 ? C02 IHE 300 A 1 HETATM 3 N N03 IHE . . . B 2 62.363 13.403 -13.789 1 26.99 ? N03 IHE 300 A 1 HETATM 4 C C04 IHE . . . B 2 61.522 14.463 -13.123 1 23.1 ? C04 IHE 300 A 1 HETATM 5 C C05 IHE . . . B 2 63.908 13.328 -11.823 1 22.26 ? C05 IHE 300 A 1 HETATM 6 N N06 IHE . . . B 2 63.076 14.398 -11.158 1 24.66 ? N06 IHE 300 A 1 HETATM 7 C C15 IHE . . . B 2 61.539 12.588 -14.724 1 27.56 ? C15 IHE 300 A 1 HETATM 8 C C16 IHE . . . B 2 63.94 15.22 -10.207 1 19.94 ? C16 IHE 300 A 1 HETATM 9 C C17 IHE . . . B 2 64.446 14.417 -8.963 1 20.27 ? C17 IHE 300 A 1 HETATM 10 N N18 IHE . . . B 2 63.314 13.757 -8.291 1 19.4 ? N18 IHE 300 A 1 HETATM 11 C C19 IHE . . . B 2 62.95 12.407 -8.373 1 21.55 ? C19 IHE 300 A 1 HETATM 12 N N20 IHE . . . B 2 61.885 12.133 -7.678 1 20.3 ? N20 IHE 300 A 1 HETATM 13 C C21 IHE . . . B 2 62.401 14.343 -7.461 1 18.76 ? C21 IHE 300 A 1 HETATM 14 N N22 IHE . . . B 2 62.304 15.648 -7.042 1 19.66 ? N22 IHE 300 A 1 HETATM 15 C C23 IHE . . . B 2 61.246 15.917 -6.217 1 18.49 ? C23 IHE 300 A 1 HETATM 16 N N24 IHE . . . B 2 60.355 14.962 -5.856 1 16.51 ? N24 IHE 300 A 1 HETATM 17 C C25 IHE . . . B 2 60.496 13.696 -6.3 1 21.03 ? C25 IHE 300 A 1 HETATM 18 C C26 IHE . . . B 2 61.545 13.359 -7.108 1 22.02 ? C26 IHE 300 A 1 HETATM 19 N N28 IHE . . . B 2 59.556 12.703 -5.951 1 24 ? N28 IHE 300 A 1 HETATM 20 C C29 IHE . . . B 2 58.359 12.858 -5.17 1 26.1 ? C29 IHE 300 A 1 HETATM 21 C C30 IHE . . . B 2 57.74 11.541 -4.681 1 24.73 ? C30 IHE 300 A 1 HETATM 22 C C31 IHE . . . B 2 56.442 11.776 -3.87 1 27.58 ? C31 IHE 300 A 1 HETATM 23 C C32 IHE . . . B 2 55.407 12.58 -4.701 1 28.42 ? C32 IHE 300 A 1 HETATM 24 C C33 IHE . . . B 2 55.989 13.92 -5.239 1 30.11 ? C33 IHE 300 A 1 HETATM 25 C C34 IHE . . . B 2 57.32 13.697 -5.971 1 26.12 ? C34 IHE 300 A 1 HETATM 26 N N35 IHE . . . B 2 61.938 18.154 -5.935 1 16.17 ? N35 IHE 300 A 1 HETATM 27 C C27 IHE . . . B 2 61.044 17.296 -5.696 1 14.83 ? C27 IHE 300 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 414 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #