data_1UC9
#
_model_server_result.job_id            -oOsf4042agzfodEmtN_Gw 
_model_server_result.datetime_utc      '2024-11-01 03:37:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1uc9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1300}' 
#
_entry.id    1UC9 
#
_exptl.entry_id    1UC9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          123.24 
_cell.angle_gamma         90 
_cell.entry_id            1UC9 
_cell.length_a            126.591 
_cell.length_b            52.145 
_cell.length_c            105.105 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1UC9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                ADP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B ADP doub 1 n n 
PB O2B ADP sing 2 n n 
PB O3B ADP sing 3 n n 
PB O3A ADP sing 4 n n 
O2B HOB2 ADP sing 5 n n 
O3B HOB3 ADP sing 6 n n 
PA O1A ADP doub 7 n n 
PA O2A ADP sing 8 n n 
PA O3A ADP sing 9 n n 
PA O5' ADP sing 10 n n 
O2A HOA2 ADP sing 11 n n 
O5' C5' ADP sing 12 n n 
C5' C4' ADP sing 13 n n 
C5' "H5'1" ADP sing 14 n n 
C5' "H5'2" ADP sing 15 n n 
C4' O4' ADP sing 16 n n 
C4' C3' ADP sing 17 n n 
C4' H4' ADP sing 18 n n 
O4' C1' ADP sing 19 n n 
C3' O3' ADP sing 20 n n 
C3' C2' ADP sing 21 n n 
C3' H3' ADP sing 22 n n 
O3' HO3' ADP sing 23 n n 
C2' O2' ADP sing 24 n n 
C2' C1' ADP sing 25 n n 
C2' H2' ADP sing 26 n n 
O2' HO2' ADP sing 27 n n 
C1' N9 ADP sing 28 n n 
C1' H1' ADP sing 29 n n 
N9 C8 ADP sing 30 n y 
N9 C4 ADP sing 31 n y 
C8 N7 ADP doub 32 n y 
C8 H8 ADP sing 33 n n 
N7 C5 ADP sing 34 n y 
C5 C6 ADP sing 35 n y 
C5 C4 ADP doub 36 n y 
C6 N6 ADP sing 37 n n 
C6 N1 ADP doub 38 n y 
N6 HN61 ADP sing 39 n n 
N6 HN62 ADP sing 40 n n 
N1 C2 ADP sing 41 n y 
C2 N3 ADP doub 42 n y 
C2 H2 ADP sing 43 n n 
N3 C4 ADP sing 44 n y 
#
_atom_sites.entry_id                     1UC9 
_atom_sites.fract_transf_matrix[1][1]    0.007899 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005177 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019177 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011376 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ADP A 1 300 300 ADP ADP . 
D 2 ADP B 1 1300 1300 ADP ADP . 
E 3 HOH A 1 301 1 HOH HOH . 
E 3 HOH A 2 302 2 HOH HOH . 
E 3 HOH A 3 303 3 HOH HOH . 
E 3 HOH A 4 304 4 HOH HOH . 
E 3 HOH A 5 305 5 HOH HOH . 
E 3 HOH A 6 306 6 HOH HOH . 
E 3 HOH A 7 307 7 HOH HOH . 
E 3 HOH A 8 308 8 HOH HOH . 
E 3 HOH A 9 309 9 HOH HOH . 
E 3 HOH A 10 310 10 HOH HOH . 
E 3 HOH A 11 311 11 HOH HOH . 
E 3 HOH A 12 312 12 HOH HOH . 
E 3 HOH A 13 313 13 HOH HOH . 
E 3 HOH A 14 314 15 HOH HOH . 
E 3 HOH A 15 315 17 HOH HOH . 
E 3 HOH A 16 316 21 HOH HOH . 
E 3 HOH A 17 317 22 HOH HOH . 
E 3 HOH A 18 318 25 HOH HOH . 
E 3 HOH A 19 319 26 HOH HOH . 
E 3 HOH A 20 320 27 HOH HOH . 
E 3 HOH A 21 321 29 HOH HOH . 
E 3 HOH A 22 322 30 HOH HOH . 
E 3 HOH A 23 323 31 HOH HOH . 
E 3 HOH A 24 324 35 HOH HOH . 
E 3 HOH A 25 325 37 HOH HOH . 
E 3 HOH A 26 326 38 HOH HOH . 
E 3 HOH A 27 327 39 HOH HOH . 
E 3 HOH A 28 328 42 HOH HOH . 
E 3 HOH A 29 329 43 HOH HOH . 
E 3 HOH A 30 330 44 HOH HOH . 
E 3 HOH A 31 331 45 HOH HOH . 
E 3 HOH A 32 332 47 HOH HOH . 
E 3 HOH A 33 333 48 HOH HOH . 
E 3 HOH A 34 334 52 HOH HOH . 
E 3 HOH A 35 335 57 HOH HOH . 
F 3 HOH B 1 1301 14 HOH HOH . 
F 3 HOH B 2 1302 16 HOH HOH . 
F 3 HOH B 3 1303 18 HOH HOH . 
F 3 HOH B 4 1304 19 HOH HOH . 
F 3 HOH B 5 1305 20 HOH HOH . 
F 3 HOH B 6 1306 23 HOH HOH . 
F 3 HOH B 7 1307 24 HOH HOH . 
F 3 HOH B 8 1308 28 HOH HOH . 
F 3 HOH B 9 1309 32 HOH HOH . 
F 3 HOH B 10 1310 33 HOH HOH . 
F 3 HOH B 11 1311 34 HOH HOH . 
F 3 HOH B 12 1312 36 HOH HOH . 
F 3 HOH B 13 1313 40 HOH HOH . 
F 3 HOH B 14 1314 41 HOH HOH . 
F 3 HOH B 15 1315 46 HOH HOH . 
F 3 HOH B 16 1316 49 HOH HOH . 
F 3 HOH B 17 1317 50 HOH HOH . 
F 3 HOH B 18 1318 51 HOH HOH . 
F 3 HOH B 19 1319 53 HOH HOH . 
F 3 HOH B 20 1320 54 HOH HOH . 
F 3 HOH B 21 1321 55 HOH HOH . 
F 3 HOH B 22 1322 56 HOH HOH . 
F 3 HOH B 23 1323 58 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB ADP . . . D 2 -30.507 -19.511 4.117 1 86.59 ? PB ADP 1300 B 1 
HETATM 2 O O1B ADP . . . D 2 -31.432 -18.74 3.234 1 85.19 ? O1B ADP 1300 B 1 
HETATM 3 O O2B ADP . . . D 2 -30.844 -19.24 5.67 1 86.16 ? O2B ADP 1300 B 1 
HETATM 4 O O3B ADP . . . D 2 -30.585 -20.973 3.816 1 84.49 ? O3B ADP 1300 B 1 
HETATM 5 P PA ADP . . . D 2 -27.749 -19.646 3.265 1 80.02 ? PA ADP 1300 B 1 
HETATM 6 O O1A ADP . . . D 2 -26.603 -18.726 3.364 1 78.17 ? O1A ADP 1300 B 1 
HETATM 7 O O2A ADP . . . D 2 -27.409 -20.911 3.925 1 80.01 ? O2A ADP 1300 B 1 
HETATM 8 O O3A ADP . . . D 2 -29.021 -18.991 3.932 1 82.32 ? O3A ADP 1300 B 1 
HETATM 9 O O5' ADP . . . D 2 -28.116 -19.984 1.743 1 75.79 ? O5' ADP 1300 B 1 
HETATM 10 C C5' ADP . . . D 2 -29.35 -19.733 1.043 1 68.3 ? C5' ADP 1300 B 1 
HETATM 11 C C4' ADP . . . D 2 -29.219 -20.303 -0.419 1 64.16 ? C4' ADP 1300 B 1 
HETATM 12 O O4' ADP . . . D 2 -27.943 -20.965 -0.557 1 62.23 ? O4' ADP 1300 B 1 
HETATM 13 C C3' ADP . . . D 2 -30.257 -21.399 -0.716 1 62.48 ? C3' ADP 1300 B 1 
HETATM 14 O O3' ADP . . . D 2 -30.729 -21.363 -2.081 1 63.19 ? O3' ADP 1300 B 1 
HETATM 15 C C2' ADP . . . D 2 -29.536 -22.691 -0.375 1 60.8 ? C2' ADP 1300 B 1 
HETATM 16 O O2' ADP . . . D 2 -30.181 -23.868 -0.876 1 62.79 ? O2' ADP 1300 B 1 
HETATM 17 C C1' ADP . . . D 2 -28.146 -22.37 -0.903 1 58.98 ? C1' ADP 1300 B 1 
HETATM 18 N N9 ADP . . . D 2 -27.024 -23.163 -0.264 1 56.5 ? N9 ADP 1300 B 1 
HETATM 19 C C8 ADP . . . D 2 -26.464 -22.897 0.945 1 54.5 ? C8 ADP 1300 B 1 
HETATM 20 N N7 ADP . . . D 2 -25.508 -23.773 1.201 1 52.74 ? N7 ADP 1300 B 1 
HETATM 21 C C5 ADP . . . D 2 -25.422 -24.605 0.198 1 53.92 ? C5 ADP 1300 B 1 
HETATM 22 C C6 ADP . . . D 2 -24.623 -25.72 -0.121 1 53.68 ? C6 ADP 1300 B 1 
HETATM 23 N N6 ADP . . . D 2 -23.678 -26.133 0.727 1 52.29 ? N6 ADP 1300 B 1 
HETATM 24 N N1 ADP . . . D 2 -24.812 -26.397 -1.322 1 54.17 ? N1 ADP 1300 B 1 
HETATM 25 C C2 ADP . . . D 2 -25.763 -26.016 -2.227 1 54.32 ? C2 ADP 1300 B 1 
HETATM 26 N N3 ADP . . . D 2 -26.541 -24.935 -1.931 1 53.62 ? N3 ADP 1300 B 1 
HETATM 27 C C4 ADP . . . D 2 -26.41 -24.218 -0.762 1 55.09 ? C4 ADP 1300 B 1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#