data_1UE8 # _model_server_result.job_id 1wjHBzB6TE5YLoGoKzVqfw _model_server_result.datetime_utc '2024-11-05 00:29:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ue8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":410}' # _entry.id 1UE8 # _exptl.entry_id 1UE8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1UE8 _cell.length_a 53.554 _cell.length_b 55.13 _cell.length_c 130.818 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 317 A CYS 317 1_555 C FE HEM . A HEM 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc2 C FE HEM . A HEM 410 1_555 D O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 129 n n CHA C4D HEM doub 130 n n CHA HHA HEM sing 131 n n CHB C4A HEM sing 132 n n CHB C1B HEM doub 133 n n CHB HHB HEM sing 134 n n CHC C4B HEM sing 135 n n CHC C1C HEM doub 136 n n CHC HHC HEM sing 137 n n CHD C4C HEM doub 138 n n CHD C1D HEM sing 139 n n CHD HHD HEM sing 140 n n C1A C2A HEM doub 141 n y C1A NA HEM sing 142 n y C2A C3A HEM sing 143 n y C2A CAA HEM sing 144 n n C3A C4A HEM doub 145 n y C3A CMA HEM sing 146 n n C4A NA HEM sing 147 n y CMA HMA HEM sing 148 n n CMA HMAA HEM sing 149 n n CMA HMAB HEM sing 150 n n CAA CBA HEM sing 151 n n CAA HAA HEM sing 152 n n CAA HAAA HEM sing 153 n n CBA CGA HEM sing 154 n n CBA HBA HEM sing 155 n n CBA HBAA HEM sing 156 n n CGA O1A HEM doub 157 n n CGA O2A HEM sing 158 n n C1B C2B HEM sing 159 n n C1B NB HEM sing 160 n n C2B C3B HEM doub 161 n n C2B CMB HEM sing 162 n n C3B C4B HEM sing 163 n n C3B CAB HEM sing 164 n n C4B NB HEM doub 165 n n CMB HMB HEM sing 166 n n CMB HMBA HEM sing 167 n n CMB HMBB HEM sing 168 n n CAB CBB HEM doub 169 n n CAB HAB HEM sing 170 n n CBB HBB HEM sing 171 n n CBB HBBA HEM sing 172 n n C1C C2C HEM sing 173 n y C1C NC HEM sing 174 n y C2C C3C HEM doub 175 n y C2C CMC HEM sing 176 n n C3C C4C HEM sing 177 n y C3C CAC HEM sing 178 n n C4C NC HEM sing 179 n y CMC HMC HEM sing 180 n n CMC HMCA HEM sing 181 n n CMC HMCB HEM sing 182 n n CAC CBC HEM doub 183 n n CAC HAC HEM sing 184 n n CBC HBC HEM sing 185 n n CBC HBCA HEM sing 186 n n C1D C2D HEM sing 187 n n C1D ND HEM doub 188 n n C2D C3D HEM doub 189 n n C2D CMD HEM sing 190 n n C3D C4D HEM sing 191 n n C3D CAD HEM sing 192 n n C4D ND HEM sing 193 n n CMD HMD HEM sing 194 n n CMD HMDA HEM sing 195 n n CMD HMDB HEM sing 196 n n CAD CBD HEM sing 197 n n CAD HAD HEM sing 198 n n CAD HADA HEM sing 199 n n CBD CGD HEM sing 200 n n CBD HBD HEM sing 201 n n CBD HBDA HEM sing 202 n n CGD O1D HEM doub 203 n n CGD O2D HEM sing 204 n n O2A H2A HEM sing 205 n n O2D H2D HEM sing 206 n n FE NA HEM sing 207 n n FE NB HEM sing 208 n n FE NC HEM sing 209 n n FE ND HEM sing 210 n n # _atom_sites.entry_id 1UE8 _atom_sites.fract_transf_matrix[1][1] 0.018673 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007644 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 413 413 CL CL . C 3 HEM A 1 410 410 HEM HEM . D 4 HOH A 1 414 411 HOH HOH . D 4 HOH A 2 415 412 HOH HOH . D 4 HOH A 3 416 1 HOH HOH . D 4 HOH A 4 417 2 HOH HOH . D 4 HOH A 5 418 3 HOH HOH . D 4 HOH A 6 419 4 HOH HOH . D 4 HOH A 7 420 5 HOH HOH . D 4 HOH A 8 421 6 HOH HOH . D 4 HOH A 9 422 7 HOH HOH . D 4 HOH A 10 423 8 HOH HOH . D 4 HOH A 11 424 9 HOH HOH . D 4 HOH A 12 425 10 HOH HOH . D 4 HOH A 13 426 11 HOH HOH . D 4 HOH A 14 427 12 HOH HOH . D 4 HOH A 15 428 13 HOH HOH . D 4 HOH A 16 429 14 HOH HOH . D 4 HOH A 17 430 15 HOH HOH . D 4 HOH A 18 431 16 HOH HOH . D 4 HOH A 19 432 17 HOH HOH . D 4 HOH A 20 433 18 HOH HOH . D 4 HOH A 21 434 19 HOH HOH . D 4 HOH A 22 435 20 HOH HOH . D 4 HOH A 23 436 21 HOH HOH . D 4 HOH A 24 437 22 HOH HOH . D 4 HOH A 25 438 23 HOH HOH . D 4 HOH A 26 439 24 HOH HOH . D 4 HOH A 27 440 25 HOH HOH . D 4 HOH A 28 441 26 HOH HOH . D 4 HOH A 29 442 27 HOH HOH . D 4 HOH A 30 443 28 HOH HOH . D 4 HOH A 31 444 29 HOH HOH . D 4 HOH A 32 445 30 HOH HOH . D 4 HOH A 33 446 31 HOH HOH . D 4 HOH A 34 447 32 HOH HOH . D 4 HOH A 35 448 33 HOH HOH . D 4 HOH A 36 449 34 HOH HOH . D 4 HOH A 37 450 35 HOH HOH . D 4 HOH A 38 451 36 HOH HOH . D 4 HOH A 39 452 37 HOH HOH . D 4 HOH A 40 453 38 HOH HOH . D 4 HOH A 41 454 39 HOH HOH . D 4 HOH A 42 455 40 HOH HOH . D 4 HOH A 43 456 41 HOH HOH . D 4 HOH A 44 457 42 HOH HOH . D 4 HOH A 45 458 43 HOH HOH . D 4 HOH A 46 459 44 HOH HOH . D 4 HOH A 47 460 45 HOH HOH . D 4 HOH A 48 461 46 HOH HOH . D 4 HOH A 49 462 47 HOH HOH . D 4 HOH A 50 463 48 HOH HOH . D 4 HOH A 51 464 49 HOH HOH . D 4 HOH A 52 465 50 HOH HOH . D 4 HOH A 53 466 51 HOH HOH . D 4 HOH A 54 467 52 HOH HOH . D 4 HOH A 55 468 53 HOH HOH . D 4 HOH A 56 469 54 HOH HOH . D 4 HOH A 57 470 55 HOH HOH . D 4 HOH A 58 471 56 HOH HOH . D 4 HOH A 59 472 57 HOH HOH . D 4 HOH A 60 473 58 HOH HOH . D 4 HOH A 61 474 59 HOH HOH . D 4 HOH A 62 475 60 HOH HOH . D 4 HOH A 63 476 61 HOH HOH . D 4 HOH A 64 477 62 HOH HOH . D 4 HOH A 65 478 63 HOH HOH . D 4 HOH A 66 479 64 HOH HOH . D 4 HOH A 67 480 65 HOH HOH . D 4 HOH A 68 481 66 HOH HOH . D 4 HOH A 69 482 67 HOH HOH . D 4 HOH A 70 483 68 HOH HOH . D 4 HOH A 71 484 69 HOH HOH . D 4 HOH A 72 485 70 HOH HOH . D 4 HOH A 73 486 71 HOH HOH . D 4 HOH A 74 487 72 HOH HOH . D 4 HOH A 75 488 73 HOH HOH . D 4 HOH A 76 489 74 HOH HOH . D 4 HOH A 77 490 75 HOH HOH . D 4 HOH A 78 491 76 HOH HOH . D 4 HOH A 79 492 77 HOH HOH . D 4 HOH A 80 493 78 HOH HOH . D 4 HOH A 81 494 79 HOH HOH . D 4 HOH A 82 495 80 HOH HOH . D 4 HOH A 83 496 81 HOH HOH . D 4 HOH A 84 497 82 HOH HOH . D 4 HOH A 85 498 83 HOH HOH . D 4 HOH A 86 499 84 HOH HOH . D 4 HOH A 87 500 85 HOH HOH . D 4 HOH A 88 501 86 HOH HOH . D 4 HOH A 89 502 87 HOH HOH . D 4 HOH A 90 503 88 HOH HOH . D 4 HOH A 91 504 89 HOH HOH . D 4 HOH A 92 505 90 HOH HOH . D 4 HOH A 93 506 91 HOH HOH . D 4 HOH A 94 507 92 HOH HOH . D 4 HOH A 95 508 93 HOH HOH . D 4 HOH A 96 509 94 HOH HOH . D 4 HOH A 97 510 95 HOH HOH . D 4 HOH A 98 511 96 HOH HOH . D 4 HOH A 99 512 97 HOH HOH . D 4 HOH A 100 513 98 HOH HOH . D 4 HOH A 101 514 99 HOH HOH . D 4 HOH A 102 515 100 HOH HOH . D 4 HOH A 103 516 101 HOH HOH . D 4 HOH A 104 517 102 HOH HOH . D 4 HOH A 105 518 103 HOH HOH . D 4 HOH A 106 519 104 HOH HOH . D 4 HOH A 107 520 105 HOH HOH . D 4 HOH A 108 521 106 HOH HOH . D 4 HOH A 109 522 107 HOH HOH . D 4 HOH A 110 523 108 HOH HOH . D 4 HOH A 111 524 109 HOH HOH . D 4 HOH A 112 525 110 HOH HOH . D 4 HOH A 113 526 111 HOH HOH . D 4 HOH A 114 527 112 HOH HOH . D 4 HOH A 115 528 113 HOH HOH . D 4 HOH A 116 529 114 HOH HOH . D 4 HOH A 117 530 115 HOH HOH . D 4 HOH A 118 531 116 HOH HOH . D 4 HOH A 119 532 117 HOH HOH . D 4 HOH A 120 533 118 HOH HOH . D 4 HOH A 121 534 119 HOH HOH . D 4 HOH A 122 535 120 HOH HOH . D 4 HOH A 123 536 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . C 3 -17.283 12.189 81.232 1 15.52 ? CHA HEM 410 A 1 HETATM 2 C CHB HEM . . . C 3 -20.6 9.87 78.567 1 16.08 ? CHB HEM 410 A 1 HETATM 3 C CHC HEM . . . C 3 -20.2 5.885 81.184 1 17.58 ? CHC HEM 410 A 1 HETATM 4 C CHD HEM . . . C 3 -16.882 8.117 83.919 1 15.44 ? CHD HEM 410 A 1 HETATM 5 C C1A HEM . . . C 3 -18.192 12.044 80.236 1 14.73 ? C1A HEM 410 A 1 HETATM 6 C C2A HEM . . . C 3 -18.687 12.853 79.212 1 15.24 ? C2A HEM 410 A 1 HETATM 7 C C3A HEM . . . C 3 -19.541 12.081 78.619 1 16.31 ? C3A HEM 410 A 1 HETATM 8 C C4A HEM . . . C 3 -19.774 10.902 78.99 1 16.53 ? C4A HEM 410 A 1 HETATM 9 C CMA HEM . . . C 3 -20.291 12.625 77.433 1 16.24 ? CMA HEM 410 A 1 HETATM 10 C CAA HEM . . . C 3 -18.376 14.282 78.795 1 16.8 ? CAA HEM 410 A 1 HETATM 11 C CBA HEM . . . C 3 -17.503 14.942 79.824 1 16.87 ? CBA HEM 410 A 1 HETATM 12 C CGA HEM . . . C 3 -17.129 16.37 79.371 1 15.72 ? CGA HEM 410 A 1 HETATM 13 O O1A HEM . . . C 3 -16.418 16.455 78.341 1 15.65 ? O1A HEM 410 A 1 HETATM 14 O O2A HEM . . . C 3 -17.942 17.286 79.626 1 10.56 ? O2A HEM 410 A 1 HETATM 15 C C1B HEM . . . C 3 -20.854 8.586 78.961 1 16.29 ? C1B HEM 410 A 1 HETATM 16 C C2B HEM . . . C 3 -21.601 7.643 78.577 1 16.44 ? C2B HEM 410 A 1 HETATM 17 C C3B HEM . . . C 3 -21.633 6.536 79.124 1 15.94 ? C3B HEM 410 A 1 HETATM 18 C C4B HEM . . . C 3 -20.698 6.696 80.157 1 16.31 ? C4B HEM 410 A 1 HETATM 19 C CMB HEM . . . C 3 -22.492 7.877 77.387 1 17.04 ? CMB HEM 410 A 1 HETATM 20 C CAB HEM . . . C 3 -22.396 5.44 78.79 1 16.96 ? CAB HEM 410 A 1 HETATM 21 C CBB HEM . . . C 3 -22.297 4.281 79.507 1 20.19 ? CBB HEM 410 A 1 HETATM 22 C C1C HEM . . . C 3 -19.254 6.054 82.219 1 18.09 ? C1C HEM 410 A 1 HETATM 23 C C2C HEM . . . C 3 -18.786 5.35 83.152 1 18.19 ? C2C HEM 410 A 1 HETATM 24 C C3C HEM . . . C 3 -17.901 5.782 83.968 1 17.92 ? C3C HEM 410 A 1 HETATM 25 C C4C HEM . . . C 3 -17.697 7.082 83.515 1 17.29 ? C4C HEM 410 A 1 HETATM 26 C CMC HEM . . . C 3 -19.295 3.938 83.296 1 18.97 ? CMC HEM 410 A 1 HETATM 27 C CAC HEM . . . C 3 -17.251 5.174 85.056 1 19.62 ? CAC HEM 410 A 1 HETATM 28 C CBC HEM . . . C 3 -17.495 3.872 85.454 1 23.16 ? CBC HEM 410 A 1 HETATM 29 C C1D HEM . . . C 3 -16.623 9.415 83.521 1 14.88 ? C1D HEM 410 A 1 HETATM 30 C C2D HEM . . . C 3 -15.781 10.401 83.979 1 14.65 ? C2D HEM 410 A 1 HETATM 31 C C3D HEM . . . C 3 -15.999 11.403 83.17 1 15.55 ? C3D HEM 410 A 1 HETATM 32 C C4D HEM . . . C 3 -16.829 11.341 82.231 1 16.28 ? C4D HEM 410 A 1 HETATM 33 C CMD HEM . . . C 3 -14.829 10.334 85.138 1 14.39 ? CMD HEM 410 A 1 HETATM 34 C CAD HEM . . . C 3 -15.23 12.681 83.374 1 14.78 ? CAD HEM 410 A 1 HETATM 35 C CBD HEM . . . C 3 -13.925 12.568 82.57 1 13.36 ? CBD HEM 410 A 1 HETATM 36 C CGD HEM . . . C 3 -12.92 13.64 82.93 1 13.46 ? CGD HEM 410 A 1 HETATM 37 O O1D HEM . . . C 3 -13.383 14.781 83.075 1 14.89 ? O1D HEM 410 A 1 HETATM 38 O O2D HEM . . . C 3 -11.744 13.48 82.541 1 9.7 ? O2D HEM 410 A 1 HETATM 39 N NA HEM . . . C 3 -18.908 10.666 80.144 1 15.6 ? NA HEM 410 A 1 HETATM 40 N NB HEM . . . C 3 -20.142 8.097 80.071 1 16.05 ? NB HEM 410 A 1 HETATM 41 N NC HEM . . . C 3 -18.593 7.331 82.323 1 16.37 ? NC HEM 410 A 1 HETATM 42 N ND HEM . . . C 3 -17.405 9.977 82.295 1 16.61 ? ND HEM 410 A 1 HETATM 43 FE FE HEM . . . C 3 -18.776 8.98 81.22 1 22.6 ? FE HEM 410 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #