data_1UEJ
#
_model_server_result.job_id            3vl_MVIqMDGguU8aGP6w4Q 
_model_server_result.datetime_utc      '2024-11-04 22:41:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1uej 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    1UEJ 
#
_exptl.entry_id    1UEJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              243.217 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1UEJ 
_cell.length_a            138.296 
_cell.length_b            247.631 
_cell.length_c            90.944 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1UEJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        22 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'F 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C9 H13 N3 O5' 
_chem_comp.formula_weight    243.217 
_chem_comp.id                CTN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     CYTIDINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O5' C5' CTN sing 90 n n 
O5' H5' CTN sing 91 n n 
C5' C4' CTN sing 92 n n 
C5' "H5'1" CTN sing 93 n n 
C5' "H5'2" CTN sing 94 n n 
C4' O4' CTN sing 95 n n 
C4' C3' CTN sing 96 n n 
C4' H4' CTN sing 97 n n 
O4' C1' CTN sing 98 n n 
C1' N1 CTN sing 99 n n 
C1' C2' CTN sing 100 n n 
C1' H1' CTN sing 101 n n 
N1 C6 CTN sing 102 n y 
N1 C2 CTN sing 103 n y 
C6 C5 CTN doub 104 n y 
C6 H6 CTN sing 105 n n 
C5 C4 CTN sing 106 n y 
C5 H5 CTN sing 107 n n 
C4 N3 CTN doub 108 n y 
C4 N4 CTN sing 109 n n 
N3 C2 CTN sing 110 n y 
C2 O2 CTN doub 111 n n 
N4 HN41 CTN sing 112 n n 
N4 HN42 CTN sing 113 n n 
C2' O2' CTN sing 114 n n 
C2' C3' CTN sing 115 n n 
C2' H2' CTN sing 116 n n 
O2' H1 CTN sing 117 n n 
C3' O3' CTN sing 118 n n 
C3' H3' CTN sing 119 n n 
O3' H2 CTN sing 120 n n 
#
_atom_sites.entry_id                     1UEJ 
_atom_sites.fract_transf_matrix[1][1]    0.007231 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004038 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010996 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CTN A 1 301 301 CTN C . 
D 3 CIT A 1 302 302 CIT CIT . 
E 2 CTN B 1 1301 1301 CTN C . 
F 3 CIT B 1 1302 1302 CIT CIT . 
G 4 HOH A 1 303 1 HOH HOH . 
G 4 HOH A 2 304 5 HOH HOH . 
G 4 HOH A 3 305 9 HOH HOH . 
G 4 HOH A 4 306 11 HOH HOH . 
G 4 HOH A 5 307 12 HOH HOH . 
G 4 HOH A 6 308 13 HOH HOH . 
G 4 HOH A 7 309 14 HOH HOH . 
G 4 HOH A 8 310 15 HOH HOH . 
G 4 HOH A 9 311 16 HOH HOH . 
G 4 HOH A 10 312 18 HOH HOH . 
G 4 HOH A 11 313 20 HOH HOH . 
G 4 HOH A 12 314 28 HOH HOH . 
G 4 HOH A 13 315 30 HOH HOH . 
G 4 HOH A 14 316 32 HOH HOH . 
G 4 HOH A 15 317 34 HOH HOH . 
G 4 HOH A 16 318 35 HOH HOH . 
G 4 HOH A 17 319 36 HOH HOH . 
G 4 HOH A 18 320 38 HOH HOH . 
G 4 HOH A 19 321 40 HOH HOH . 
G 4 HOH A 20 322 42 HOH HOH . 
G 4 HOH A 21 323 43 HOH HOH . 
G 4 HOH A 22 324 44 HOH HOH . 
G 4 HOH A 23 325 45 HOH HOH . 
G 4 HOH A 24 326 47 HOH HOH . 
G 4 HOH A 25 327 49 HOH HOH . 
G 4 HOH A 26 328 50 HOH HOH . 
G 4 HOH A 27 329 56 HOH HOH . 
G 4 HOH A 28 330 57 HOH HOH . 
G 4 HOH A 29 331 58 HOH HOH . 
G 4 HOH A 30 332 60 HOH HOH . 
G 4 HOH A 31 333 62 HOH HOH . 
G 4 HOH A 32 334 64 HOH HOH . 
G 4 HOH A 33 335 66 HOH HOH . 
G 4 HOH A 34 336 68 HOH HOH . 
G 4 HOH A 35 337 71 HOH HOH . 
G 4 HOH A 36 338 73 HOH HOH . 
G 4 HOH A 37 339 74 HOH HOH . 
G 4 HOH A 38 340 76 HOH HOH . 
G 4 HOH A 39 341 81 HOH HOH . 
G 4 HOH A 40 342 82 HOH HOH . 
G 4 HOH A 41 343 83 HOH HOH . 
H 4 HOH B 1 1303 2 HOH HOH . 
H 4 HOH B 2 1304 3 HOH HOH . 
H 4 HOH B 3 1305 4 HOH HOH . 
H 4 HOH B 4 1306 6 HOH HOH . 
H 4 HOH B 5 1307 7 HOH HOH . 
H 4 HOH B 6 1308 8 HOH HOH . 
H 4 HOH B 7 1309 10 HOH HOH . 
H 4 HOH B 8 1310 17 HOH HOH . 
H 4 HOH B 9 1311 19 HOH HOH . 
H 4 HOH B 10 1312 21 HOH HOH . 
H 4 HOH B 11 1313 22 HOH HOH . 
H 4 HOH B 12 1314 23 HOH HOH . 
H 4 HOH B 13 1315 24 HOH HOH . 
H 4 HOH B 14 1316 25 HOH HOH . 
H 4 HOH B 15 1317 26 HOH HOH . 
H 4 HOH B 16 1318 27 HOH HOH . 
H 4 HOH B 17 1319 29 HOH HOH . 
H 4 HOH B 18 1320 31 HOH HOH . 
H 4 HOH B 19 1321 33 HOH HOH . 
H 4 HOH B 20 1322 37 HOH HOH . 
H 4 HOH B 21 1323 39 HOH HOH . 
H 4 HOH B 22 1324 41 HOH HOH . 
H 4 HOH B 23 1325 46 HOH HOH . 
H 4 HOH B 24 1326 48 HOH HOH . 
H 4 HOH B 25 1327 51 HOH HOH . 
H 4 HOH B 26 1328 52 HOH HOH . 
H 4 HOH B 27 1329 53 HOH HOH . 
H 4 HOH B 28 1330 54 HOH HOH . 
H 4 HOH B 29 1331 55 HOH HOH . 
H 4 HOH B 30 1332 59 HOH HOH . 
H 4 HOH B 31 1333 61 HOH HOH . 
H 4 HOH B 32 1334 63 HOH HOH . 
H 4 HOH B 33 1335 65 HOH HOH . 
H 4 HOH B 34 1336 67 HOH HOH . 
H 4 HOH B 35 1337 69 HOH HOH . 
H 4 HOH B 36 1338 70 HOH HOH . 
H 4 HOH B 37 1339 72 HOH HOH . 
H 4 HOH B 38 1340 75 HOH HOH . 
H 4 HOH B 39 1341 77 HOH HOH . 
H 4 HOH B 40 1342 78 HOH HOH . 
H 4 HOH B 41 1343 79 HOH HOH . 
H 4 HOH B 42 1344 80 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O5' CTN . . . C 2 12.149 38.72 31.959 1 43.33 ? O5' CTN 301 A 1 
HETATM 2 C C5' CTN . . . C 2 12.366 37.364 31.725 1 45.35 ? C5' CTN 301 A 1 
HETATM 3 C C4' CTN . . . C 2 12.437 36.598 32.995 1 46.38 ? C4' CTN 301 A 1 
HETATM 4 O O4' CTN . . . C 2 11.445 36.889 33.988 1 47.24 ? O4' CTN 301 A 1 
HETATM 5 C C1' CTN . . . C 2 11.2 35.727 34.689 1 45.16 ? C1' CTN 301 A 1 
HETATM 6 N N1 CTN . . . C 2 9.923 35.882 35.422 1 43.78 ? N1 CTN 301 A 1 
HETATM 7 C C6 CTN . . . C 2 8.763 36.305 34.768 1 43.11 ? C6 CTN 301 A 1 
HETATM 8 C C5 CTN . . . C 2 7.53 36.474 35.393 1 42.69 ? C5 CTN 301 A 1 
HETATM 9 C C4 CTN . . . C 2 7.512 36.187 36.774 1 44.22 ? C4 CTN 301 A 1 
HETATM 10 N N3 CTN . . . C 2 8.661 35.764 37.455 1 45.85 ? N3 CTN 301 A 1 
HETATM 11 C C2 CTN . . . C 2 9.831 35.62 36.786 1 44.73 ? C2 CTN 301 A 1 
HETATM 12 O O2 CTN . . . C 2 10.808 35.236 37.474 1 45.37 ? O2 CTN 301 A 1 
HETATM 13 N N4 CTN . . . C 2 6.39 36.309 37.484 1 43.46 ? N4 CTN 301 A 1 
HETATM 14 C C2' CTN . . . C 2 11.171 34.628 33.638 1 45.49 ? C2' CTN 301 A 1 
HETATM 15 O O2' CTN . . . C 2 11.6 33.382 34.182 1 43.97 ? O2' CTN 301 A 1 
HETATM 16 C C3' CTN . . . C 2 12.044 35.196 32.529 1 46.79 ? C3' CTN 301 A 1 
HETATM 17 O O3' CTN . . . C 2 13.279 34.538 32.364 1 45.7 ? O3' CTN 301 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           17 
#