data_1UGB # _model_server_result.job_id X935rXhOJacYUyIusFAASg _model_server_result.datetime_utc '2024-11-22 05:28:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ugb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 1UGB # _exptl.entry_id 1UGB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 42.02 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AZIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.6 _cell.angle_gamma 90 _cell.entry_id 1UGB _cell.length_a 42.7 _cell.length_b 41.7 _cell.length_c 73 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UGB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 92 A HIS 94 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc2 A NE2 HIS 94 A HIS 96 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc3 A ND1 HIS 117 A HIS 119 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc4 B ZN ZN . A ZN 262 1_555 C N2 AZI . A AZI 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc5 B ZN ZN . A ZN 262 1_555 C N3 AZI . A AZI 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? # _chem_comp.formula 'N3 -1' _chem_comp.formula_weight 42.02 _chem_comp.id AZI _chem_comp.mon_nstd_flag . _chem_comp.name 'AZIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N2 AZI doub 70 n n N2 N3 AZI doub 71 n n # _atom_sites.entry_id 1UGB _atom_sites.fract_transf_matrix[1][1] 0.023419 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0061 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014156 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 262 262 ZN ZN . C 3 AZI A 1 500 500 AZI AZI . D 4 HOH A 1 264 264 HOH HOH . D 4 HOH A 2 265 265 HOH HOH . D 4 HOH A 3 266 266 HOH HOH . D 4 HOH A 4 267 267 HOH HOH . D 4 HOH A 5 269 269 HOH HOH . D 4 HOH A 6 270 270 HOH HOH . D 4 HOH A 7 271 271 HOH HOH . D 4 HOH A 8 274 274 HOH HOH . D 4 HOH A 9 275 275 HOH HOH . D 4 HOH A 10 276 276 HOH HOH . D 4 HOH A 11 277 277 HOH HOH . D 4 HOH A 12 278 278 HOH HOH . D 4 HOH A 13 279 279 HOH HOH . D 4 HOH A 14 281 281 HOH HOH . D 4 HOH A 15 283 283 HOH HOH . D 4 HOH A 16 284 284 HOH HOH . D 4 HOH A 17 285 285 HOH HOH . D 4 HOH A 18 287 287 HOH HOH . D 4 HOH A 19 288 288 HOH HOH . D 4 HOH A 20 290 290 HOH HOH . D 4 HOH A 21 291 291 HOH HOH . D 4 HOH A 22 293 293 HOH HOH . D 4 HOH A 23 294 294 HOH HOH . D 4 HOH A 24 295 295 HOH HOH . D 4 HOH A 25 297 297 HOH HOH . D 4 HOH A 26 298 298 HOH HOH . D 4 HOH A 27 299 299 HOH HOH . D 4 HOH A 28 301 301 HOH HOH . D 4 HOH A 29 302 302 HOH HOH . D 4 HOH A 30 304 304 HOH HOH . D 4 HOH A 31 305 305 HOH HOH . D 4 HOH A 32 306 306 HOH HOH . D 4 HOH A 33 307 307 HOH HOH . D 4 HOH A 34 308 308 HOH HOH . D 4 HOH A 35 310 310 HOH HOH . D 4 HOH A 36 311 311 HOH HOH . D 4 HOH A 37 313 313 HOH HOH . D 4 HOH A 38 317 317 HOH HOH . D 4 HOH A 39 320 320 HOH HOH . D 4 HOH A 40 321 321 HOH HOH . D 4 HOH A 41 322 322 HOH HOH . D 4 HOH A 42 323 323 HOH HOH . D 4 HOH A 43 324 324 HOH HOH . D 4 HOH A 44 325 325 HOH HOH . D 4 HOH A 45 326 326 HOH HOH . D 4 HOH A 46 327 327 HOH HOH . D 4 HOH A 47 328 328 HOH HOH . D 4 HOH A 48 330 330 HOH HOH . D 4 HOH A 49 331 331 HOH HOH . D 4 HOH A 50 332 332 HOH HOH . D 4 HOH A 51 333 333 HOH HOH . D 4 HOH A 52 334 334 HOH HOH . D 4 HOH A 53 336 336 HOH HOH . D 4 HOH A 54 337 337 HOH HOH . D 4 HOH A 55 340 340 HOH HOH . D 4 HOH A 56 341 341 HOH HOH . D 4 HOH A 57 343 343 HOH HOH . D 4 HOH A 58 344 344 HOH HOH . D 4 HOH A 59 348 348 HOH HOH . D 4 HOH A 60 353 353 HOH HOH . D 4 HOH A 61 354 354 HOH HOH . D 4 HOH A 62 355 355 HOH HOH . D 4 HOH A 63 356 356 HOH HOH . D 4 HOH A 64 357 357 HOH HOH . D 4 HOH A 65 358 358 HOH HOH . D 4 HOH A 66 361 361 HOH HOH . D 4 HOH A 67 362 362 HOH HOH . D 4 HOH A 68 363 363 HOH HOH . D 4 HOH A 69 364 364 HOH HOH . D 4 HOH A 70 365 365 HOH HOH . D 4 HOH A 71 366 366 HOH HOH . D 4 HOH A 72 367 367 HOH HOH . D 4 HOH A 73 368 368 HOH HOH . D 4 HOH A 74 369 369 HOH HOH . D 4 HOH A 75 371 371 HOH HOH . D 4 HOH A 76 375 375 HOH HOH . D 4 HOH A 77 376 376 HOH HOH . D 4 HOH A 78 384 384 HOH HOH . D 4 HOH A 79 387 387 HOH HOH . D 4 HOH A 80 390 390 HOH HOH . D 4 HOH A 81 397 397 HOH HOH . D 4 HOH A 82 400 400 HOH HOH . D 4 HOH A 83 401 401 HOH HOH . D 4 HOH A 84 402 402 HOH HOH . D 4 HOH A 85 403 403 HOH HOH . D 4 HOH A 86 404 404 HOH HOH . D 4 HOH A 87 406 406 HOH HOH . D 4 HOH A 88 408 408 HOH HOH . D 4 HOH A 89 409 409 HOH HOH . D 4 HOH A 90 414 414 HOH HOH . D 4 HOH A 91 415 415 HOH HOH . D 4 HOH A 92 416 416 HOH HOH . D 4 HOH A 93 417 417 HOH HOH . D 4 HOH A 94 418 418 HOH HOH . D 4 HOH A 95 420 420 HOH HOH . D 4 HOH A 96 422 422 HOH HOH . D 4 HOH A 97 423 423 HOH HOH . D 4 HOH A 98 424 424 HOH HOH . D 4 HOH A 99 425 425 HOH HOH . D 4 HOH A 100 427 427 HOH HOH . D 4 HOH A 101 428 428 HOH HOH . D 4 HOH A 102 430 430 HOH HOH . D 4 HOH A 103 432 432 HOH HOH . D 4 HOH A 104 434 434 HOH HOH . D 4 HOH A 105 436 436 HOH HOH . D 4 HOH A 106 437 437 HOH HOH . D 4 HOH A 107 441 441 HOH HOH . D 4 HOH A 108 445 445 HOH HOH . D 4 HOH A 109 446 446 HOH HOH . D 4 HOH A 110 448 448 HOH HOH . D 4 HOH A 111 451 451 HOH HOH . D 4 HOH A 112 455 455 HOH HOH . D 4 HOH A 113 458 458 HOH HOH . D 4 HOH A 114 460 460 HOH HOH . D 4 HOH A 115 468 468 HOH HOH . D 4 HOH A 116 474 474 HOH HOH . D 4 HOH A 117 480 480 HOH HOH . D 4 HOH A 118 481 481 HOH HOH . D 4 HOH A 119 483 483 HOH HOH . D 4 HOH A 120 484 484 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AZI . . . C 3 -6.372 0.783 17.608 1 26.74 ? N1 AZI 500 A 1 HETATM 2 N N2 AZI . . . C 3 -5.752 0.048 16.883 1 19 ? N2 AZI 500 A 1 HETATM 3 N N3 AZI . . . C 3 -5.13 -0.677 16.166 1 14.17 ? N3 AZI 500 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 3 #