data_1UGS # _model_server_result.job_id gd97AoVmD1uhQVt7o6-dEA _model_server_result.datetime_utc '2024-11-23 21:01:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ugs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 1UGS # _exptl.entry_id 1UGS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1UGS _cell.length_a 65.517 _cell.length_b 65.517 _cell.length_c 184.874 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UGS _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 107 A CYS 108 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc2 A SG CYS 110 A CYS 111 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc3 A N SER 111 A SER 112 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc4 A N CYS 112 A CYS 113 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc5 A SG CYS 112 A CYS 113 1_555 C CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1UGS _atom_sites.fract_transf_matrix[1][1] 0.015263 _atom_sites.fract_transf_matrix[1][2] 0.008812 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017624 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005409 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CO A 1 301 301 CO CO . D 4 HOH A 1 302 5 HOH HOH . D 4 HOH A 2 303 6 HOH HOH . D 4 HOH A 3 304 8 HOH HOH . D 4 HOH A 4 305 10 HOH HOH . D 4 HOH A 5 306 11 HOH HOH . D 4 HOH A 6 307 13 HOH HOH . D 4 HOH A 7 308 20 HOH HOH . D 4 HOH A 8 309 25 HOH HOH . D 4 HOH A 9 310 32 HOH HOH . D 4 HOH A 10 311 34 HOH HOH . D 4 HOH A 11 312 38 HOH HOH . D 4 HOH A 12 313 40 HOH HOH . D 4 HOH A 13 314 43 HOH HOH . D 4 HOH A 14 315 44 HOH HOH . D 4 HOH A 15 316 48 HOH HOH . D 4 HOH A 16 317 50 HOH HOH . D 4 HOH A 17 318 52 HOH HOH . D 4 HOH A 18 319 54 HOH HOH . D 4 HOH A 19 320 55 HOH HOH . D 4 HOH A 20 321 58 HOH HOH . D 4 HOH A 21 322 59 HOH HOH . D 4 HOH A 22 323 61 HOH HOH . D 4 HOH A 23 324 64 HOH HOH . D 4 HOH A 24 325 68 HOH HOH . D 4 HOH A 25 326 70 HOH HOH . D 4 HOH A 26 327 71 HOH HOH . D 4 HOH A 27 328 74 HOH HOH . D 4 HOH A 28 329 76 HOH HOH . D 4 HOH A 29 330 77 HOH HOH . D 4 HOH A 30 331 78 HOH HOH . D 4 HOH A 31 332 87 HOH HOH . D 4 HOH A 32 333 89 HOH HOH . D 4 HOH A 33 334 90 HOH HOH . D 4 HOH A 34 335 99 HOH HOH . D 4 HOH A 35 336 101 HOH HOH . D 4 HOH A 36 337 102 HOH HOH . D 4 HOH A 37 338 106 HOH HOH . D 4 HOH A 38 339 107 HOH HOH . D 4 HOH A 39 340 108 HOH HOH . D 4 HOH A 40 341 109 HOH HOH . D 4 HOH A 41 342 111 HOH HOH . D 4 HOH A 42 343 118 HOH HOH . D 4 HOH A 43 344 119 HOH HOH . D 4 HOH A 44 345 120 HOH HOH . D 4 HOH A 45 346 126 HOH HOH . D 4 HOH A 46 347 129 HOH HOH . D 4 HOH A 47 348 130 HOH HOH . D 4 HOH A 48 349 133 HOH HOH . D 4 HOH A 49 350 135 HOH HOH . D 4 HOH A 50 351 138 HOH HOH . D 4 HOH A 51 352 140 HOH HOH . D 4 HOH A 52 353 141 HOH HOH . D 4 HOH A 53 354 143 HOH HOH . D 4 HOH A 54 355 144 HOH HOH . D 4 HOH A 55 356 145 HOH HOH . D 4 HOH A 56 357 147 HOH HOH . D 4 HOH A 57 358 149 HOH HOH . D 4 HOH A 58 359 155 HOH HOH . D 4 HOH A 59 360 157 HOH HOH . D 4 HOH A 60 361 158 HOH HOH . D 4 HOH A 61 362 160 HOH HOH . D 4 HOH A 62 363 161 HOH HOH . D 4 HOH A 63 364 165 HOH HOH . D 4 HOH A 64 365 167 HOH HOH . D 4 HOH A 65 366 169 HOH HOH . D 4 HOH A 66 367 172 HOH HOH . D 4 HOH A 67 368 173 HOH HOH . D 4 HOH A 68 369 175 HOH HOH . D 4 HOH A 69 370 178 HOH HOH . D 4 HOH A 70 371 179 HOH HOH . D 4 HOH A 71 372 180 HOH HOH . D 4 HOH A 72 373 182 HOH HOH . D 4 HOH A 73 374 184 HOH HOH . D 4 HOH A 74 375 187 HOH HOH . D 4 HOH A 75 376 188 HOH HOH . D 4 HOH A 76 377 191 HOH HOH . D 4 HOH A 77 378 194 HOH HOH . D 4 HOH A 78 379 199 HOH HOH . D 4 HOH A 79 380 200 HOH HOH . D 4 HOH A 80 381 201 HOH HOH . D 4 HOH A 81 382 202 HOH HOH . D 4 HOH A 82 383 204 HOH HOH . D 4 HOH A 83 384 209 HOH HOH . D 4 HOH A 84 385 210 HOH HOH . D 4 HOH A 85 386 211 HOH HOH . D 4 HOH A 86 387 217 HOH HOH . D 4 HOH A 87 388 218 HOH HOH . D 4 HOH A 88 389 225 HOH HOH . D 4 HOH A 89 390 227 HOH HOH . D 4 HOH A 90 391 230 HOH HOH . D 4 HOH A 91 392 233 HOH HOH . D 4 HOH A 92 393 234 HOH HOH . D 4 HOH A 93 394 235 HOH HOH . D 4 HOH A 94 395 238 HOH HOH . D 4 HOH A 95 396 240 HOH HOH . D 4 HOH A 96 397 241 HOH HOH . D 4 HOH A 97 398 244 HOH HOH . D 4 HOH A 98 399 250 HOH HOH . D 4 HOH A 99 400 251 HOH HOH . D 4 HOH A 100 401 252 HOH HOH . D 4 HOH A 101 402 253 HOH HOH . D 4 HOH A 102 403 258 HOH HOH . D 4 HOH A 103 404 259 HOH HOH . D 4 HOH A 104 405 261 HOH HOH . D 4 HOH A 105 406 263 HOH HOH . D 4 HOH A 106 407 265 HOH HOH . D 4 HOH A 107 408 266 HOH HOH . D 4 HOH A 108 409 267 HOH HOH . D 4 HOH A 109 410 268 HOH HOH . D 4 HOH A 110 411 272 HOH HOH . D 4 HOH A 111 412 276 HOH HOH . D 4 HOH A 112 413 277 HOH HOH . D 4 HOH A 113 414 279 HOH HOH . E 4 HOH B 1 229 1 HOH HOH . E 4 HOH B 2 230 2 HOH HOH . E 4 HOH B 3 231 3 HOH HOH . E 4 HOH B 4 232 4 HOH HOH . E 4 HOH B 5 233 7 HOH HOH . E 4 HOH B 6 234 9 HOH HOH . E 4 HOH B 7 235 12 HOH HOH . E 4 HOH B 8 236 14 HOH HOH . E 4 HOH B 9 237 15 HOH HOH . E 4 HOH B 10 238 16 HOH HOH . E 4 HOH B 11 239 17 HOH HOH . E 4 HOH B 12 240 18 HOH HOH . E 4 HOH B 13 241 19 HOH HOH . E 4 HOH B 14 242 21 HOH HOH . E 4 HOH B 15 243 22 HOH HOH . E 4 HOH B 16 244 23 HOH HOH . E 4 HOH B 17 245 24 HOH HOH . E 4 HOH B 18 246 26 HOH HOH . E 4 HOH B 19 247 27 HOH HOH . E 4 HOH B 20 248 28 HOH HOH . E 4 HOH B 21 249 29 HOH HOH . E 4 HOH B 22 250 30 HOH HOH . E 4 HOH B 23 251 31 HOH HOH . E 4 HOH B 24 252 33 HOH HOH . E 4 HOH B 25 253 35 HOH HOH . E 4 HOH B 26 254 36 HOH HOH . E 4 HOH B 27 255 37 HOH HOH . E 4 HOH B 28 256 39 HOH HOH . E 4 HOH B 29 257 41 HOH HOH . E 4 HOH B 30 258 42 HOH HOH . E 4 HOH B 31 259 45 HOH HOH . E 4 HOH B 32 260 46 HOH HOH . E 4 HOH B 33 261 47 HOH HOH . E 4 HOH B 34 262 49 HOH HOH . E 4 HOH B 35 263 51 HOH HOH . E 4 HOH B 36 264 53 HOH HOH . E 4 HOH B 37 265 56 HOH HOH . E 4 HOH B 38 266 57 HOH HOH . E 4 HOH B 39 267 60 HOH HOH . E 4 HOH B 40 268 62 HOH HOH . E 4 HOH B 41 269 63 HOH HOH . E 4 HOH B 42 270 65 HOH HOH . E 4 HOH B 43 271 66 HOH HOH . E 4 HOH B 44 272 67 HOH HOH . E 4 HOH B 45 273 69 HOH HOH . E 4 HOH B 46 274 72 HOH HOH . E 4 HOH B 47 275 73 HOH HOH . E 4 HOH B 48 276 75 HOH HOH . E 4 HOH B 49 277 79 HOH HOH . E 4 HOH B 50 278 80 HOH HOH . E 4 HOH B 51 279 81 HOH HOH . E 4 HOH B 52 280 82 HOH HOH . E 4 HOH B 53 281 83 HOH HOH . E 4 HOH B 54 282 84 HOH HOH . E 4 HOH B 55 283 85 HOH HOH . E 4 HOH B 56 284 86 HOH HOH . E 4 HOH B 57 285 88 HOH HOH . E 4 HOH B 58 286 91 HOH HOH . E 4 HOH B 59 287 92 HOH HOH . E 4 HOH B 60 288 93 HOH HOH . E 4 HOH B 61 289 94 HOH HOH . E 4 HOH B 62 290 95 HOH HOH . E 4 HOH B 63 291 96 HOH HOH . E 4 HOH B 64 292 97 HOH HOH . E 4 HOH B 65 293 98 HOH HOH . E 4 HOH B 66 294 100 HOH HOH . E 4 HOH B 67 295 103 HOH HOH . E 4 HOH B 68 296 104 HOH HOH . E 4 HOH B 69 297 105 HOH HOH . E 4 HOH B 70 298 110 HOH HOH . E 4 HOH B 71 299 112 HOH HOH . E 4 HOH B 72 300 113 HOH HOH . E 4 HOH B 73 301 114 HOH HOH . E 4 HOH B 74 302 115 HOH HOH . E 4 HOH B 75 303 116 HOH HOH . E 4 HOH B 76 304 117 HOH HOH . E 4 HOH B 77 305 121 HOH HOH . E 4 HOH B 78 306 122 HOH HOH . E 4 HOH B 79 307 123 HOH HOH . E 4 HOH B 80 308 124 HOH HOH . E 4 HOH B 81 309 125 HOH HOH . E 4 HOH B 82 310 127 HOH HOH . E 4 HOH B 83 311 128 HOH HOH . E 4 HOH B 84 312 131 HOH HOH . E 4 HOH B 85 313 132 HOH HOH . E 4 HOH B 86 314 134 HOH HOH . E 4 HOH B 87 315 136 HOH HOH . E 4 HOH B 88 316 137 HOH HOH . E 4 HOH B 89 317 139 HOH HOH . E 4 HOH B 90 318 142 HOH HOH . E 4 HOH B 91 319 146 HOH HOH . E 4 HOH B 92 320 148 HOH HOH . E 4 HOH B 93 321 150 HOH HOH . E 4 HOH B 94 322 151 HOH HOH . E 4 HOH B 95 323 152 HOH HOH . E 4 HOH B 96 324 153 HOH HOH . E 4 HOH B 97 325 154 HOH HOH . E 4 HOH B 98 326 156 HOH HOH . E 4 HOH B 99 327 159 HOH HOH . E 4 HOH B 100 328 162 HOH HOH . E 4 HOH B 101 329 163 HOH HOH . E 4 HOH B 102 330 164 HOH HOH . E 4 HOH B 103 331 166 HOH HOH . E 4 HOH B 104 332 168 HOH HOH . E 4 HOH B 105 333 170 HOH HOH . E 4 HOH B 106 334 171 HOH HOH . E 4 HOH B 107 335 174 HOH HOH . E 4 HOH B 108 336 176 HOH HOH . E 4 HOH B 109 337 177 HOH HOH . E 4 HOH B 110 338 181 HOH HOH . E 4 HOH B 111 339 183 HOH HOH . E 4 HOH B 112 340 185 HOH HOH . E 4 HOH B 113 341 186 HOH HOH . E 4 HOH B 114 342 189 HOH HOH . E 4 HOH B 115 343 190 HOH HOH . E 4 HOH B 116 344 192 HOH HOH . E 4 HOH B 117 345 193 HOH HOH . E 4 HOH B 118 346 195 HOH HOH . E 4 HOH B 119 347 196 HOH HOH . E 4 HOH B 120 348 197 HOH HOH . E 4 HOH B 121 349 198 HOH HOH . E 4 HOH B 122 350 203 HOH HOH . E 4 HOH B 123 351 205 HOH HOH . E 4 HOH B 124 352 206 HOH HOH . E 4 HOH B 125 353 207 HOH HOH . E 4 HOH B 126 354 208 HOH HOH . E 4 HOH B 127 355 212 HOH HOH . E 4 HOH B 128 356 213 HOH HOH . E 4 HOH B 129 357 214 HOH HOH . E 4 HOH B 130 358 215 HOH HOH . E 4 HOH B 131 359 216 HOH HOH . E 4 HOH B 132 360 219 HOH HOH . E 4 HOH B 133 361 220 HOH HOH . E 4 HOH B 134 362 221 HOH HOH . E 4 HOH B 135 363 222 HOH HOH . E 4 HOH B 136 364 223 HOH HOH . E 4 HOH B 137 365 224 HOH HOH . E 4 HOH B 138 366 226 HOH HOH . E 4 HOH B 139 367 228 HOH HOH . E 4 HOH B 140 368 229 HOH HOH . E 4 HOH B 141 369 231 HOH HOH . E 4 HOH B 142 370 232 HOH HOH . E 4 HOH B 143 371 236 HOH HOH . E 4 HOH B 144 372 237 HOH HOH . E 4 HOH B 145 373 239 HOH HOH . E 4 HOH B 146 374 242 HOH HOH . E 4 HOH B 147 375 243 HOH HOH . E 4 HOH B 148 376 245 HOH HOH . E 4 HOH B 149 377 246 HOH HOH . E 4 HOH B 150 378 247 HOH HOH . E 4 HOH B 151 379 248 HOH HOH . E 4 HOH B 152 380 249 HOH HOH . E 4 HOH B 153 381 254 HOH HOH . E 4 HOH B 154 382 255 HOH HOH . E 4 HOH B 155 383 256 HOH HOH . E 4 HOH B 156 384 257 HOH HOH . E 4 HOH B 157 385 260 HOH HOH . E 4 HOH B 158 386 262 HOH HOH . E 4 HOH B 159 387 264 HOH HOH . E 4 HOH B 160 388 269 HOH HOH . E 4 HOH B 161 389 270 HOH HOH . E 4 HOH B 162 390 271 HOH HOH . E 4 HOH B 163 391 273 HOH HOH . E 4 HOH B 164 392 274 HOH HOH . E 4 HOH B 165 393 275 HOH HOH . E 4 HOH B 166 394 278 HOH HOH . E 4 HOH B 167 395 280 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 10.209 _atom_site.Cartn_y 37.258 _atom_site.Cartn_z 13.718 _atom_site.occupancy 0.29 _atom_site.B_iso_or_equiv 24.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #