data_1UHX # _model_server_result.job_id uaXL19CsP_VnDDcvDGHV6A _model_server_result.datetime_utc '2024-10-10 14:25:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1uhx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":78}' # _entry.id 1UHX # _exptl.entry_id 1UHX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 161.116 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT HEXAMMINE(III)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1UHX _cell.length_a 37.67 _cell.length_b 37.67 _cell.length_c 65.49 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UHX _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 18.835 32.623177 32.745 3 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 37.67 0 0 4 'crystal symmetry operation' 12_555 x,x-y,-z+1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 32.745 5 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 18.835 32.623177 0 6 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 37.67 0 32.745 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DG 1 A DG 1 1_555 A P CBR 2 A CBR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? covale ? covale2 A O3' CBR 2 A CBR 2 1_555 A P DG 3 A DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? metalc ? metalc1 F O HOH . A HOH 9 1_555 B MG MG . A MG 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc2 F O HOH . A HOH 27 1_555 B MG MG . A MG 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc3 F O HOH . A HOH 29 1_555 B MG MG . A MG 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc4 F O HOH . A HOH 47 1_555 B MG MG . A MG 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc5 F O HOH . A HOH 48 1_555 B MG MG . A MG 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc6 F O HOH . A HOH 67 1_555 B MG MG . A MG 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 A DG 1 1_555 A N3 DC 8 A DC 8 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 A DG 1 1_555 A O2 DC 8 A DC 8 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 A DG 1 1_555 A N4 DC 8 A DC 8 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 CBR 2 A CBR 2 1_555 A N1 DG 7 A DG 7 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 CBR 2 A CBR 2 1_555 A O6 DG 7 A DG 7 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 CBR 2 A CBR 2 1_555 A N2 DG 7 A DG 7 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog7 A N2 DG 3 A DG 3 1_555 A N7 DA 6 A DA 6 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog8 A N3 DG 3 A DG 3 1_555 A N6 DA 6 A DA 6 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog9 A N6 DA 6 A DA 6 1_555 A N3 DG 3 A DG 3 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog10 A N7 DA 6 A DA 6 1_555 A N2 DG 3 A DG 3 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N1 DG 7 A DG 7 1_555 A N3 CBR 2 A CBR 2 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N2 DG 7 A DG 7 1_555 A O2 CBR 2 A CBR 2 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O6 DG 7 A DG 7 1_555 A N4 CBR 2 A CBR 2 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DC 8 A DC 8 1_555 A N1 DG 1 A DG 1 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 DC 8 A DC 8 1_555 A O6 DG 1 A DG 1 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 DC 8 A DC 8 1_555 A N2 DG 1 A DG 1 8_665 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Co H18 N6 3' _chem_comp.formula_weight 161.116 _chem_comp.id NCO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT HEXAMMINE(III)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CO N1 NCO sing 150 n n CO N2 NCO sing 151 n n CO N3 NCO sing 152 n n CO N4 NCO sing 153 n n CO N5 NCO sing 154 n n CO N6 NCO sing 155 n n N1 HN11 NCO sing 156 n n N1 HN12 NCO sing 157 n n N1 HN13 NCO sing 158 n n N2 HN21 NCO sing 159 n n N2 HN22 NCO sing 160 n n N2 HN23 NCO sing 161 n n N3 HN31 NCO sing 162 n n N3 HN32 NCO sing 163 n n N3 HN33 NCO sing 164 n n N4 HN41 NCO sing 165 n n N4 HN42 NCO sing 166 n n N4 HN43 NCO sing 167 n n N5 HN51 NCO sing 168 n n N5 HN52 NCO sing 169 n n N5 HN53 NCO sing 170 n n N6 HN61 NCO sing 171 n n N6 HN62 NCO sing 172 n n N6 HN63 NCO sing 173 n n # _atom_sites.entry_id 1UHX _atom_sites.fract_transf_matrix[1][1] 0.026546 _atom_sites.fract_transf_matrix[1][2] 0.015327 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.030653 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 79 79 MG MG . C 3 CL A 1 80 80 CL CL . D 4 NA A 1 81 81 NA NA . E 5 NCO A 1 78 78 NCO NCO . F 6 HOH A 1 9 9 HOH HOH . F 6 HOH A 2 10 10 HOH HOH . F 6 HOH A 3 11 11 HOH HOH . F 6 HOH A 4 12 12 HOH HOH . F 6 HOH A 5 13 13 HOH HOH . F 6 HOH A 6 14 14 HOH HOH . F 6 HOH A 7 15 15 HOH HOH . F 6 HOH A 8 16 16 HOH HOH . F 6 HOH A 9 17 17 HOH HOH . F 6 HOH A 10 18 18 HOH HOH . F 6 HOH A 11 19 19 HOH HOH . F 6 HOH A 12 20 20 HOH HOH . F 6 HOH A 13 21 21 HOH HOH . F 6 HOH A 14 22 22 HOH HOH . F 6 HOH A 15 23 23 HOH HOH . F 6 HOH A 16 24 24 HOH HOH . F 6 HOH A 17 25 25 HOH HOH . F 6 HOH A 18 26 26 HOH HOH . F 6 HOH A 19 27 27 HOH HOH . F 6 HOH A 20 28 28 HOH HOH . F 6 HOH A 21 29 29 HOH HOH . F 6 HOH A 22 30 30 HOH HOH . F 6 HOH A 23 31 31 HOH HOH . F 6 HOH A 24 32 32 HOH HOH . F 6 HOH A 25 33 33 HOH HOH . F 6 HOH A 26 34 34 HOH HOH . F 6 HOH A 27 35 35 HOH HOH . F 6 HOH A 28 36 36 HOH HOH . F 6 HOH A 29 37 37 HOH HOH . F 6 HOH A 30 38 38 HOH HOH . F 6 HOH A 31 39 39 HOH HOH . F 6 HOH A 32 40 40 HOH HOH . F 6 HOH A 33 41 41 HOH HOH . F 6 HOH A 34 42 42 HOH HOH . F 6 HOH A 35 43 43 HOH HOH . F 6 HOH A 36 44 44 HOH HOH . F 6 HOH A 37 45 45 HOH HOH . F 6 HOH A 38 46 46 HOH HOH . F 6 HOH A 39 47 47 HOH HOH . F 6 HOH A 40 48 48 HOH HOH . F 6 HOH A 41 49 49 HOH HOH . F 6 HOH A 42 50 50 HOH HOH . F 6 HOH A 43 51 51 HOH HOH . F 6 HOH A 44 52 52 HOH HOH . F 6 HOH A 45 53 53 HOH HOH . F 6 HOH A 46 54 54 HOH HOH . F 6 HOH A 47 55 55 HOH HOH . F 6 HOH A 48 56 56 HOH HOH . F 6 HOH A 49 57 57 HOH HOH . F 6 HOH A 50 58 58 HOH HOH . F 6 HOH A 51 59 59 HOH HOH . F 6 HOH A 52 60 60 HOH HOH . F 6 HOH A 53 61 61 HOH HOH . F 6 HOH A 54 62 62 HOH HOH . F 6 HOH A 55 63 63 HOH HOH . F 6 HOH A 56 64 64 HOH HOH . F 6 HOH A 57 65 65 HOH HOH . F 6 HOH A 58 66 66 HOH HOH . F 6 HOH A 59 67 67 HOH HOH . F 6 HOH A 60 68 68 HOH HOH . F 6 HOH A 61 69 69 HOH HOH . F 6 HOH A 62 70 70 HOH HOH . F 6 HOH A 63 71 71 HOH HOH . F 6 HOH A 64 72 72 HOH HOH . F 6 HOH A 65 73 73 HOH HOH . F 6 HOH A 66 74 74 HOH HOH . F 6 HOH A 67 75 75 HOH HOH . F 6 HOH A 68 76 76 HOH HOH . F 6 HOH A 69 77 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CO CO NCO . . . E 5 18.835 10.874 6.905 0.33 6.47 ? CO NCO 78 A 1 HETATM 2 N N1 NCO . . . E 5 19.436 12.344 8.04 0.33 9.13 ? N1 NCO 78 A 1 HETATM 3 N N2 NCO . . . E 5 17.847 12.135 5.79 0.33 4.24 ? N2 NCO 78 A 1 HETATM 4 N N3 NCO . . . E 5 17.245 10.665 8.021 0.33 9.46 ? N3 NCO 78 A 1 HETATM 5 N N4 NCO . . . E 5 19.83 9.612 8.015 0.33 9.48 ? N4 NCO 78 A 1 HETATM 6 N N5 NCO . . . E 5 20.426 11.082 5.795 0.33 4.21 ? N5 NCO 78 A 1 HETATM 7 N N6 NCO . . . E 5 18.238 9.403 5.774 0.33 4.32 ? N6 NCO 78 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #