data_1UIO # _model_server_result.job_id 52KIiNK_62WyimkFSGEscw _model_server_result.datetime_utc '2025-04-25 02:00:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1uio # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":353}' # _entry.id 1UIO # _exptl.entry_id 1UIO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.242 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-HYDROXY-7,8-DIHYDRO PURINE NUCLEOSIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.92 _cell.angle_gamma 90 _cell.entry_id 1UIO _cell.length_a 99.14 _cell.length_b 93.94 _cell.length_c 71.98 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UIO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 12 A HIS 15 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc2 A NE2 HIS 14 A HIS 17 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc3 A NE2 HIS 211 A HIS 214 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc4 A OD1 ASP 292 A ASP 295 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc5 C O6 HPR . A HPR 353 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? # _chem_comp.formula 'C10 H14 N4 O5' _chem_comp.formula_weight 270.242 _chem_comp.id HPR _chem_comp.mon_nstd_flag . _chem_comp.name '6-HYDROXY-7,8-DIHYDRO PURINE NUCLEOSIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 HPR doub 152 n y N1 C6 HPR sing 153 n y C2 N3 HPR sing 154 n y C2 H2 HPR sing 155 n n N3 C4 HPR doub 156 n y C4 C5 HPR sing 157 n y C4 N9 HPR sing 158 n n C5 C6 HPR doub 159 n y C5 N7 HPR sing 160 n n C6 O6 HPR sing 161 n n O6 HO6 HPR sing 162 n n N7 C8 HPR sing 163 n n N7 HN7 HPR sing 164 n n C8 N9 HPR sing 165 n n C8 H81 HPR sing 166 n n C8 H82 HPR sing 167 n n N9 C1' HPR sing 168 n n C1' C2' HPR sing 169 n n C1' O4' HPR sing 170 n n C1' H1' HPR sing 171 n n C2' O2' HPR sing 172 n n C2' C3' HPR sing 173 n n C2' H2' HPR sing 174 n n O2' HO2' HPR sing 175 n n C3' O3' HPR sing 176 n n C3' C4' HPR sing 177 n n C3' H3' HPR sing 178 n n O3' HO3' HPR sing 179 n n C4' O4' HPR sing 180 n n C4' C5' HPR sing 181 n n C4' H4' HPR sing 182 n n C5' O5' HPR sing 183 n n C5' "H5'1" HPR sing 184 n n C5' "H5'2" HPR sing 185 n n O5' HO5' HPR sing 186 n n # _atom_sites.entry_id 1UIO _atom_sites.fract_transf_matrix[1][1] 0.010087 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007579 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010645 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 400 400 ZN ZN . C 3 HPR A 1 353 353 HPR HPR . D 4 HOH A 1 401 401 HOH HOH . D 4 HOH A 2 402 402 HOH HOH . D 4 HOH A 3 403 403 HOH HOH . D 4 HOH A 4 404 404 HOH HOH . D 4 HOH A 5 405 405 HOH HOH . D 4 HOH A 6 406 406 HOH HOH . D 4 HOH A 7 407 407 HOH HOH . D 4 HOH A 8 408 408 HOH HOH . D 4 HOH A 9 409 409 HOH HOH . D 4 HOH A 10 410 410 HOH HOH . D 4 HOH A 11 411 411 HOH HOH . D 4 HOH A 12 412 412 HOH HOH . D 4 HOH A 13 413 413 HOH HOH . D 4 HOH A 14 414 414 HOH HOH . D 4 HOH A 15 415 415 HOH HOH . D 4 HOH A 16 416 416 HOH HOH . D 4 HOH A 17 417 417 HOH HOH . D 4 HOH A 18 418 418 HOH HOH . D 4 HOH A 19 419 419 HOH HOH . D 4 HOH A 20 420 420 HOH HOH . D 4 HOH A 21 421 421 HOH HOH . D 4 HOH A 22 422 422 HOH HOH . D 4 HOH A 23 423 423 HOH HOH . D 4 HOH A 24 424 424 HOH HOH . D 4 HOH A 25 425 425 HOH HOH . D 4 HOH A 26 426 426 HOH HOH . D 4 HOH A 27 427 427 HOH HOH . D 4 HOH A 28 428 428 HOH HOH . D 4 HOH A 29 429 429 HOH HOH . D 4 HOH A 30 430 430 HOH HOH . D 4 HOH A 31 431 431 HOH HOH . D 4 HOH A 32 432 432 HOH HOH . D 4 HOH A 33 433 433 HOH HOH . D 4 HOH A 34 434 434 HOH HOH . D 4 HOH A 35 435 435 HOH HOH . D 4 HOH A 36 436 436 HOH HOH . D 4 HOH A 37 437 437 HOH HOH . D 4 HOH A 38 438 438 HOH HOH . D 4 HOH A 39 439 439 HOH HOH . D 4 HOH A 40 440 440 HOH HOH . D 4 HOH A 41 441 441 HOH HOH . D 4 HOH A 42 442 442 HOH HOH . D 4 HOH A 43 443 443 HOH HOH . D 4 HOH A 44 444 444 HOH HOH . D 4 HOH A 45 445 445 HOH HOH . D 4 HOH A 46 446 446 HOH HOH . D 4 HOH A 47 447 447 HOH HOH . D 4 HOH A 48 448 448 HOH HOH . D 4 HOH A 49 449 449 HOH HOH . D 4 HOH A 50 450 450 HOH HOH . D 4 HOH A 51 451 451 HOH HOH . D 4 HOH A 52 452 452 HOH HOH . D 4 HOH A 53 453 453 HOH HOH . D 4 HOH A 54 454 454 HOH HOH . D 4 HOH A 55 455 455 HOH HOH . D 4 HOH A 56 456 456 HOH HOH . D 4 HOH A 57 457 457 HOH HOH . D 4 HOH A 58 458 458 HOH HOH . D 4 HOH A 59 459 459 HOH HOH . D 4 HOH A 60 460 460 HOH HOH . D 4 HOH A 61 461 461 HOH HOH . D 4 HOH A 62 462 462 HOH HOH . D 4 HOH A 63 463 463 HOH HOH . D 4 HOH A 64 464 464 HOH HOH . D 4 HOH A 65 465 465 HOH HOH . D 4 HOH A 66 466 466 HOH HOH . D 4 HOH A 67 467 467 HOH HOH . D 4 HOH A 68 468 468 HOH HOH . D 4 HOH A 69 469 469 HOH HOH . D 4 HOH A 70 470 470 HOH HOH . D 4 HOH A 71 471 471 HOH HOH . D 4 HOH A 72 472 472 HOH HOH . D 4 HOH A 73 473 473 HOH HOH . D 4 HOH A 74 474 474 HOH HOH . D 4 HOH A 75 475 475 HOH HOH . D 4 HOH A 76 476 476 HOH HOH . D 4 HOH A 77 477 477 HOH HOH . D 4 HOH A 78 478 478 HOH HOH . D 4 HOH A 79 479 479 HOH HOH . D 4 HOH A 80 480 480 HOH HOH . D 4 HOH A 81 481 481 HOH HOH . D 4 HOH A 82 482 482 HOH HOH . D 4 HOH A 83 483 483 HOH HOH . D 4 HOH A 84 484 484 HOH HOH . D 4 HOH A 85 485 485 HOH HOH . D 4 HOH A 86 487 487 HOH HOH . D 4 HOH A 87 488 488 HOH HOH . D 4 HOH A 88 489 489 HOH HOH . D 4 HOH A 89 490 490 HOH HOH . D 4 HOH A 90 491 491 HOH HOH . D 4 HOH A 91 492 492 HOH HOH . D 4 HOH A 92 493 493 HOH HOH . D 4 HOH A 93 494 494 HOH HOH . D 4 HOH A 94 495 495 HOH HOH . D 4 HOH A 95 496 496 HOH HOH . D 4 HOH A 96 497 497 HOH HOH . D 4 HOH A 97 498 498 HOH HOH . D 4 HOH A 98 499 499 HOH HOH . D 4 HOH A 99 500 500 HOH HOH . D 4 HOH A 100 501 501 HOH HOH . D 4 HOH A 101 502 502 HOH HOH . D 4 HOH A 102 503 503 HOH HOH . D 4 HOH A 103 504 504 HOH HOH . D 4 HOH A 104 505 505 HOH HOH . D 4 HOH A 105 506 506 HOH HOH . D 4 HOH A 106 507 507 HOH HOH . D 4 HOH A 107 508 508 HOH HOH . D 4 HOH A 108 509 509 HOH HOH . D 4 HOH A 109 510 510 HOH HOH . D 4 HOH A 110 511 511 HOH HOH . D 4 HOH A 111 512 512 HOH HOH . D 4 HOH A 112 513 513 HOH HOH . D 4 HOH A 113 514 514 HOH HOH . D 4 HOH A 114 515 515 HOH HOH . D 4 HOH A 115 516 516 HOH HOH . D 4 HOH A 116 517 517 HOH HOH . D 4 HOH A 117 518 518 HOH HOH . D 4 HOH A 118 519 519 HOH HOH . D 4 HOH A 119 520 520 HOH HOH . D 4 HOH A 120 521 521 HOH HOH . D 4 HOH A 121 522 522 HOH HOH . D 4 HOH A 122 523 523 HOH HOH . D 4 HOH A 123 524 524 HOH HOH . D 4 HOH A 124 525 525 HOH HOH . D 4 HOH A 125 526 526 HOH HOH . D 4 HOH A 126 527 527 HOH HOH . D 4 HOH A 127 528 528 HOH HOH . D 4 HOH A 128 529 529 HOH HOH . D 4 HOH A 129 530 530 HOH HOH . D 4 HOH A 130 531 531 HOH HOH . D 4 HOH A 131 532 532 HOH HOH . D 4 HOH A 132 533 533 HOH HOH . D 4 HOH A 133 534 534 HOH HOH . D 4 HOH A 134 535 535 HOH HOH . D 4 HOH A 135 536 536 HOH HOH . D 4 HOH A 136 537 537 HOH HOH . D 4 HOH A 137 538 538 HOH HOH . D 4 HOH A 138 539 539 HOH HOH . D 4 HOH A 139 540 540 HOH HOH . D 4 HOH A 140 541 541 HOH HOH . D 4 HOH A 141 542 542 HOH HOH . D 4 HOH A 142 543 543 HOH HOH . D 4 HOH A 143 544 544 HOH HOH . D 4 HOH A 144 545 545 HOH HOH . D 4 HOH A 145 546 546 HOH HOH . D 4 HOH A 146 547 547 HOH HOH . D 4 HOH A 147 548 548 HOH HOH . D 4 HOH A 148 549 549 HOH HOH . D 4 HOH A 149 550 550 HOH HOH . D 4 HOH A 150 551 551 HOH HOH . D 4 HOH A 151 552 552 HOH HOH . D 4 HOH A 152 553 553 HOH HOH . D 4 HOH A 153 554 554 HOH HOH . D 4 HOH A 154 555 555 HOH HOH . D 4 HOH A 155 556 556 HOH HOH . D 4 HOH A 156 557 557 HOH HOH . D 4 HOH A 157 558 558 HOH HOH . D 4 HOH A 158 559 559 HOH HOH . D 4 HOH A 159 560 560 HOH HOH . D 4 HOH A 160 561 561 HOH HOH . D 4 HOH A 161 562 562 HOH HOH . D 4 HOH A 162 563 563 HOH HOH . D 4 HOH A 163 564 564 HOH HOH . D 4 HOH A 164 565 565 HOH HOH . D 4 HOH A 165 566 566 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 HPR . . . C 3 0.564 21.07 38.473 1 8.58 ? N1 HPR 353 A 1 HETATM 2 C C2 HPR . . . C 3 1.532 20.69 39.305 1 8.01 ? C2 HPR 353 A 1 HETATM 3 N N3 HPR . . . C 3 2.684 20.218 38.859 1 9.14 ? N3 HPR 353 A 1 HETATM 4 C C4 HPR . . . C 3 2.909 20.101 37.523 1 2 ? C4 HPR 353 A 1 HETATM 5 C C5 HPR . . . C 3 1.977 20.468 36.63 1 2 ? C5 HPR 353 A 1 HETATM 6 C C6 HPR . . . C 3 0.727 20.996 37.095 1 6.06 ? C6 HPR 353 A 1 HETATM 7 O O6 HPR . . . C 3 0.548 22.363 36.596 1 15.52 ? O6 HPR 353 A 1 HETATM 8 N N7 HPR . . . C 3 2.474 20.231 35.386 1 2 ? N7 HPR 353 A 1 HETATM 9 C C8 HPR . . . C 3 3.714 19.732 35.529 1 4.6 ? C8 HPR 353 A 1 HETATM 10 N N9 HPR . . . C 3 3.981 19.623 36.843 1 2.06 ? N9 HPR 353 A 1 HETATM 11 C C1' HPR . . . C 3 5.13 18.968 37.431 1 10.72 ? C1' HPR 353 A 1 HETATM 12 C C2' HPR . . . C 3 5.49 17.684 36.584 1 12.25 ? C2' HPR 353 A 1 HETATM 13 O O2' HPR . . . C 3 5.774 16.565 37.438 1 13.17 ? O2' HPR 353 A 1 HETATM 14 C C3' HPR . . . C 3 6.701 18.002 35.697 1 10.92 ? C3' HPR 353 A 1 HETATM 15 O O3' HPR . . . C 3 7.527 16.844 35.517 1 5.61 ? O3' HPR 353 A 1 HETATM 16 C C4' HPR . . . C 3 7.289 19.035 36.822 1 4.23 ? C4' HPR 353 A 1 HETATM 17 O O4' HPR . . . C 3 6.281 19.791 37.366 1 12.91 ? O4' HPR 353 A 1 HETATM 18 C C5' HPR . . . C 3 8.362 19.97 36.261 1 2 ? C5' HPR 353 A 1 HETATM 19 O O5' HPR . . . C 3 8.002 20.397 34.925 1 8.53 ? O5' HPR 353 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #