data_1UJ5 # _model_server_result.job_id lkfHR5y1WtiR0dsUacZXxQ _model_server_result.datetime_utc '2024-11-06 03:10:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1uj5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":302}' # _entry.id 1UJ5 # _exptl.entry_id 1UJ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 230.11 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description RIBULOSE-5-PHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1UJ5 _cell.length_a 61.892 _cell.length_b 62.009 _cell.length_c 131.172 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UJ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 131.172 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H11 O8 P' _chem_comp.formula_weight 230.11 _chem_comp.id 5RP _chem_comp.mon_nstd_flag . _chem_comp.name RIBULOSE-5-PHOSPHATE _chem_comp.type saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 5RP sing 1 n n C2 O1 5RP sing 2 n n C2 H21 5RP sing 3 n n C2 H22 5RP sing 4 n n C3 C5 5RP sing 5 n n C3 O4 5RP doub 6 n n C5 O13 5RP sing 7 n n C5 C6 5RP sing 8 n n C5 H5 5RP sing 9 n n O13 H13 5RP sing 10 n n C6 O14 5RP sing 11 n n C6 C7 5RP sing 12 n n C6 H6 5RP sing 13 n n O14 H14 5RP sing 14 n n C7 O8 5RP sing 15 n n C7 H71 5RP sing 16 n n C7 H72 5RP sing 17 n n O8 P9 5RP sing 18 n n P9 O12 5RP doub 19 n n P9 O11 5RP sing 20 n n P9 O10 5RP sing 21 n n O11 H11 5RP sing 22 n n O10 H10 5RP sing 23 n n O1 HO1 5RP sing 24 n n # _atom_sites.entry_id 1UJ5 _atom_sites.fract_transf_matrix[1][1] 0.016157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016127 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007624 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5RP A 1 302 302 5RP INT . C 3 CL A 1 300 300 CL CL . D 3 CL A 1 301 301 CL CL . E 4 HOH A 1 401 401 HOH TIP . E 4 HOH A 2 402 402 HOH TIP . E 4 HOH A 3 403 403 HOH TIP . E 4 HOH A 4 404 404 HOH TIP . E 4 HOH A 5 405 405 HOH TIP . E 4 HOH A 6 406 406 HOH TIP . E 4 HOH A 7 407 407 HOH TIP . E 4 HOH A 8 408 408 HOH TIP . E 4 HOH A 9 409 409 HOH TIP . E 4 HOH A 10 410 410 HOH TIP . E 4 HOH A 11 411 411 HOH TIP . E 4 HOH A 12 412 412 HOH TIP . E 4 HOH A 13 413 413 HOH TIP . E 4 HOH A 14 414 414 HOH TIP . E 4 HOH A 15 415 415 HOH TIP . E 4 HOH A 16 416 416 HOH TIP . E 4 HOH A 17 417 417 HOH TIP . E 4 HOH A 18 418 418 HOH TIP . E 4 HOH A 19 419 419 HOH TIP . E 4 HOH A 20 420 420 HOH TIP . E 4 HOH A 21 421 421 HOH TIP . E 4 HOH A 22 422 422 HOH TIP . E 4 HOH A 23 423 423 HOH TIP . E 4 HOH A 24 424 424 HOH TIP . E 4 HOH A 25 425 425 HOH TIP . E 4 HOH A 26 426 426 HOH TIP . E 4 HOH A 27 427 427 HOH TIP . E 4 HOH A 28 428 428 HOH TIP . E 4 HOH A 29 429 429 HOH TIP . E 4 HOH A 30 430 430 HOH TIP . E 4 HOH A 31 431 431 HOH TIP . E 4 HOH A 32 432 432 HOH TIP . E 4 HOH A 33 433 433 HOH TIP . E 4 HOH A 34 434 434 HOH TIP . E 4 HOH A 35 435 435 HOH TIP . E 4 HOH A 36 436 436 HOH TIP . E 4 HOH A 37 437 437 HOH TIP . E 4 HOH A 38 438 438 HOH TIP . E 4 HOH A 39 439 439 HOH TIP . E 4 HOH A 40 440 440 HOH TIP . E 4 HOH A 41 441 441 HOH TIP . E 4 HOH A 42 442 442 HOH TIP . E 4 HOH A 43 443 443 HOH TIP . E 4 HOH A 44 444 444 HOH TIP . E 4 HOH A 45 445 445 HOH TIP . E 4 HOH A 46 446 446 HOH TIP . E 4 HOH A 47 447 447 HOH TIP . E 4 HOH A 48 448 448 HOH TIP . E 4 HOH A 49 449 449 HOH TIP . E 4 HOH A 50 450 450 HOH TIP . E 4 HOH A 51 451 451 HOH TIP . E 4 HOH A 52 452 452 HOH TIP . E 4 HOH A 53 453 453 HOH TIP . E 4 HOH A 54 454 454 HOH TIP . E 4 HOH A 55 455 455 HOH TIP . E 4 HOH A 56 456 456 HOH TIP . E 4 HOH A 57 457 457 HOH TIP . E 4 HOH A 58 458 458 HOH TIP . E 4 HOH A 59 459 459 HOH TIP . E 4 HOH A 60 460 460 HOH TIP . E 4 HOH A 61 461 461 HOH TIP . E 4 HOH A 62 462 462 HOH TIP . E 4 HOH A 63 463 463 HOH TIP . E 4 HOH A 64 464 464 HOH TIP . E 4 HOH A 65 465 465 HOH TIP . E 4 HOH A 66 466 466 HOH TIP . E 4 HOH A 67 467 467 HOH TIP . E 4 HOH A 68 468 468 HOH TIP . E 4 HOH A 69 469 469 HOH TIP . E 4 HOH A 70 470 470 HOH TIP . E 4 HOH A 71 471 471 HOH TIP . E 4 HOH A 72 472 472 HOH TIP . E 4 HOH A 73 473 473 HOH TIP . E 4 HOH A 74 474 474 HOH TIP . E 4 HOH A 75 475 475 HOH TIP . E 4 HOH A 76 476 476 HOH TIP . E 4 HOH A 77 477 477 HOH TIP . E 4 HOH A 78 478 478 HOH TIP . E 4 HOH A 79 479 479 HOH TIP . E 4 HOH A 80 480 480 HOH TIP . E 4 HOH A 81 481 481 HOH TIP . E 4 HOH A 82 482 482 HOH TIP . E 4 HOH A 83 483 483 HOH TIP . E 4 HOH A 84 484 484 HOH TIP . E 4 HOH A 85 485 485 HOH TIP . E 4 HOH A 86 486 486 HOH TIP . E 4 HOH A 87 487 487 HOH TIP . E 4 HOH A 88 488 488 HOH TIP . E 4 HOH A 89 489 489 HOH TIP . E 4 HOH A 90 490 490 HOH TIP . E 4 HOH A 91 491 491 HOH TIP . E 4 HOH A 92 492 492 HOH TIP . E 4 HOH A 93 493 493 HOH TIP . E 4 HOH A 94 494 494 HOH TIP . E 4 HOH A 95 495 495 HOH TIP . E 4 HOH A 96 496 496 HOH TIP . E 4 HOH A 97 497 497 HOH TIP . E 4 HOH A 98 498 498 HOH TIP . E 4 HOH A 99 499 499 HOH TIP . E 4 HOH A 100 500 500 HOH TIP . E 4 HOH A 101 501 501 HOH TIP . E 4 HOH A 102 502 502 HOH TIP . E 4 HOH A 103 503 503 HOH TIP . E 4 HOH A 104 504 504 HOH TIP . E 4 HOH A 105 505 505 HOH TIP . E 4 HOH A 106 506 506 HOH TIP . E 4 HOH A 107 507 507 HOH TIP . E 4 HOH A 108 508 508 HOH TIP . E 4 HOH A 109 509 509 HOH TIP . E 4 HOH A 110 510 510 HOH TIP . E 4 HOH A 111 511 511 HOH TIP . E 4 HOH A 112 512 512 HOH TIP . E 4 HOH A 113 513 513 HOH TIP . E 4 HOH A 114 514 514 HOH TIP . E 4 HOH A 115 515 515 HOH TIP . E 4 HOH A 116 516 516 HOH TIP . E 4 HOH A 117 517 517 HOH TIP . E 4 HOH A 118 518 518 HOH TIP . E 4 HOH A 119 519 519 HOH TIP . E 4 HOH A 120 520 520 HOH TIP . E 4 HOH A 121 521 521 HOH TIP . E 4 HOH A 122 522 522 HOH TIP . E 4 HOH A 123 523 523 HOH TIP . E 4 HOH A 124 525 525 HOH TIP . E 4 HOH A 125 526 526 HOH TIP . E 4 HOH A 126 527 527 HOH TIP . E 4 HOH A 127 528 528 HOH TIP . E 4 HOH A 128 529 529 HOH TIP . E 4 HOH A 129 531 531 HOH TIP . E 4 HOH A 130 532 532 HOH TIP . E 4 HOH A 131 533 533 HOH TIP . E 4 HOH A 132 534 534 HOH TIP . E 4 HOH A 133 535 535 HOH TIP . E 4 HOH A 134 537 537 HOH TIP . E 4 HOH A 135 538 538 HOH TIP . E 4 HOH A 136 539 539 HOH TIP . E 4 HOH A 137 540 540 HOH TIP . E 4 HOH A 138 541 541 HOH TIP . E 4 HOH A 139 542 542 HOH TIP . E 4 HOH A 140 543 543 HOH TIP . E 4 HOH A 141 544 544 HOH TIP . E 4 HOH A 142 545 545 HOH TIP . E 4 HOH A 143 546 546 HOH TIP . E 4 HOH A 144 547 547 HOH TIP . E 4 HOH A 145 548 548 HOH TIP . E 4 HOH A 146 549 549 HOH TIP . E 4 HOH A 147 550 550 HOH TIP . E 4 HOH A 148 551 551 HOH TIP . E 4 HOH A 149 552 552 HOH TIP . E 4 HOH A 150 553 553 HOH TIP . E 4 HOH A 151 554 554 HOH TIP . E 4 HOH A 152 555 555 HOH TIP . E 4 HOH A 153 556 556 HOH TIP . E 4 HOH A 154 557 557 HOH TIP . E 4 HOH A 155 558 558 HOH TIP . E 4 HOH A 156 559 559 HOH TIP . E 4 HOH A 157 560 560 HOH TIP . E 4 HOH A 158 561 561 HOH TIP . E 4 HOH A 159 562 562 HOH TIP . E 4 HOH A 160 563 563 HOH TIP . E 4 HOH A 161 564 564 HOH TIP . E 4 HOH A 162 565 565 HOH TIP . E 4 HOH A 163 566 566 HOH TIP . E 4 HOH A 164 567 567 HOH TIP . E 4 HOH A 165 568 568 HOH TIP . E 4 HOH A 166 569 569 HOH TIP . E 4 HOH A 167 570 570 HOH TIP . E 4 HOH A 168 571 571 HOH TIP . E 4 HOH A 169 572 572 HOH TIP . E 4 HOH A 170 573 573 HOH TIP . E 4 HOH A 171 574 574 HOH TIP . E 4 HOH A 172 575 575 HOH TIP . E 4 HOH A 173 576 576 HOH TIP . E 4 HOH A 174 577 577 HOH TIP . E 4 HOH A 175 578 578 HOH TIP . E 4 HOH A 176 579 579 HOH TIP . E 4 HOH A 177 580 580 HOH TIP . E 4 HOH A 178 581 581 HOH TIP . E 4 HOH A 179 582 582 HOH TIP . E 4 HOH A 180 583 583 HOH TIP . E 4 HOH A 181 584 584 HOH TIP . E 4 HOH A 182 585 585 HOH TIP . E 4 HOH A 183 586 586 HOH TIP . E 4 HOH A 184 587 587 HOH TIP . E 4 HOH A 185 588 588 HOH TIP . E 4 HOH A 186 589 589 HOH TIP . E 4 HOH A 187 590 590 HOH TIP . E 4 HOH A 188 591 591 HOH TIP . E 4 HOH A 189 592 592 HOH TIP . E 4 HOH A 190 593 593 HOH TIP . E 4 HOH A 191 596 596 HOH TIP . E 4 HOH A 192 597 597 HOH TIP . E 4 HOH A 193 598 598 HOH TIP . E 4 HOH A 194 599 599 HOH TIP . E 4 HOH A 195 600 600 HOH TIP . E 4 HOH A 196 601 601 HOH TIP . E 4 HOH A 197 602 602 HOH TIP . E 4 HOH A 198 605 605 HOH TIP . E 4 HOH A 199 606 606 HOH TIP . E 4 HOH A 200 607 607 HOH TIP . E 4 HOH A 201 608 608 HOH TIP . E 4 HOH A 202 609 609 HOH TIP . E 4 HOH A 203 610 610 HOH TIP . E 4 HOH A 204 611 611 HOH TIP . E 4 HOH A 205 612 612 HOH TIP . E 4 HOH A 206 613 613 HOH TIP . E 4 HOH A 207 614 614 HOH TIP . E 4 HOH A 208 615 615 HOH TIP . E 4 HOH A 209 616 616 HOH TIP . E 4 HOH A 210 617 617 HOH TIP . E 4 HOH A 211 619 619 HOH TIP . E 4 HOH A 212 620 620 HOH TIP . E 4 HOH A 213 621 621 HOH TIP . E 4 HOH A 214 622 622 HOH TIP . E 4 HOH A 215 623 623 HOH TIP . E 4 HOH A 216 624 624 HOH TIP . E 4 HOH A 217 625 625 HOH TIP . E 4 HOH A 218 626 626 HOH TIP . E 4 HOH A 219 628 628 HOH TIP . E 4 HOH A 220 629 629 HOH TIP . E 4 HOH A 221 630 630 HOH TIP . E 4 HOH A 222 631 631 HOH TIP . E 4 HOH A 223 632 632 HOH TIP . E 4 HOH A 224 633 633 HOH TIP . E 4 HOH A 225 634 634 HOH TIP . E 4 HOH A 226 635 635 HOH TIP . E 4 HOH A 227 636 636 HOH TIP . E 4 HOH A 228 637 637 HOH TIP . E 4 HOH A 229 639 639 HOH TIP . E 4 HOH A 230 640 640 HOH TIP . E 4 HOH A 231 641 641 HOH TIP . E 4 HOH A 232 642 642 HOH TIP . E 4 HOH A 233 643 643 HOH TIP . E 4 HOH A 234 645 645 HOH TIP . E 4 HOH A 235 646 646 HOH TIP . E 4 HOH A 236 647 647 HOH TIP . E 4 HOH A 237 648 648 HOH TIP . E 4 HOH A 238 649 649 HOH TIP . E 4 HOH A 239 650 650 HOH TIP . E 4 HOH A 240 651 651 HOH TIP . E 4 HOH A 241 652 652 HOH TIP . E 4 HOH A 242 653 653 HOH TIP . E 4 HOH A 243 654 654 HOH TIP . E 4 HOH A 244 655 655 HOH TIP . E 4 HOH A 245 656 656 HOH TIP . E 4 HOH A 246 657 657 HOH TIP . E 4 HOH A 247 658 658 HOH TIP . E 4 HOH A 248 659 659 HOH TIP . E 4 HOH A 249 660 660 HOH TIP . E 4 HOH A 250 661 661 HOH TIP . E 4 HOH A 251 662 662 HOH TIP . E 4 HOH A 252 663 663 HOH TIP . E 4 HOH A 253 664 664 HOH TIP . E 4 HOH A 254 665 665 HOH TIP . E 4 HOH A 255 666 666 HOH TIP . E 4 HOH A 256 667 667 HOH TIP . E 4 HOH A 257 668 668 HOH TIP . E 4 HOH A 258 669 669 HOH TIP . E 4 HOH A 259 670 670 HOH TIP . E 4 HOH A 260 671 671 HOH TIP . E 4 HOH A 261 672 672 HOH TIP . E 4 HOH A 262 673 673 HOH TIP . E 4 HOH A 263 674 674 HOH TIP . E 4 HOH A 264 675 675 HOH TIP . E 4 HOH A 265 676 676 HOH TIP . E 4 HOH A 266 677 677 HOH TIP . E 4 HOH A 267 678 678 HOH TIP . E 4 HOH A 268 679 679 HOH TIP . E 4 HOH A 269 680 680 HOH TIP . E 4 HOH A 270 681 681 HOH TIP . E 4 HOH A 271 682 682 HOH TIP . E 4 HOH A 272 683 683 HOH TIP . E 4 HOH A 273 684 684 HOH TIP . E 4 HOH A 274 685 685 HOH TIP . E 4 HOH A 275 686 686 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 5RP . . . B 2 16.296 0.339 48.685 1 21.07 ? C2 5RP 302 A 1 HETATM 2 C C3 5RP . . . B 2 15.078 0.875 47.98 1 19.14 ? C3 5RP 302 A 1 HETATM 3 C C5 5RP . . . B 2 15.292 1.121 46.578 1 17.89 ? C5 5RP 302 A 1 HETATM 4 O O13 5RP . . . B 2 14.733 2.399 46.209 1 13.57 ? O13 5RP 302 A 1 HETATM 5 C C6 5RP . . . B 2 14.526 -0.017 45.855 1 16.5 ? C6 5RP 302 A 1 HETATM 6 O O14 5RP . . . B 2 15.081 -1.329 46.216 1 17.8 ? O14 5RP 302 A 1 HETATM 7 C C7 5RP . . . B 2 14.599 0.02 44.324 1 15.58 ? C7 5RP 302 A 1 HETATM 8 O O8 5RP . . . B 2 15.73 -0.225 43.511 1 14.43 ? O8 5RP 302 A 1 HETATM 9 P P9 5RP . . . B 2 15.858 -0.209 41.982 1 14.32 ? P9 5RP 302 A 1 HETATM 10 O O12 5RP . . . B 2 17.241 -0.538 41.588 1 15.35 ? O12 5RP 302 A 1 HETATM 11 O O11 5RP . . . B 2 15.476 1.195 41.358 1 12.7 ? O11 5RP 302 A 1 HETATM 12 O O10 5RP . . . B 2 14.779 -1.135 41.437 1 14.11 ? O10 5RP 302 A 1 HETATM 13 O O4 5RP . . . B 2 13.856 1.103 48.604 1 22.83 ? O4 5RP 302 A 1 HETATM 14 O O1 5RP . . . B 2 16.322 0.016 50.018 1 19.62 ? O1 5RP 302 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #