data_1UKY
#
_model_server_result.job_id            IMA4y52CuxkqJD4KnH6FCw 
_model_server_result.datetime_utc      '2024-11-14 20:11:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1uky 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":205}' 
#
_entry.id    1UKY 
#
_exptl.entry_id    1UKY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1UKY 
_cell.length_a            64.2 
_cell.length_b            64.2 
_cell.length_c            185 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1UKY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             129 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              130 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             184 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              185 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.999 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                ADP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B ADP doub 1 n n 
PB O2B ADP sing 2 n n 
PB O3B ADP sing 3 n n 
PB O3A ADP sing 4 n n 
O2B HOB2 ADP sing 5 n n 
O3B HOB3 ADP sing 6 n n 
PA O1A ADP doub 7 n n 
PA O2A ADP sing 8 n n 
PA O3A ADP sing 9 n n 
PA O5' ADP sing 10 n n 
O2A HOA2 ADP sing 11 n n 
O5' C5' ADP sing 12 n n 
C5' C4' ADP sing 13 n n 
C5' "H5'1" ADP sing 14 n n 
C5' "H5'2" ADP sing 15 n n 
C4' O4' ADP sing 16 n n 
C4' C3' ADP sing 17 n n 
C4' H4' ADP sing 18 n n 
O4' C1' ADP sing 19 n n 
C3' O3' ADP sing 20 n n 
C3' C2' ADP sing 21 n n 
C3' H3' ADP sing 22 n n 
O3' HO3' ADP sing 23 n n 
C2' O2' ADP sing 24 n n 
C2' C1' ADP sing 25 n n 
C2' H2' ADP sing 26 n n 
O2' HO2' ADP sing 27 n n 
C1' N9 ADP sing 28 n n 
C1' H1' ADP sing 29 n n 
N9 C8 ADP sing 30 n y 
N9 C4 ADP sing 31 n y 
C8 N7 ADP doub 32 n y 
C8 H8 ADP sing 33 n n 
N7 C5 ADP sing 34 n y 
C5 C6 ADP sing 35 n y 
C5 C4 ADP doub 36 n y 
C6 N6 ADP sing 37 n n 
C6 N1 ADP doub 38 n y 
N6 HN61 ADP sing 39 n n 
N6 HN62 ADP sing 40 n n 
N1 C2 ADP sing 41 n y 
C2 N3 ADP doub 42 n y 
C2 H2 ADP sing 43 n n 
N3 C4 ADP sing 44 n y 
#
_atom_sites.entry_id                     1UKY 
_atom_sites.fract_transf_matrix[1][1]    0.015576 
_atom_sites.fract_transf_matrix[1][2]    0.008993 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017986 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005405 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ADP A 1 205 205 ADP ADP . 
C 2 ADP A 1 206 206 ADP ADP . 
D 3 HOH A 1 301 301 HOH HOH . 
D 3 HOH A 2 302 302 HOH HOH . 
D 3 HOH A 3 303 303 HOH HOH . 
D 3 HOH A 4 304 304 HOH HOH . 
D 3 HOH A 5 305 305 HOH HOH . 
D 3 HOH A 6 306 306 HOH HOH . 
D 3 HOH A 7 307 307 HOH HOH . 
D 3 HOH A 8 308 308 HOH HOH . 
D 3 HOH A 9 309 309 HOH HOH . 
D 3 HOH A 10 310 310 HOH HOH . 
D 3 HOH A 11 311 311 HOH HOH . 
D 3 HOH A 12 312 312 HOH HOH . 
D 3 HOH A 13 313 313 HOH HOH . 
D 3 HOH A 14 314 314 HOH HOH . 
D 3 HOH A 15 315 315 HOH HOH . 
D 3 HOH A 16 316 316 HOH HOH . 
D 3 HOH A 17 317 317 HOH HOH . 
D 3 HOH A 18 318 318 HOH HOH . 
D 3 HOH A 19 319 319 HOH HOH . 
D 3 HOH A 20 320 320 HOH HOH . 
D 3 HOH A 21 321 321 HOH HOH . 
D 3 HOH A 22 322 322 HOH HOH . 
D 3 HOH A 23 323 323 HOH HOH . 
D 3 HOH A 24 324 324 HOH HOH . 
D 3 HOH A 25 325 325 HOH HOH . 
D 3 HOH A 26 326 326 HOH HOH . 
D 3 HOH A 27 327 327 HOH HOH . 
D 3 HOH A 28 328 328 HOH HOH . 
D 3 HOH A 29 329 329 HOH HOH . 
D 3 HOH A 30 330 330 HOH HOH . 
D 3 HOH A 31 331 331 HOH HOH . 
D 3 HOH A 32 332 332 HOH HOH . 
D 3 HOH A 33 333 333 HOH HOH . 
D 3 HOH A 34 334 334 HOH HOH . 
D 3 HOH A 35 335 335 HOH HOH . 
D 3 HOH A 36 336 336 HOH HOH . 
D 3 HOH A 37 337 337 HOH HOH . 
D 3 HOH A 38 338 338 HOH HOH . 
D 3 HOH A 39 339 339 HOH HOH . 
D 3 HOH A 40 340 340 HOH HOH . 
D 3 HOH A 41 341 341 HOH HOH . 
D 3 HOH A 42 342 342 HOH HOH . 
D 3 HOH A 43 343 343 HOH HOH . 
D 3 HOH A 44 344 344 HOH HOH . 
D 3 HOH A 45 345 345 HOH HOH . 
D 3 HOH A 46 346 346 HOH HOH . 
D 3 HOH A 47 347 347 HOH HOH . 
D 3 HOH A 48 348 348 HOH HOH . 
D 3 HOH A 49 349 349 HOH HOH . 
D 3 HOH A 50 350 350 HOH HOH . 
D 3 HOH A 51 351 351 HOH HOH . 
D 3 HOH A 52 352 352 HOH HOH . 
D 3 HOH A 53 353 353 HOH HOH . 
D 3 HOH A 54 354 354 HOH HOH . 
D 3 HOH A 55 355 355 HOH HOH . 
D 3 HOH A 56 356 356 HOH HOH . 
D 3 HOH A 57 357 357 HOH HOH . 
D 3 HOH A 58 358 358 HOH HOH . 
D 3 HOH A 59 359 359 HOH HOH . 
D 3 HOH A 60 360 360 HOH HOH . 
D 3 HOH A 61 361 361 HOH HOH . 
D 3 HOH A 62 362 362 HOH HOH . 
D 3 HOH A 63 363 363 HOH HOH . 
D 3 HOH A 64 364 364 HOH HOH . 
D 3 HOH A 65 365 365 HOH HOH . 
D 3 HOH A 66 366 366 HOH HOH . 
D 3 HOH A 67 367 367 HOH HOH . 
D 3 HOH A 68 368 368 HOH HOH . 
D 3 HOH A 69 369 369 HOH HOH . 
D 3 HOH A 70 370 370 HOH HOH . 
D 3 HOH A 71 371 371 HOH HOH . 
D 3 HOH A 72 372 372 HOH HOH . 
D 3 HOH A 73 373 373 HOH HOH . 
D 3 HOH A 74 374 374 HOH HOH . 
D 3 HOH A 75 375 375 HOH HOH . 
D 3 HOH A 76 376 376 HOH HOH . 
D 3 HOH A 77 377 377 HOH HOH . 
D 3 HOH A 78 378 378 HOH HOH . 
D 3 HOH A 79 379 379 HOH HOH . 
D 3 HOH A 80 380 380 HOH HOH . 
D 3 HOH A 81 381 381 HOH HOH . 
D 3 HOH A 82 382 382 HOH HOH . 
D 3 HOH A 83 383 383 HOH HOH . 
D 3 HOH A 84 384 384 HOH HOH . 
D 3 HOH A 85 385 385 HOH HOH . 
D 3 HOH A 86 386 386 HOH HOH . 
D 3 HOH A 87 387 387 HOH HOH . 
D 3 HOH A 88 388 388 HOH HOH . 
D 3 HOH A 89 389 389 HOH HOH . 
D 3 HOH A 90 390 390 HOH HOH . 
D 3 HOH A 91 391 391 HOH HOH . 
D 3 HOH A 92 392 392 HOH HOH . 
D 3 HOH A 93 393 393 HOH HOH . 
D 3 HOH A 94 394 394 HOH HOH . 
D 3 HOH A 95 395 395 HOH HOH . 
D 3 HOH A 96 396 396 HOH HOH . 
D 3 HOH A 97 397 397 HOH HOH . 
D 3 HOH A 98 398 398 HOH HOH . 
D 3 HOH A 99 399 399 HOH HOH . 
D 3 HOH A 100 400 400 HOH HOH . 
D 3 HOH A 101 401 401 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB ADP . . . B 2 13.883 33.415 6.444 1 11.56 ? PB ADP 205 A 1 
HETATM 2 O O1B ADP . . . B 2 12.634 33.479 7.159 1 14.86 ? O1B ADP 205 A 1 
HETATM 3 O O2B ADP . . . B 2 14.265 32.158 5.874 1 7.58 ? O2B ADP 205 A 1 
HETATM 4 O O3B ADP . . . B 2 15.079 33.961 7.158 1 8.97 ? O3B ADP 205 A 1 
HETATM 5 P PA ADP . . . B 2 12.849 35.651 4.751 1 13.06 ? PA ADP 205 A 1 
HETATM 6 O O1A ADP . . . B 2 12.762 36.802 5.64 1 10.78 ? O1A ADP 205 A 1 
HETATM 7 O O2A ADP . . . B 2 11.579 35.162 4.274 1 8.18 ? O2A ADP 205 A 1 
HETATM 8 O O3A ADP . . . B 2 13.652 34.439 5.3 1 13.17 ? O3A ADP 205 A 1 
HETATM 9 O O5' ADP . . . B 2 13.605 36.142 3.455 1 17.03 ? O5' ADP 205 A 1 
HETATM 10 C C5' ADP . . . B 2 14.887 36.799 3.545 1 14.44 ? C5' ADP 205 A 1 
HETATM 11 C C4' ADP . . . B 2 14.924 38.184 2.863 1 18.21 ? C4' ADP 205 A 1 
HETATM 12 O O4' ADP . . . B 2 14.958 38.121 1.41 1 15.53 ? O4' ADP 205 A 1 
HETATM 13 C C3' ADP . . . B 2 13.669 39.06 3.199 1 17.93 ? C3' ADP 205 A 1 
HETATM 14 O O3' ADP . . . B 2 13.989 40.456 3.052 1 23.92 ? O3' ADP 205 A 1 
HETATM 15 C C2' ADP . . . B 2 12.65 38.632 2.099 1 17.51 ? C2' ADP 205 A 1 
HETATM 16 O O2' ADP . . . B 2 11.96 39.765 1.569 1 10.96 ? O2' ADP 205 A 1 
HETATM 17 C C1' ADP . . . B 2 13.589 38.012 1.082 1 16.2 ? C1' ADP 205 A 1 
HETATM 18 N N9 ADP . . . B 2 13.147 37.141 0.064 1 16.32 ? N9 ADP 205 A 1 
HETATM 19 C C8 ADP . . . B 2 12.45 36.011 0.319 1 17.25 ? C8 ADP 205 A 1 
HETATM 20 N N7 ADP . . . B 2 12.346 35.267 -0.739 1 21.22 ? N7 ADP 205 A 1 
HETATM 21 C C5 ADP . . . B 2 12.998 35.911 -1.774 1 19.9 ? C5 ADP 205 A 1 
HETATM 22 C C6 ADP . . . B 2 13.233 35.567 -3.132 1 18.02 ? C6 ADP 205 A 1 
HETATM 23 N N6 ADP . . . B 2 12.825 34.435 -3.711 1 9.74 ? N6 ADP 205 A 1 
HETATM 24 N N1 ADP . . . B 2 13.922 36.461 -3.817 1 13.7 ? N1 ADP 205 A 1 
HETATM 25 C C2 ADP . . . B 2 14.331 37.581 -3.191 1 18.89 ? C2 ADP 205 A 1 
HETATM 26 N N3 ADP . . . B 2 14.202 38.039 -1.958 1 18.61 ? N3 ADP 205 A 1 
HETATM 27 C C4 ADP . . . B 2 13.499 37.135 -1.248 1 17.59 ? C4 ADP 205 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           27 
#