data_1UML # _model_server_result.job_id bsAt10spMme_mY0Hz8ezQw _model_server_result.datetime_utc '2024-12-29 12:33:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1uml # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 1UML # _exptl.entry_id 1UML _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 445.514 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-((1R)-1-(HYDROXYMETHYL)-3-{6-[(3-PHENYLPROPANOYL)AMINO]-1H-INDOL-1-YL}PROPYL)-1H-IMIDAZOLE-4-CARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1UML _cell.length_a 78.32 _cell.length_b 78.32 _cell.length_c 138.32 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UML _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 14 A HIS 15 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc2 A NE2 HIS 16 A HIS 17 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc3 A NE2 HIS 213 A HIS 214 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc4 A OD2 ASP 294 A ASP 295 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc5 B ZN ZN . A ZN 400 1_555 D O HOH . A HOH 1117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? # _chem_comp.formula 'C25 H27 N5 O3' _chem_comp.formula_weight 445.514 _chem_comp.id FR4 _chem_comp.mon_nstd_flag . _chem_comp.name 1-((1R)-1-(HYDROXYMETHYL)-3-{6-[(3-PHENYLPROPANOYL)AMINO]-1H-INDOL-1-YL}PROPYL)-1H-IMIDAZOLE-4-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-((1R)-1-(HYDROXYMETHYL)-3-{6-[(3-PHENYLPROPYL)AMINO]-1H-INDOL-1-YL}-1H-IMIDAZOLE-4-CARBOXAMIDE;FR233624 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 FR4 sing 83 n y C1 C5 FR4 doub 84 n y C1 H1 FR4 sing 85 n n N2 C3 FR4 sing 86 n y N2 C13 FR4 sing 87 n n C3 N4 FR4 doub 88 n y C3 H3 FR4 sing 89 n n N4 C5 FR4 sing 90 n y C5 C8 FR4 sing 91 n n C8 O9 FR4 doub 92 n n C8 N10 FR4 sing 93 n n N10 H101 FR4 sing 94 n n N10 H102 FR4 sing 95 n n C13 C14 FR4 sing 96 n n C13 C18 FR4 sing 97 n n C13 H13 FR4 sing 98 n n C14 O15 FR4 sing 99 n n C14 H141 FR4 sing 100 n n C14 H142 FR4 sing 101 n n O15 H15 FR4 sing 102 n n C18 C19 FR4 sing 103 n n C18 H181 FR4 sing 104 n n C18 H182 FR4 sing 105 n n C19 N22 FR4 sing 106 n n C19 H191 FR4 sing 107 n n C19 H192 FR4 sing 108 n n N22 C27 FR4 sing 109 n y N22 C30 FR4 sing 110 n y C27 C28 FR4 doub 111 n y C27 H27 FR4 sing 112 n n C28 C29 FR4 sing 113 n y C28 H28 FR4 sing 114 n n C29 C30 FR4 doub 115 n y C29 C31 FR4 sing 116 n y C30 C34 FR4 sing 117 n y C31 C32 FR4 doub 118 n y C31 H31 FR4 sing 119 n n C32 C33 FR4 sing 120 n y C32 H32 FR4 sing 121 n n C33 C34 FR4 doub 122 n y C33 N1 FR4 sing 123 n n C34 H34 FR4 sing 124 n n N1 C2 FR4 sing 125 n n N1 HN1 FR4 sing 126 n n C2 O1 FR4 doub 127 n n C2 C4 FR4 sing 128 n n C4 C6 FR4 sing 129 n n C4 H41 FR4 sing 130 n n C4 H42 FR4 sing 131 n n C6 C11 FR4 sing 132 n n C6 H61 FR4 sing 133 n n C6 H62 FR4 sing 134 n n C7 C11 FR4 doub 135 n y C7 C15 FR4 sing 136 n y C7 H7 FR4 sing 137 n n C11 C9 FR4 sing 138 n y C9 C12 FR4 doub 139 n y C9 H9 FR4 sing 140 n n C12 C10 FR4 sing 141 n y C12 H12 FR4 sing 142 n n C10 C15 FR4 doub 143 n y C10 H10 FR4 sing 144 n n C15 H2 FR4 sing 145 n n # _atom_sites.entry_id 1UML _atom_sites.fract_transf_matrix[1][1] 0.012768 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00723 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 400 400 ZN ZN . C 3 FR4 A 1 1001 1001 FR4 FR4 . D 4 HOH A 1 1002 49 HOH HOH . D 4 HOH A 2 1003 50 HOH HOH . D 4 HOH A 3 1004 51 HOH HOH . D 4 HOH A 4 1005 52 HOH HOH . D 4 HOH A 5 1006 53 HOH HOH . D 4 HOH A 6 1007 54 HOH HOH . D 4 HOH A 7 1008 55 HOH HOH . D 4 HOH A 8 1009 56 HOH HOH . D 4 HOH A 9 1010 57 HOH HOH . D 4 HOH A 10 1011 58 HOH HOH . D 4 HOH A 11 1012 59 HOH HOH . D 4 HOH A 12 1013 60 HOH HOH . D 4 HOH A 13 1014 61 HOH HOH . D 4 HOH A 14 1015 62 HOH HOH . D 4 HOH A 15 1016 63 HOH HOH . D 4 HOH A 16 1017 64 HOH HOH . D 4 HOH A 17 1018 65 HOH HOH . D 4 HOH A 18 1019 66 HOH HOH . D 4 HOH A 19 1020 67 HOH HOH . D 4 HOH A 20 1021 68 HOH HOH . D 4 HOH A 21 1022 69 HOH HOH . D 4 HOH A 22 1023 70 HOH HOH . D 4 HOH A 23 1024 71 HOH HOH . D 4 HOH A 24 1025 72 HOH HOH . D 4 HOH A 25 1026 73 HOH HOH . D 4 HOH A 26 1027 74 HOH HOH . D 4 HOH A 27 1028 75 HOH HOH . D 4 HOH A 28 1029 76 HOH HOH . D 4 HOH A 29 1030 77 HOH HOH . D 4 HOH A 30 1031 78 HOH HOH . D 4 HOH A 31 1032 79 HOH HOH . D 4 HOH A 32 1033 80 HOH HOH . D 4 HOH A 33 1034 81 HOH HOH . D 4 HOH A 34 1035 82 HOH HOH . D 4 HOH A 35 1036 83 HOH HOH . D 4 HOH A 36 1037 84 HOH HOH . D 4 HOH A 37 1038 85 HOH HOH . D 4 HOH A 38 1039 86 HOH HOH . D 4 HOH A 39 1040 87 HOH HOH . D 4 HOH A 40 1041 88 HOH HOH . D 4 HOH A 41 1042 89 HOH HOH . D 4 HOH A 42 1043 90 HOH HOH . D 4 HOH A 43 1044 91 HOH HOH . D 4 HOH A 44 1045 92 HOH HOH . D 4 HOH A 45 1046 93 HOH HOH . D 4 HOH A 46 1047 94 HOH HOH . D 4 HOH A 47 1048 95 HOH HOH . D 4 HOH A 48 1049 96 HOH HOH . D 4 HOH A 49 1050 97 HOH HOH . D 4 HOH A 50 1051 98 HOH HOH . D 4 HOH A 51 1052 99 HOH HOH . D 4 HOH A 52 1053 100 HOH HOH . D 4 HOH A 53 1054 101 HOH HOH . D 4 HOH A 54 1055 102 HOH HOH . D 4 HOH A 55 1056 103 HOH HOH . D 4 HOH A 56 1057 104 HOH HOH . D 4 HOH A 57 1058 105 HOH HOH . D 4 HOH A 58 1059 106 HOH HOH . D 4 HOH A 59 1060 107 HOH HOH . D 4 HOH A 60 1061 108 HOH HOH . D 4 HOH A 61 1062 109 HOH HOH . D 4 HOH A 62 1063 110 HOH HOH . D 4 HOH A 63 1064 111 HOH HOH . D 4 HOH A 64 1065 112 HOH HOH . D 4 HOH A 65 1066 113 HOH HOH . D 4 HOH A 66 1067 114 HOH HOH . D 4 HOH A 67 1068 115 HOH HOH . D 4 HOH A 68 1069 116 HOH HOH . D 4 HOH A 69 1070 117 HOH HOH . D 4 HOH A 70 1071 118 HOH HOH . D 4 HOH A 71 1072 119 HOH HOH . D 4 HOH A 72 1073 120 HOH HOH . D 4 HOH A 73 1074 121 HOH HOH . D 4 HOH A 74 1075 122 HOH HOH . D 4 HOH A 75 1076 123 HOH HOH . D 4 HOH A 76 1077 124 HOH HOH . D 4 HOH A 77 1078 125 HOH HOH . D 4 HOH A 78 1079 126 HOH HOH . D 4 HOH A 79 1080 127 HOH HOH . D 4 HOH A 80 1081 128 HOH HOH . D 4 HOH A 81 1082 129 HOH HOH . D 4 HOH A 82 1083 130 HOH HOH . D 4 HOH A 83 1084 131 HOH HOH . D 4 HOH A 84 1085 132 HOH HOH . D 4 HOH A 85 1086 133 HOH HOH . D 4 HOH A 86 1087 134 HOH HOH . D 4 HOH A 87 1088 135 HOH HOH . D 4 HOH A 88 1089 136 HOH HOH . D 4 HOH A 89 1090 137 HOH HOH . D 4 HOH A 90 1091 138 HOH HOH . D 4 HOH A 91 1092 139 HOH HOH . D 4 HOH A 92 1093 140 HOH HOH . D 4 HOH A 93 1094 141 HOH HOH . D 4 HOH A 94 1095 142 HOH HOH . D 4 HOH A 95 1096 143 HOH HOH . D 4 HOH A 96 1097 144 HOH HOH . D 4 HOH A 97 1098 145 HOH HOH . D 4 HOH A 98 1099 146 HOH HOH . D 4 HOH A 99 1100 147 HOH HOH . D 4 HOH A 100 1101 148 HOH HOH . D 4 HOH A 101 1102 149 HOH HOH . D 4 HOH A 102 1103 150 HOH HOH . D 4 HOH A 103 1104 151 HOH HOH . D 4 HOH A 104 1105 152 HOH HOH . D 4 HOH A 105 1106 153 HOH HOH . D 4 HOH A 106 1107 154 HOH HOH . D 4 HOH A 107 1108 155 HOH HOH . D 4 HOH A 108 1109 156 HOH HOH . D 4 HOH A 109 1110 157 HOH HOH . D 4 HOH A 110 1111 158 HOH HOH . D 4 HOH A 111 1112 159 HOH HOH . D 4 HOH A 112 1113 160 HOH HOH . D 4 HOH A 113 1114 161 HOH HOH . D 4 HOH A 114 1115 162 HOH HOH . D 4 HOH A 115 1116 163 HOH HOH . D 4 HOH A 116 1117 164 HOH HOH . D 4 HOH A 117 1118 165 HOH HOH . D 4 HOH A 118 1119 166 HOH HOH . D 4 HOH A 119 1120 167 HOH HOH . D 4 HOH A 120 1121 168 HOH HOH . D 4 HOH A 121 1122 169 HOH HOH . D 4 HOH A 122 1123 170 HOH HOH . D 4 HOH A 123 1124 171 HOH HOH . D 4 HOH A 124 1125 172 HOH HOH . D 4 HOH A 125 1126 173 HOH HOH . D 4 HOH A 126 1127 174 HOH HOH . D 4 HOH A 127 1128 175 HOH HOH . D 4 HOH A 128 1129 176 HOH HOH . D 4 HOH A 129 1130 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FR4 . . . C 3 51.829 54.677 20.859 1 14.44 ? C1 FR4 1001 A 1 HETATM 2 N N2 FR4 . . . C 3 51.888 55.688 21.919 1 14.26 ? N2 FR4 1001 A 1 HETATM 3 C C3 FR4 . . . C 3 51.86 55.1 23.126 1 14.69 ? C3 FR4 1001 A 1 HETATM 4 N N4 FR4 . . . C 3 51.779 53.775 22.962 1 13.53 ? N4 FR4 1001 A 1 HETATM 5 C C5 FR4 . . . C 3 51.735 53.52 21.529 1 14.05 ? C5 FR4 1001 A 1 HETATM 6 C C8 FR4 . . . C 3 51.607 52.181 20.916 1 17.91 ? C8 FR4 1001 A 1 HETATM 7 O O9 FR4 . . . C 3 51.361 52.121 19.726 1 22.95 ? O9 FR4 1001 A 1 HETATM 8 N N10 FR4 . . . C 3 51.749 51.096 21.682 1 20.51 ? N10 FR4 1001 A 1 HETATM 9 C C13 FR4 . . . C 3 51.988 57.13 21.723 1 15.9 ? C13 FR4 1001 A 1 HETATM 10 C C14 FR4 . . . C 3 53.455 57.568 21.566 1 16.88 ? C14 FR4 1001 A 1 HETATM 11 O O15 FR4 . . . C 3 54.251 57.211 22.666 1 21.66 ? O15 FR4 1001 A 1 HETATM 12 C C18 FR4 . . . C 3 51.106 57.631 20.564 1 17.96 ? C18 FR4 1001 A 1 HETATM 13 C C19 FR4 . . . C 3 49.651 57.152 20.602 1 18.29 ? C19 FR4 1001 A 1 HETATM 14 N N22 FR4 . . . C 3 49.041 57.303 19.279 1 18.85 ? N22 FR4 1001 A 1 HETATM 15 C C27 FR4 . . . C 3 48.548 58.435 18.704 1 20.39 ? C27 FR4 1001 A 1 HETATM 16 C C28 FR4 . . . C 3 48.091 58.164 17.41 1 20.67 ? C28 FR4 1001 A 1 HETATM 17 C C29 FR4 . . . C 3 48.322 56.758 17.202 1 19.81 ? C29 FR4 1001 A 1 HETATM 18 C C30 FR4 . . . C 3 48.918 56.25 18.394 1 18.6 ? C30 FR4 1001 A 1 HETATM 19 C C31 FR4 . . . C 3 48.075 55.926 16.142 1 19.81 ? C31 FR4 1001 A 1 HETATM 20 C C32 FR4 . . . C 3 48.417 54.577 16.239 1 19.97 ? C32 FR4 1001 A 1 HETATM 21 C C33 FR4 . . . C 3 49.015 54.072 17.408 1 20.22 ? C33 FR4 1001 A 1 HETATM 22 C C34 FR4 . . . C 3 49.257 54.93 18.484 1 18.83 ? C34 FR4 1001 A 1 HETATM 23 N N1 FR4 . . . C 3 49.396 52.774 17.544 1 20.54 ? N1 FR4 1001 A 1 HETATM 24 C C2 FR4 . . . C 3 49.161 51.771 16.663 1 21.65 ? C2 FR4 1001 A 1 HETATM 25 O O1 FR4 . . . C 3 48.525 51.86 15.613 1 21.65 ? O1 FR4 1001 A 1 HETATM 26 C C4 FR4 . . . C 3 49.804 50.474 17.127 1 21.95 ? C4 FR4 1001 A 1 HETATM 27 C C6 FR4 . . . C 3 49.179 49.254 16.443 1 24.3 ? C6 FR4 1001 A 1 HETATM 28 C C7 FR4 . . . C 3 47.584 48.919 18.382 1 28.5 ? C7 FR4 1001 A 1 HETATM 29 C C11 FR4 . . . C 3 47.819 48.889 17.008 1 28.1 ? C11 FR4 1001 A 1 HETATM 30 C C9 FR4 . . . C 3 46.809 48.476 16.142 1 29.82 ? C9 FR4 1001 A 1 HETATM 31 C C12 FR4 . . . C 3 45.58 48.076 16.646 1 29.12 ? C12 FR4 1001 A 1 HETATM 32 C C10 FR4 . . . C 3 45.356 48.077 18.023 1 28.78 ? C10 FR4 1001 A 1 HETATM 33 C C15 FR4 . . . C 3 46.355 48.503 18.886 1 28.26 ? C15 FR4 1001 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 33 #