data_1UTZ # _model_server_result.job_id ZHiUrgLgwwpFQeg17IwV2Q _model_server_result.datetime_utc '2024-10-11 01:25:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1utz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1269}' # _entry.id 1UTZ # _exptl.entry_id 1UTZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1UTZ _cell.length_a 123.224 _cell.length_b 123.224 _cell.length_c 168.2 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UTZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 61.612 106.715114 0 3 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 123.224 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 N N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 19 A ASP 124 1_555 I CA CA . A CA 1271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.122 ? metalc ? metalc2 A OD1 ASP 19 A ASP 124 1_555 I CA CA . A CA 1271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc3 A NE2 HIS 63 A HIS 168 1_555 G ZN ZN . A ZN 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc4 A OD2 ASP 65 A ASP 170 1_555 G ZN ZN . A ZN 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.854 ? metalc ? metalc5 A OD2 ASP 70 A ASP 175 1_555 H CA CA . A CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc6 A O GLY 71 A GLY 176 1_555 H CA CA . A CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc7 A O GLY 73 A GLY 178 1_555 H CA CA . A CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc8 A O ILE 75 A ILE 180 1_555 H CA CA . A CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc9 A NE2 HIS 78 A HIS 183 1_555 G ZN ZN . A ZN 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc10 A ND1 HIS 91 A HIS 196 1_555 G ZN ZN . A ZN 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc11 A OD1 ASP 93 A ASP 198 1_555 H CA CA . A CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc12 A OE2 GLU 94 A GLU 199 1_555 I CA CA . A CA 1271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc13 A O GLU 94 A GLU 199 1_555 I CA CA . A CA 1271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc14 A OE2 GLU 96 A GLU 201 1_555 H CA CA . A CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc15 A O GLU 96 A GLU 201 1_555 I CA CA . A CA 1271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc16 A NE2 HIS 113 A HIS 218 1_555 F ZN ZN . A ZN 1268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc17 A NE2 HIS 117 A HIS 222 1_555 F ZN ZN . A ZN 1268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc18 A NE2 HIS 123 A HIS 228 1_555 F ZN ZN . A ZN 1268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc19 E O2 HAE . A HAE 1267 1_555 F ZN ZN . A ZN 1268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc20 E O HAE . A HAE 1267 1_555 F ZN ZN . A ZN 1268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc21 B OD1 ASP 19 B ASP 124 1_555 O CA CA . B CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc22 B OD2 ASP 19 B ASP 124 1_555 O CA CA . B CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.995 ? metalc ? metalc23 B NE2 HIS 63 B HIS 168 1_555 M ZN ZN . B ZN 1268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc24 B OD2 ASP 65 B ASP 170 1_555 M ZN ZN . B ZN 1268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? metalc ? metalc25 B OD2 ASP 70 B ASP 175 1_555 N CA CA . B CA 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc26 B O GLY 71 B GLY 176 1_555 N CA CA . B CA 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc27 B O GLY 73 B GLY 178 1_555 N CA CA . B CA 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc28 B O ILE 75 B ILE 180 1_555 N CA CA . B CA 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc29 B NE2 HIS 78 B HIS 183 1_555 M ZN ZN . B ZN 1268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc30 B ND1 HIS 91 B HIS 196 1_555 M ZN ZN . B ZN 1268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? metalc ? metalc31 B OD1 ASP 93 B ASP 198 1_555 N CA CA . B CA 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc32 B OE2 GLU 94 B GLU 199 1_555 O CA CA . B CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc33 B O GLU 94 B GLU 199 1_555 O CA CA . B CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc34 B OE2 GLU 96 B GLU 201 1_555 N CA CA . B CA 1269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc35 B O GLU 96 B GLU 201 1_555 O CA CA . B CA 1270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc36 B NE2 HIS 113 B HIS 218 1_555 L ZN ZN . B ZN 1267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc37 B NE2 HIS 117 B HIS 222 1_555 L ZN ZN . B ZN 1267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc38 B NE2 HIS 123 B HIS 228 1_555 L ZN ZN . B ZN 1267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc39 K O HAE . B HAE 1266 1_555 L ZN ZN . B ZN 1267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc40 K O2 HAE . B HAE 1266 1_555 L ZN ZN . B ZN 1267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1UTZ _atom_sites.fract_transf_matrix[1][1] 0.008115 _atom_sites.fract_transf_matrix[1][2] 0.004685 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009371 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005945 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PF3 A 1 1265 1265 PF3 PF3 . D 2 PF3 A 1 1266 1266 PF3 PF3 . E 3 HAE A 1 1267 1267 HAE HAE . F 4 ZN A 1 1268 1268 ZN ZN . G 4 ZN A 1 1269 1269 ZN ZN . H 5 CA A 1 1270 1270 CA CA . I 5 CA A 1 1271 1271 CA CA . J 2 PF3 B 1 1265 1265 PF3 PF3 . K 3 HAE B 1 1266 1266 HAE HAE . L 4 ZN B 1 1267 1267 ZN ZN . M 4 ZN B 1 1268 1268 ZN ZN . N 5 CA B 1 1269 1269 CA CA . O 5 CA B 1 1270 1270 CA CA . P 6 HOH A 1 2001 2001 HOH HOH . P 6 HOH A 2 2002 2002 HOH HOH . P 6 HOH A 3 2003 2003 HOH HOH . P 6 HOH A 4 2004 2004 HOH HOH . P 6 HOH A 5 2005 2005 HOH HOH . P 6 HOH A 6 2006 2006 HOH HOH . P 6 HOH A 7 2007 2007 HOH HOH . P 6 HOH A 8 2008 2008 HOH HOH . P 6 HOH A 9 2009 2009 HOH HOH . P 6 HOH A 10 2010 2010 HOH HOH . P 6 HOH A 11 2011 2011 HOH HOH . P 6 HOH A 12 2012 2012 HOH HOH . P 6 HOH A 13 2013 2013 HOH HOH . P 6 HOH A 14 2014 2014 HOH HOH . P 6 HOH A 15 2015 2015 HOH HOH . P 6 HOH A 16 2016 2016 HOH HOH . P 6 HOH A 17 2017 2017 HOH HOH . P 6 HOH A 18 2018 2018 HOH HOH . P 6 HOH A 19 2019 2019 HOH HOH . P 6 HOH A 20 2020 2020 HOH HOH . P 6 HOH A 21 2021 2021 HOH HOH . P 6 HOH A 22 2022 2022 HOH HOH . P 6 HOH A 23 2023 2023 HOH HOH . P 6 HOH A 24 2024 2024 HOH HOH . P 6 HOH A 25 2025 2025 HOH HOH . P 6 HOH A 26 2026 2026 HOH HOH . P 6 HOH A 27 2027 2027 HOH HOH . P 6 HOH A 28 2028 2028 HOH HOH . P 6 HOH A 29 2029 2029 HOH HOH . P 6 HOH A 30 2030 2030 HOH HOH . P 6 HOH A 31 2031 2031 HOH HOH . P 6 HOH A 32 2032 2032 HOH HOH . P 6 HOH A 33 2033 2033 HOH HOH . P 6 HOH A 34 2034 2034 HOH HOH . P 6 HOH A 35 2035 2035 HOH HOH . P 6 HOH A 36 2036 2036 HOH HOH . P 6 HOH A 37 2037 2037 HOH HOH . P 6 HOH A 38 2038 2038 HOH HOH . P 6 HOH A 39 2039 2039 HOH HOH . P 6 HOH A 40 2040 2040 HOH HOH . P 6 HOH A 41 2041 2041 HOH HOH . P 6 HOH A 42 2042 2042 HOH HOH . P 6 HOH A 43 2043 2043 HOH HOH . P 6 HOH A 44 2044 2044 HOH HOH . P 6 HOH A 45 2045 2045 HOH HOH . P 6 HOH A 46 2046 2046 HOH HOH . P 6 HOH A 47 2047 2047 HOH HOH . P 6 HOH A 48 2048 2048 HOH HOH . P 6 HOH A 49 2049 2049 HOH HOH . P 6 HOH A 50 2050 2050 HOH HOH . P 6 HOH A 51 2051 2051 HOH HOH . P 6 HOH A 52 2052 2052 HOH HOH . P 6 HOH A 53 2053 2053 HOH HOH . P 6 HOH A 54 2054 2054 HOH HOH . P 6 HOH A 55 2055 2055 HOH HOH . P 6 HOH A 56 2056 2056 HOH HOH . P 6 HOH A 57 2057 2057 HOH HOH . P 6 HOH A 58 2058 2058 HOH HOH . P 6 HOH A 59 2059 2059 HOH HOH . P 6 HOH A 60 2060 2060 HOH HOH . P 6 HOH A 61 2061 2061 HOH HOH . P 6 HOH A 62 2062 2062 HOH HOH . P 6 HOH A 63 2063 2063 HOH HOH . P 6 HOH A 64 2064 2064 HOH HOH . P 6 HOH A 65 2065 2065 HOH HOH . P 6 HOH A 66 2066 2066 HOH HOH . P 6 HOH A 67 2067 2067 HOH HOH . P 6 HOH A 68 2068 2068 HOH HOH . P 6 HOH A 69 2069 2069 HOH HOH . P 6 HOH A 70 2070 2070 HOH HOH . P 6 HOH A 71 2071 2071 HOH HOH . P 6 HOH A 72 2072 2072 HOH HOH . Q 6 HOH B 1 2001 2001 HOH HOH . Q 6 HOH B 2 2002 2002 HOH HOH . Q 6 HOH B 3 2003 2003 HOH HOH . Q 6 HOH B 4 2004 2004 HOH HOH . Q 6 HOH B 5 2005 2005 HOH HOH . Q 6 HOH B 6 2006 2006 HOH HOH . Q 6 HOH B 7 2007 2007 HOH HOH . Q 6 HOH B 8 2008 2008 HOH HOH . Q 6 HOH B 9 2009 2009 HOH HOH . Q 6 HOH B 10 2010 2010 HOH HOH . Q 6 HOH B 11 2011 2011 HOH HOH . Q 6 HOH B 12 2012 2012 HOH HOH . Q 6 HOH B 13 2013 2013 HOH HOH . Q 6 HOH B 14 2014 2014 HOH HOH . Q 6 HOH B 15 2015 2015 HOH HOH . Q 6 HOH B 16 2016 2016 HOH HOH . Q 6 HOH B 17 2017 2017 HOH HOH . Q 6 HOH B 18 2018 2018 HOH HOH . Q 6 HOH B 19 2019 2019 HOH HOH . Q 6 HOH B 20 2020 2020 HOH HOH . Q 6 HOH B 21 2021 2021 HOH HOH . Q 6 HOH B 22 2022 2022 HOH HOH . Q 6 HOH B 23 2023 2023 HOH HOH . Q 6 HOH B 24 2024 2024 HOH HOH . Q 6 HOH B 25 2025 2025 HOH HOH . Q 6 HOH B 26 2026 2026 HOH HOH . Q 6 HOH B 27 2027 2027 HOH HOH . Q 6 HOH B 28 2028 2028 HOH HOH . Q 6 HOH B 29 2029 2029 HOH HOH . Q 6 HOH B 30 2030 2030 HOH HOH . Q 6 HOH B 31 2031 2031 HOH HOH . Q 6 HOH B 32 2032 2032 HOH HOH . Q 6 HOH B 33 2033 2033 HOH HOH . Q 6 HOH B 34 2034 2034 HOH HOH . Q 6 HOH B 35 2035 2035 HOH HOH . Q 6 HOH B 36 2036 2036 HOH HOH . Q 6 HOH B 37 2037 2037 HOH HOH . Q 6 HOH B 38 2038 2038 HOH HOH . Q 6 HOH B 39 2039 2039 HOH HOH . Q 6 HOH B 40 2040 2040 HOH HOH . Q 6 HOH B 41 2041 2041 HOH HOH . Q 6 HOH B 42 2042 2042 HOH HOH . Q 6 HOH B 43 2043 2043 HOH HOH . Q 6 HOH B 44 2044 2044 HOH HOH . Q 6 HOH B 45 2045 2045 HOH HOH . Q 6 HOH B 46 2046 2046 HOH HOH . Q 6 HOH B 47 2047 2047 HOH HOH . Q 6 HOH B 48 2048 2048 HOH HOH . Q 6 HOH B 49 2049 2049 HOH HOH . Q 6 HOH B 50 2050 2050 HOH HOH . Q 6 HOH B 51 2051 2051 HOH HOH . Q 6 HOH B 52 2052 2052 HOH HOH . Q 6 HOH B 53 2053 2053 HOH HOH . Q 6 HOH B 54 2054 2054 HOH HOH . Q 6 HOH B 55 2055 2055 HOH HOH . Q 6 HOH B 56 2056 2056 HOH HOH . Q 6 HOH B 57 2057 2057 HOH HOH . Q 6 HOH B 58 2058 2058 HOH HOH . Q 6 HOH B 59 2059 2059 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 5 _atom_site.Cartn_x 34.883 _atom_site.Cartn_y 47.099 _atom_site.Cartn_z 0.983 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1269 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #