data_1UUM # _model_server_result.job_id 5RIDijEk4bKDxFnCrXO2Dw _model_server_result.datetime_utc '2024-11-25 19:33:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1uum # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":401}' # _entry.id 1UUM # _exptl.entry_id 1UUM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 5 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'octyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1UUM _cell.length_a 133.15 _cell.length_b 133.15 _cell.length_c 50.13 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UUM _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 J N N # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BOG _chem_comp.mon_nstd_flag n _chem_comp.name 'octyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BOG sing 118 n n C1 C2 BOG sing 119 n n C1 O5 BOG sing 120 n n C1 H1 BOG sing 121 n n O1 C1' BOG sing 122 n n C2 O2 BOG sing 123 n n C2 C3 BOG sing 124 n n C2 H2 BOG sing 125 n n O2 HO2 BOG sing 126 n n C3 O3 BOG sing 127 n n C3 C4 BOG sing 128 n n C3 H3 BOG sing 129 n n O3 HO3 BOG sing 130 n n C4 O4 BOG sing 131 n n C4 C5 BOG sing 132 n n C4 H4 BOG sing 133 n n O4 HO4 BOG sing 134 n n C5 O5 BOG sing 135 n n C5 C6 BOG sing 136 n n C5 H5 BOG sing 137 n n C6 O6 BOG sing 138 n n C6 H61 BOG sing 139 n n C6 H62 BOG sing 140 n n O6 HO6 BOG sing 141 n n C1' C2' BOG sing 142 n n C1' "H1'1" BOG sing 143 n n C1' "H1'2" BOG sing 144 n n C2' C3' BOG sing 145 n n C2' "H2'1" BOG sing 146 n n C2' "H2'2" BOG sing 147 n n C3' C4' BOG sing 148 n n C3' "H3'1" BOG sing 149 n n C3' "H3'2" BOG sing 150 n n C4' C5' BOG sing 151 n n C4' "H4'1" BOG sing 152 n n C4' "H4'2" BOG sing 153 n n C5' C6' BOG sing 154 n n C5' "H5'1" BOG sing 155 n n C5' "H5'2" BOG sing 156 n n C6' C7' BOG sing 157 n n C6' "H6'1" BOG sing 158 n n C6' "H6'2" BOG sing 159 n n C7' C8' BOG sing 160 n n C7' "H7'1" BOG sing 161 n n C7' "H7'2" BOG sing 162 n n C8' "H8'1" BOG sing 163 n n C8' "H8'2" BOG sing 164 n n C8' "H8'3" BOG sing 165 n n # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.identifier b-octylglucoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 1UUM _atom_sites.fract_transf_matrix[1][1] 0.00751 _atom_sites.fract_transf_matrix[1][2] 0.004336 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008672 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019948 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 398 398 FMN FMN . D 3 ORO A 1 399 399 ORO ORO . E 4 AFI A 1 400 400 AFI AFI . F 5 BOG A 1 401 401 BOG BOG . G 2 FMN B 1 398 398 FMN FMN . H 3 ORO B 1 399 399 ORO ORO . I 4 AFI B 1 400 400 AFI AFI . J 5 BOG B 1 401 401 BOG BOG . K 6 HOH A 1 2001 2001 HOH HOH . K 6 HOH A 2 2002 2002 HOH HOH . K 6 HOH A 3 2003 2003 HOH HOH . K 6 HOH A 4 2004 2004 HOH HOH . K 6 HOH A 5 2005 2005 HOH HOH . K 6 HOH A 6 2006 2006 HOH HOH . K 6 HOH A 7 2007 2007 HOH HOH . K 6 HOH A 8 2008 2008 HOH HOH . K 6 HOH A 9 2009 2009 HOH HOH . K 6 HOH A 10 2010 2010 HOH HOH . K 6 HOH A 11 2011 2011 HOH HOH . K 6 HOH A 12 2012 2012 HOH HOH . K 6 HOH A 13 2013 2013 HOH HOH . K 6 HOH A 14 2014 2014 HOH HOH . K 6 HOH A 15 2015 2015 HOH HOH . K 6 HOH A 16 2016 2016 HOH HOH . K 6 HOH A 17 2017 2017 HOH HOH . K 6 HOH A 18 2018 2018 HOH HOH . K 6 HOH A 19 2019 2019 HOH HOH . K 6 HOH A 20 2020 2020 HOH HOH . K 6 HOH A 21 2021 2021 HOH HOH . K 6 HOH A 22 2022 2022 HOH HOH . K 6 HOH A 23 2023 2023 HOH HOH . K 6 HOH A 24 2024 2024 HOH HOH . K 6 HOH A 25 2025 2025 HOH HOH . K 6 HOH A 26 2026 2026 HOH HOH . K 6 HOH A 27 2027 2027 HOH HOH . K 6 HOH A 28 2028 2028 HOH HOH . K 6 HOH A 29 2029 2029 HOH HOH . K 6 HOH A 30 2030 2030 HOH HOH . K 6 HOH A 31 2031 2031 HOH HOH . K 6 HOH A 32 2032 2032 HOH HOH . K 6 HOH A 33 2033 2033 HOH HOH . K 6 HOH A 34 2034 2034 HOH HOH . K 6 HOH A 35 2035 2035 HOH HOH . K 6 HOH A 36 2036 2036 HOH HOH . K 6 HOH A 37 2037 2037 HOH HOH . K 6 HOH A 38 2038 2038 HOH HOH . K 6 HOH A 39 2039 2039 HOH HOH . K 6 HOH A 40 2040 2040 HOH HOH . K 6 HOH A 41 2041 2041 HOH HOH . K 6 HOH A 42 2042 2042 HOH HOH . K 6 HOH A 43 2043 2043 HOH HOH . K 6 HOH A 44 2044 2044 HOH HOH . K 6 HOH A 45 2045 2045 HOH HOH . K 6 HOH A 46 2046 2046 HOH HOH . K 6 HOH A 47 2047 2047 HOH HOH . K 6 HOH A 48 2048 2048 HOH HOH . K 6 HOH A 49 2049 2049 HOH HOH . K 6 HOH A 50 2050 2050 HOH HOH . K 6 HOH A 51 2051 2051 HOH HOH . K 6 HOH A 52 2052 2052 HOH HOH . K 6 HOH A 53 2053 2053 HOH HOH . K 6 HOH A 54 2054 2054 HOH HOH . K 6 HOH A 55 2055 2055 HOH HOH . K 6 HOH A 56 2056 2056 HOH HOH . K 6 HOH A 57 2057 2057 HOH HOH . K 6 HOH A 58 2058 2058 HOH HOH . K 6 HOH A 59 2059 2059 HOH HOH . K 6 HOH A 60 2060 2060 HOH HOH . K 6 HOH A 61 2061 2061 HOH HOH . K 6 HOH A 62 2062 2062 HOH HOH . K 6 HOH A 63 2063 2063 HOH HOH . K 6 HOH A 64 2064 2064 HOH HOH . K 6 HOH A 65 2065 2065 HOH HOH . K 6 HOH A 66 2066 2066 HOH HOH . K 6 HOH A 67 2067 2067 HOH HOH . K 6 HOH A 68 2068 2068 HOH HOH . K 6 HOH A 69 2069 2069 HOH HOH . K 6 HOH A 70 2070 2070 HOH HOH . K 6 HOH A 71 2071 2071 HOH HOH . K 6 HOH A 72 2072 2072 HOH HOH . K 6 HOH A 73 2073 2073 HOH HOH . K 6 HOH A 74 2074 2074 HOH HOH . K 6 HOH A 75 2075 2075 HOH HOH . K 6 HOH A 76 2076 2076 HOH HOH . K 6 HOH A 77 2077 2077 HOH HOH . K 6 HOH A 78 2078 2078 HOH HOH . K 6 HOH A 79 2079 2079 HOH HOH . K 6 HOH A 80 2080 2080 HOH HOH . K 6 HOH A 81 2081 2081 HOH HOH . K 6 HOH A 82 2082 2082 HOH HOH . K 6 HOH A 83 2083 2083 HOH HOH . K 6 HOH A 84 2084 2084 HOH HOH . K 6 HOH A 85 2085 2085 HOH HOH . K 6 HOH A 86 2086 2086 HOH HOH . K 6 HOH A 87 2087 2087 HOH HOH . K 6 HOH A 88 2088 2088 HOH HOH . K 6 HOH A 89 2089 2089 HOH HOH . K 6 HOH A 90 2090 2090 HOH HOH . K 6 HOH A 91 2091 2091 HOH HOH . K 6 HOH A 92 2092 2092 HOH HOH . K 6 HOH A 93 2093 2093 HOH HOH . K 6 HOH A 94 2094 2094 HOH HOH . K 6 HOH A 95 2095 2095 HOH HOH . K 6 HOH A 96 2096 2096 HOH HOH . K 6 HOH A 97 2097 2097 HOH HOH . K 6 HOH A 98 2098 2098 HOH HOH . K 6 HOH A 99 2099 2099 HOH HOH . L 6 HOH B 1 2001 2001 HOH HOH . L 6 HOH B 2 2002 2002 HOH HOH . L 6 HOH B 3 2003 2003 HOH HOH . L 6 HOH B 4 2004 2004 HOH HOH . L 6 HOH B 5 2005 2005 HOH HOH . L 6 HOH B 6 2006 2006 HOH HOH . L 6 HOH B 7 2007 2007 HOH HOH . L 6 HOH B 8 2008 2008 HOH HOH . L 6 HOH B 9 2009 2009 HOH HOH . L 6 HOH B 10 2010 2010 HOH HOH . L 6 HOH B 11 2011 2011 HOH HOH . L 6 HOH B 12 2012 2012 HOH HOH . L 6 HOH B 13 2013 2013 HOH HOH . L 6 HOH B 14 2014 2014 HOH HOH . L 6 HOH B 15 2015 2015 HOH HOH . L 6 HOH B 16 2016 2016 HOH HOH . L 6 HOH B 17 2017 2017 HOH HOH . L 6 HOH B 18 2018 2018 HOH HOH . L 6 HOH B 19 2019 2019 HOH HOH . L 6 HOH B 20 2020 2020 HOH HOH . L 6 HOH B 21 2021 2021 HOH HOH . L 6 HOH B 22 2022 2022 HOH HOH . L 6 HOH B 23 2023 2023 HOH HOH . L 6 HOH B 24 2024 2024 HOH HOH . L 6 HOH B 25 2025 2025 HOH HOH . L 6 HOH B 26 2026 2026 HOH HOH . L 6 HOH B 27 2027 2027 HOH HOH . L 6 HOH B 28 2028 2028 HOH HOH . L 6 HOH B 29 2029 2029 HOH HOH . L 6 HOH B 30 2030 2030 HOH HOH . L 6 HOH B 31 2031 2031 HOH HOH . L 6 HOH B 32 2032 2032 HOH HOH . L 6 HOH B 33 2033 2033 HOH HOH . L 6 HOH B 34 2034 2034 HOH HOH . L 6 HOH B 35 2035 2035 HOH HOH . L 6 HOH B 36 2036 2036 HOH HOH . L 6 HOH B 37 2037 2037 HOH HOH . L 6 HOH B 38 2038 2038 HOH HOH . L 6 HOH B 39 2039 2039 HOH HOH . L 6 HOH B 40 2040 2040 HOH HOH . L 6 HOH B 41 2041 2041 HOH HOH . L 6 HOH B 42 2042 2042 HOH HOH . L 6 HOH B 43 2043 2043 HOH HOH . L 6 HOH B 44 2044 2044 HOH HOH . L 6 HOH B 45 2045 2045 HOH HOH . L 6 HOH B 46 2046 2046 HOH HOH . L 6 HOH B 47 2047 2047 HOH HOH . L 6 HOH B 48 2048 2048 HOH HOH . L 6 HOH B 49 2049 2049 HOH HOH . L 6 HOH B 50 2050 2050 HOH HOH . L 6 HOH B 51 2051 2051 HOH HOH . L 6 HOH B 52 2052 2052 HOH HOH . L 6 HOH B 53 2053 2053 HOH HOH . L 6 HOH B 54 2054 2054 HOH HOH . L 6 HOH B 55 2055 2055 HOH HOH . L 6 HOH B 56 2056 2056 HOH HOH . L 6 HOH B 57 2057 2057 HOH HOH . L 6 HOH B 58 2058 2058 HOH HOH . L 6 HOH B 59 2059 2059 HOH HOH . L 6 HOH B 60 2060 2060 HOH HOH . L 6 HOH B 61 2061 2061 HOH HOH . L 6 HOH B 62 2062 2062 HOH HOH . L 6 HOH B 63 2063 2063 HOH HOH . L 6 HOH B 64 2064 2064 HOH HOH . L 6 HOH B 65 2065 2065 HOH HOH . L 6 HOH B 66 2066 2066 HOH HOH . L 6 HOH B 67 2067 2067 HOH HOH . L 6 HOH B 68 2068 2068 HOH HOH . L 6 HOH B 69 2069 2069 HOH HOH . L 6 HOH B 70 2070 2070 HOH HOH . L 6 HOH B 71 2071 2071 HOH HOH . L 6 HOH B 72 2072 2072 HOH HOH . L 6 HOH B 73 2073 2073 HOH HOH . L 6 HOH B 74 2074 2074 HOH HOH . L 6 HOH B 75 2075 2075 HOH HOH . L 6 HOH B 76 2076 2076 HOH HOH . L 6 HOH B 77 2077 2077 HOH HOH . L 6 HOH B 78 2078 2078 HOH HOH . L 6 HOH B 79 2079 2079 HOH HOH . L 6 HOH B 80 2080 2080 HOH HOH . L 6 HOH B 81 2081 2081 HOH HOH . L 6 HOH B 82 2082 2082 HOH HOH . L 6 HOH B 83 2083 2083 HOH HOH . L 6 HOH B 84 2084 2084 HOH HOH . L 6 HOH B 85 2085 2085 HOH HOH . L 6 HOH B 86 2086 2086 HOH HOH . L 6 HOH B 87 2087 2087 HOH HOH . L 6 HOH B 88 2088 2088 HOH HOH . L 6 HOH B 89 2089 2089 HOH HOH . L 6 HOH B 90 2090 2090 HOH HOH . L 6 HOH B 91 2091 2091 HOH HOH . L 6 HOH B 92 2092 2092 HOH HOH . L 6 HOH B 93 2093 2093 HOH HOH . L 6 HOH B 94 2094 2094 HOH HOH . L 6 HOH B 95 2095 2095 HOH HOH . L 6 HOH B 96 2096 2096 HOH HOH . L 6 HOH B 97 2097 2097 HOH HOH . L 6 HOH B 98 2098 2098 HOH HOH . L 6 HOH B 99 2099 2099 HOH HOH . L 6 HOH B 100 2100 2100 HOH HOH . L 6 HOH B 101 2101 2101 HOH HOH . L 6 HOH B 102 2102 2102 HOH HOH . L 6 HOH B 103 2103 2103 HOH HOH . L 6 HOH B 104 2104 2104 HOH HOH . L 6 HOH B 105 2105 2105 HOH HOH . L 6 HOH B 106 2106 2106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BOG . . . J 5 131.127 79.269 58.587 1 62.49 ? C1 BOG 401 B 1 HETATM 2 O O1 BOG . . . J 5 131.495 78.666 59.837 1 61.6 ? O1 BOG 401 B 1 HETATM 3 C C2 BOG . . . J 5 132.094 78.787 57.495 1 63.32 ? C2 BOG 401 B 1 HETATM 4 O O2 BOG . . . J 5 133.43 79.154 57.87 1 63.97 ? O2 BOG 401 B 1 HETATM 5 C C3 BOG . . . J 5 131.705 79.419 56.127 1 63.96 ? C3 BOG 401 B 1 HETATM 6 O O3 BOG . . . J 5 132.611 78.972 55.111 1 64.65 ? O3 BOG 401 B 1 HETATM 7 C C4 BOG . . . J 5 130.261 78.997 55.779 1 62.97 ? C4 BOG 401 B 1 HETATM 8 O O4 BOG . . . J 5 129.877 79.556 54.508 1 61.85 ? O4 BOG 401 B 1 HETATM 9 C C5 BOG . . . J 5 129.311 79.508 56.91 1 62.37 ? C5 BOG 401 B 1 HETATM 10 O O5 BOG . . . J 5 129.743 78.914 58.194 1 62.19 ? O5 BOG 401 B 1 HETATM 11 C C6 BOG . . . J 5 127.878 79.106 56.633 1 62.1 ? C6 BOG 401 B 1 HETATM 12 O O6 BOG . . . J 5 127.173 78.976 57.885 1 61.39 ? O6 BOG 401 B 1 HETATM 13 C C1' BOG . . . J 5 130.649 79.052 60.947 1 59.55 ? C1' BOG 401 B 1 HETATM 14 C C2' BOG . . . J 5 131.225 78.351 62.161 1 58.41 ? C2' BOG 401 B 1 HETATM 15 C C3' BOG . . . J 5 130.51 78.847 63.413 1 55.62 ? C3' BOG 401 B 1 HETATM 16 C C4' BOG . . . J 5 131.054 78.155 64.628 1 55.23 ? C4' BOG 401 B 1 HETATM 17 C C5' BOG . . . J 5 130.399 78.584 65.915 1 54.44 ? C5' BOG 401 B 1 HETATM 18 C C6' BOG . . . J 5 131.198 78.02 67.079 1 55.71 ? C6' BOG 401 B 1 HETATM 19 C C7' BOG . . . J 5 130.615 78.402 68.418 1 57.06 ? C7' BOG 401 B 1 HETATM 20 C C8' BOG . . . J 5 131.462 77.805 69.53 1 57.09 ? C8' BOG 401 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 20 #