data_1UVU # _model_server_result.job_id k60CYL-yKyDsHwcsxIKozA _model_server_result.datetime_utc '2024-11-22 04:18:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1uvu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 1UVU # _exptl.entry_id 1UVU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 433.543 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(7-DIAMINOMETHYL-NAPHTHALEN-2-YL)-PROPIONIC ACID ETHYL ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1UVU _cell.length_a 87.04 _cell.length_b 87.04 _cell.length_c 103.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UVU _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C26 H31 N3 O3' _chem_comp.formula_weight 433.543 _chem_comp.id DCH _chem_comp.mon_nstd_flag . _chem_comp.name '3-(7-DIAMINOMETHYL-NAPHTHALEN-2-YL)-PROPIONIC ACID ETHYL ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CZ NZ1 DCH sing 83 n n CZ NZ2 DCH sing 84 n n CZ C11 DCH sing 85 n n CZ HZ DCH sing 86 n n NZ1 HZ11 DCH sing 87 n n NZ1 HZ12 DCH sing 88 n n NZ2 HZ21 DCH sing 89 n n NZ2 HZ22 DCH sing 90 n n C11 C12 DCH doub 91 n y C11 C1A DCH sing 92 n y C12 C13 DCH sing 93 n y C12 H12 DCH sing 94 n n C13 C14 DCH doub 95 n y C13 C18 DCH sing 96 n y C14 C15 DCH sing 97 n y C14 H14 DCH sing 98 n n C15 C16 DCH doub 99 n y C15 CA1 DCH sing 100 n n C16 C17 DCH sing 101 n y C16 H16 DCH sing 102 n n C17 C18 DCH doub 103 n y C17 H17 DCH sing 104 n n C18 C19 DCH sing 105 n y C19 C1A DCH doub 106 n y C19 H19 DCH sing 107 n n C1A H1A DCH sing 108 n n CA1 CA2 DCH sing 109 n n CA1 HA11 DCH sing 110 n n CA1 HA12 DCH sing 111 n n CA2 CA3 DCH sing 112 n n CA2 C21 DCH sing 113 n n CA2 HA2 DCH sing 114 n n CA3 OA3 DCH doub 115 n n CA3 OA4 DCH sing 116 n n OA4 CA5 DCH sing 117 n n CA5 CA6 DCH sing 118 n n CA5 HA51 DCH sing 119 n n CA5 HA52 DCH sing 120 n n CA6 HA61 DCH sing 121 n n CA6 HA62 DCH sing 122 n n CA6 HA63 DCH sing 123 n n C21 C22 DCH doub 124 n y C21 C26 DCH sing 125 n y C22 C23 DCH sing 126 n y C22 H22 DCH sing 127 n n C23 C24 DCH doub 128 n y C23 H23 DCH sing 129 n n C24 C25 DCH sing 130 n y C24 OB DCH sing 131 n n C25 C26 DCH doub 132 n y C25 H25 DCH sing 133 n n C26 H26 DCH sing 134 n n OB C31 DCH sing 135 n n C31 C32 DCH sing 136 n n C31 C35 DCH sing 137 n n C31 H31 DCH sing 138 n n C32 N33 DCH sing 139 n n C32 H321 DCH sing 140 n n C32 H322 DCH sing 141 n n N33 C34 DCH sing 142 n n N33 H33 DCH sing 143 n n C34 C35 DCH sing 144 n n C34 H341 DCH sing 145 n n C34 H342 DCH sing 146 n n C35 H351 DCH sing 147 n n C35 H352 DCH sing 148 n n # _atom_sites.entry_id 1UVU _atom_sites.fract_transf_matrix[1][1] 0.011489 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011489 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00969 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id DCH _pdbx_nonpoly_scheme.pdb_strand_id H _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id DCH _pdbx_nonpoly_scheme.auth_mon_id DCH _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CZ DCH . . . C 3 -40.513 -31.794 40.699 1 35.75 ? CZ DCH 1 H 1 HETATM 2 N NZ1 DCH . . . C 3 -41.466 -30.913 40.453 1 36.48 ? NZ1 DCH 1 H 1 HETATM 3 N NZ2 DCH . . . C 3 -40.645 -33.104 40.716 1 35.31 ? NZ2 DCH 1 H 1 HETATM 4 C C11 DCH . . . C 3 -39.195 -31.115 40.95 1 35.81 ? C11 DCH 1 H 1 HETATM 5 C C12 DCH . . . C 3 -38.337 -31.62 41.903 1 35.38 ? C12 DCH 1 H 1 HETATM 6 C C13 DCH . . . C 3 -37.125 -30.965 42.109 1 35.98 ? C13 DCH 1 H 1 HETATM 7 C C14 DCH . . . C 3 -36.289 -31.502 43.077 1 34.43 ? C14 DCH 1 H 1 HETATM 8 C C15 DCH . . . C 3 -35.05 -30.921 43.351 1 36.48 ? C15 DCH 1 H 1 HETATM 9 C C16 DCH . . . C 3 -34.668 -29.742 42.654 1 36.47 ? C16 DCH 1 H 1 HETATM 10 C C17 DCH . . . C 3 -35.51 -29.172 41.678 1 38.82 ? C17 DCH 1 H 1 HETATM 11 C C18 DCH . . . C 3 -36.745 -29.783 41.398 1 35.66 ? C18 DCH 1 H 1 HETATM 12 C C19 DCH . . . C 3 -37.596 -29.259 40.437 1 31.33 ? C19 DCH 1 H 1 HETATM 13 C C1A DCH . . . C 3 -38.812 -29.943 40.22 1 35.53 ? C1A DCH 1 H 1 HETATM 14 C CA1 DCH . . . C 3 -34.234 -31.586 44.464 1 34.89 ? CA1 DCH 1 H 1 HETATM 15 C CA2 DCH . . . C 3 -34.748 -30.995 45.82 1 33.48 ? CA2 DCH 1 H 1 HETATM 16 C CA3 DCH . . . C 3 -34.711 -29.435 45.913 1 32.46 ? CA3 DCH 1 H 1 HETATM 17 O OA3 DCH . . . C 3 -35.552 -28.883 46.622 1 30.74 ? OA3 DCH 1 H 1 HETATM 18 O OA4 DCH . . . C 3 -33.745 -28.732 45.184 1 28.63 ? OA4 DCH 1 H 1 HETATM 19 C CA5 DCH . . . C 3 -33.166 -27.469 45.741 1 28.45 ? CA5 DCH 1 H 1 HETATM 20 C CA6 DCH . . . C 3 -32.591 -26.875 44.414 1 29.9 ? CA6 DCH 1 H 1 HETATM 21 H HZ11 DCH . . . C 3 -41.278 -29.948 40.66 1 30 ? HZ11 DCH 1 H 1 HETATM 22 H HZ12 DCH . . . C 3 -42.43 -31.153 40.348 1 30 ? HZ12 DCH 1 H 1 HETATM 23 H HZ21 DCH . . . C 3 -41.292 -33.528 40.086 1 30 ? HZ21 DCH 1 H 1 HETATM 24 H HZ22 DCH . . . C 3 -39.843 -33.67 41.004 1 30 ? HZ22 DCH 1 H 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #