data_1UYM # _model_server_result.job_id ZYRuINTXw1HC7XUQrpUFrg _model_server_result.datetime_utc '2024-11-22 21:08:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1uym # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1224}' # _entry.id 1UYM # _exptl.entry_id 1UYM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 371.434 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 9-BUTYL-8-(3,4,5-TRIMETHOXYBENZYL)-9H-PURIN-6-AMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1UYM _cell.length_a 66.861 _cell.length_b 90.707 _cell.length_c 96.289 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UYM _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H25 N5 O3' _chem_comp.formula_weight 371.434 _chem_comp.id PU3 _chem_comp.mon_nstd_flag . _chem_comp.name 9-BUTYL-8-(3,4,5-TRIMETHOXYBENZYL)-9H-PURIN-6-AMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 O3 PU3 sing 264 n n C19 H191 PU3 sing 265 n n C19 H192 PU3 sing 266 n n C19 H193 PU3 sing 267 n n O3 C5 PU3 sing 268 n n C5 C6 PU3 doub 269 n y C5 C4 PU3 sing 270 n y C6 C1 PU3 sing 271 n y C6 H6 PU3 sing 272 n n C4 O1 PU3 sing 273 n n C4 C3 PU3 doub 274 n y O1 C7 PU3 sing 275 n n C7 H7C1 PU3 sing 276 n n C7 H7C2 PU3 sing 277 n n C7 H7C3 PU3 sing 278 n n C3 O2 PU3 sing 279 n n C3 C2 PU3 sing 280 n y O2 C8 PU3 sing 281 n n C8 H8C1 PU3 sing 282 n n C8 H8C2 PU3 sing 283 n n C8 H8C3 PU3 sing 284 n n C2 C1 PU3 doub 285 n y C2 H2 PU3 sing 286 n n C1 C9 PU3 sing 287 n n C9 C10 PU3 sing 288 n n C9 H9C1 PU3 sing 289 n n C9 H9C2 PU3 sing 290 n n C10 N1 PU3 doub 291 n y C10 N2 PU3 sing 292 n y N1 C11 PU3 sing 293 n y C11 C13 PU3 doub 294 n y C11 C12 PU3 sing 295 n y C13 N5 PU3 sing 296 n n C13 N3 PU3 sing 297 n y N5 H5N1 PU3 sing 298 n n N5 H5N2 PU3 sing 299 n n C12 N4 PU3 doub 300 n y C12 N2 PU3 sing 301 n y N4 C14 PU3 sing 302 n y C14 N3 PU3 doub 303 n y C14 H14 PU3 sing 304 n n N2 C15 PU3 sing 305 n n C15 C16 PU3 sing 306 n n C15 H151 PU3 sing 307 n n C15 H152 PU3 sing 308 n n C16 C17 PU3 sing 309 n n C16 H161 PU3 sing 310 n n C16 H162 PU3 sing 311 n n C17 C18 PU3 sing 312 n n C17 H171 PU3 sing 313 n n C17 H172 PU3 sing 314 n n C18 H181 PU3 sing 315 n n C18 H182 PU3 sing 316 n n C18 H183 PU3 sing 317 n n # _atom_sites.entry_id 1UYM _atom_sites.fract_transf_matrix[1][1] 0.014956 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011024 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010385 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PU3 A 1 1224 1224 PU3 PU3 . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . C 3 HOH A 61 2061 2061 HOH HOH . C 3 HOH A 62 2062 2062 HOH HOH . C 3 HOH A 63 2063 2063 HOH HOH . C 3 HOH A 64 2064 2064 HOH HOH . C 3 HOH A 65 2065 2065 HOH HOH . C 3 HOH A 66 2066 2066 HOH HOH . C 3 HOH A 67 2067 2067 HOH HOH . C 3 HOH A 68 2068 2068 HOH HOH . C 3 HOH A 69 2069 2069 HOH HOH . C 3 HOH A 70 2070 2070 HOH HOH . C 3 HOH A 71 2071 2071 HOH HOH . C 3 HOH A 72 2072 2072 HOH HOH . C 3 HOH A 73 2073 2073 HOH HOH . C 3 HOH A 74 2074 2074 HOH HOH . C 3 HOH A 75 2075 2075 HOH HOH . C 3 HOH A 76 2076 2076 HOH HOH . C 3 HOH A 77 2077 2077 HOH HOH . C 3 HOH A 78 2078 2078 HOH HOH . C 3 HOH A 79 2079 2079 HOH HOH . C 3 HOH A 80 2080 2080 HOH HOH . C 3 HOH A 81 2081 2081 HOH HOH . C 3 HOH A 82 2082 2082 HOH HOH . C 3 HOH A 83 2083 2083 HOH HOH . C 3 HOH A 84 2084 2084 HOH HOH . C 3 HOH A 85 2085 2085 HOH HOH . C 3 HOH A 86 2086 2086 HOH HOH . C 3 HOH A 87 2087 2087 HOH HOH . C 3 HOH A 88 2088 2088 HOH HOH . C 3 HOH A 89 2089 2089 HOH HOH . C 3 HOH A 90 2090 2090 HOH HOH . C 3 HOH A 91 2091 2091 HOH HOH . C 3 HOH A 92 2092 2092 HOH HOH . C 3 HOH A 93 2093 2093 HOH HOH . C 3 HOH A 94 2094 2094 HOH HOH . C 3 HOH A 95 2095 2095 HOH HOH . C 3 HOH A 96 2096 2096 HOH HOH . C 3 HOH A 97 2097 2097 HOH HOH . C 3 HOH A 98 2098 2098 HOH HOH . C 3 HOH A 99 2099 2099 HOH HOH . C 3 HOH A 100 2100 2100 HOH HOH . C 3 HOH A 101 2101 2101 HOH HOH . C 3 HOH A 102 2102 2102 HOH HOH . C 3 HOH A 103 2103 2103 HOH HOH . C 3 HOH A 104 2104 2104 HOH HOH . C 3 HOH A 105 2105 2105 HOH HOH . C 3 HOH A 106 2106 2106 HOH HOH . C 3 HOH A 107 2107 2107 HOH HOH . C 3 HOH A 108 2108 2108 HOH HOH . C 3 HOH A 109 2109 2109 HOH HOH . C 3 HOH A 110 2110 2110 HOH HOH . C 3 HOH A 111 2111 2111 HOH HOH . C 3 HOH A 112 2112 2112 HOH HOH . C 3 HOH A 113 2113 2113 HOH HOH . C 3 HOH A 114 2114 2114 HOH HOH . C 3 HOH A 115 2115 2115 HOH HOH . C 3 HOH A 116 2116 2116 HOH HOH . C 3 HOH A 117 2117 2117 HOH HOH . C 3 HOH A 118 2118 2118 HOH HOH . C 3 HOH A 119 2119 2119 HOH HOH . C 3 HOH A 120 2120 2120 HOH HOH . C 3 HOH A 121 2121 2121 HOH HOH . C 3 HOH A 122 2122 2122 HOH HOH . C 3 HOH A 123 2123 2123 HOH HOH . C 3 HOH A 124 2124 2124 HOH HOH . C 3 HOH A 125 2125 2125 HOH HOH . C 3 HOH A 126 2126 2126 HOH HOH . C 3 HOH A 127 2127 2127 HOH HOH . C 3 HOH A 128 2128 2128 HOH HOH . C 3 HOH A 129 2129 2129 HOH HOH . C 3 HOH A 130 2130 2130 HOH HOH . C 3 HOH A 131 2131 2131 HOH HOH . C 3 HOH A 132 2132 2132 HOH HOH . C 3 HOH A 133 2133 2133 HOH HOH . C 3 HOH A 134 2134 2134 HOH HOH . C 3 HOH A 135 2135 2135 HOH HOH . C 3 HOH A 136 2136 2136 HOH HOH . C 3 HOH A 137 2137 2137 HOH HOH . C 3 HOH A 138 2138 2138 HOH HOH . C 3 HOH A 139 2139 2139 HOH HOH . C 3 HOH A 140 2140 2140 HOH HOH . C 3 HOH A 141 2141 2141 HOH HOH . C 3 HOH A 142 2142 2142 HOH HOH . C 3 HOH A 143 2143 2143 HOH HOH . C 3 HOH A 144 2144 2144 HOH HOH . C 3 HOH A 145 2145 2145 HOH HOH . C 3 HOH A 146 2146 2146 HOH HOH . C 3 HOH A 147 2147 2147 HOH HOH . C 3 HOH A 148 2148 2148 HOH HOH . C 3 HOH A 149 2149 2149 HOH HOH . C 3 HOH A 150 2150 2150 HOH HOH . C 3 HOH A 151 2151 2151 HOH HOH . C 3 HOH A 152 2152 2152 HOH HOH . C 3 HOH A 153 2153 2153 HOH HOH . C 3 HOH A 154 2154 2154 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C19 PU3 . . . B 2 8.464 10.076 22.946 1 47.62 ? C19 PU3 1224 A 1 HETATM 2 O O3 PU3 . . . B 2 8.344 11.256 23.734 1 48.82 ? O3 PU3 1224 A 1 HETATM 3 C C5 PU3 . . . B 2 6.991 11.63 24.041 1 51.25 ? C5 PU3 1224 A 1 HETATM 4 C C6 PU3 . . . B 2 5.76 11.091 23.358 1 49.83 ? C6 PU3 1224 A 1 HETATM 5 C C4 PU3 . . . B 2 6.761 12.923 24.724 1 51.98 ? C4 PU3 1224 A 1 HETATM 6 O O1 PU3 . . . B 2 7.808 13.583 25.438 1 54.04 ? O1 PU3 1224 A 1 HETATM 7 C C7 PU3 . . . B 2 8.308 14.668 24.663 1 51.99 ? C7 PU3 1224 A 1 HETATM 8 C C3 PU3 . . . B 2 5.352 13.322 25.006 1 51.51 ? C3 PU3 1224 A 1 HETATM 9 O O2 PU3 . . . B 2 5.2 14.5 25.854 1 49.42 ? O2 PU3 1224 A 1 HETATM 10 C C8 PU3 . . . B 2 4.429 15.64 25.533 1 48.62 ? C8 PU3 1224 A 1 HETATM 11 C C2 PU3 . . . B 2 4.398 12.69 24.412 1 50.78 ? C2 PU3 1224 A 1 HETATM 12 C C1 PU3 . . . B 2 4.554 11.647 23.667 1 50.71 ? C1 PU3 1224 A 1 HETATM 13 C C9 PU3 . . . B 2 3.35 10.97 23.024 1 50.15 ? C9 PU3 1224 A 1 HETATM 14 C C10 PU3 . . . B 2 2.183 10.742 23.956 1 50.6 ? C10 PU3 1224 A 1 HETATM 15 N N1 PU3 . . . B 2 0.921 11.249 23.743 1 49.4 ? N1 PU3 1224 A 1 HETATM 16 C C11 PU3 . . . B 2 0.145 10.833 24.752 1 49.47 ? C11 PU3 1224 A 1 HETATM 17 C C13 PU3 . . . B 2 -1.266 11.007 25.164 1 50.53 ? C13 PU3 1224 A 1 HETATM 18 N N5 PU3 . . . B 2 -2.102 11.74 24.423 1 50.43 ? N5 PU3 1224 A 1 HETATM 19 C C12 PU3 . . . B 2 1.016 10.043 25.583 1 49.33 ? C12 PU3 1224 A 1 HETATM 20 N N4 PU3 . . . B 2 0.564 9.468 26.735 1 50.63 ? N4 PU3 1224 A 1 HETATM 21 C C14 PU3 . . . B 2 -0.826 9.628 27.163 1 49.16 ? C14 PU3 1224 A 1 HETATM 22 N N3 PU3 . . . B 2 -1.618 10.452 26.238 1 49.14 ? N3 PU3 1224 A 1 HETATM 23 N N2 PU3 . . . B 2 2.242 9.997 25.083 1 49.63 ? N2 PU3 1224 A 1 HETATM 24 C C15 PU3 . . . B 2 3.388 9.267 25.611 1 49.15 ? C15 PU3 1224 A 1 HETATM 25 C C16 PU3 . . . B 2 3.236 7.846 25.052 1 50.4 ? C16 PU3 1224 A 1 HETATM 26 C C17 PU3 . . . B 2 4.538 7.058 24.949 1 50.37 ? C17 PU3 1224 A 1 HETATM 27 C C18 PU3 . . . B 2 5.263 7.303 23.64 1 51.72 ? C18 PU3 1224 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #