data_1UYO # _model_server_result.job_id 7YtRefKjtO9R8qVTLa-eYQ _model_server_result.datetime_utc '2024-12-26 11:04:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1uyo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2085}' # _entry.id 1UYO # _exptl.entry_id 1UYO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 378.544 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL MONODECYL ETHER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1UYO _cell.length_a 57.43 _cell.length_b 84.893 _cell.length_c 122.983 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1UYO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 23 X ASP 799 1_555 A N MSE 24 X MSE 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C MSE 24 X MSE 800 1_555 A N GLN 25 X GLN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C LYS 64 X LYS 840 1_555 A N MSE 65 X MSE 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale4 A C MSE 65 X MSE 841 1_555 A N ARG 66 X ARG 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale5 A C GLY 89 X GLY 865 1_555 A N MSE 90 X MSE 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale6 A C MSE 90 X MSE 866 1_555 A N GLY 91 X GLY 867 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 A C LEU 154 X LEU 930 1_555 A N MSE 155 X MSE 931 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale8 A C MSE 155 X MSE 931 1_555 A N GLN 156 X GLN 932 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale9 A C ASN 261 X ASN 1037 1_555 A N MSE 262 X MSE 1038 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 A C MSE 262 X MSE 1038 1_555 A N PRO 263 X PRO 1039 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C20 H42 O6' _chem_comp.formula_weight 378.544 _chem_comp.id CXE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL MONODECYL ETHER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CXE sing 70 n n C1 H011 CXE sing 71 n n C1 H012 CXE sing 72 n n C1 H013 CXE sing 73 n n C2 C3 CXE sing 74 n n C2 H021 CXE sing 75 n n C2 H022 CXE sing 76 n n C3 C4 CXE sing 77 n n C3 H031 CXE sing 78 n n C3 H032 CXE sing 79 n n C4 C5 CXE sing 80 n n C4 H041 CXE sing 81 n n C4 H042 CXE sing 82 n n C5 C6 CXE sing 83 n n C5 H051 CXE sing 84 n n C5 H052 CXE sing 85 n n C6 C7 CXE sing 86 n n C6 H061 CXE sing 87 n n C6 H062 CXE sing 88 n n C7 C8 CXE sing 89 n n C7 H071 CXE sing 90 n n C7 H072 CXE sing 91 n n C8 C9 CXE sing 92 n n C8 H081 CXE sing 93 n n C8 H082 CXE sing 94 n n C9 C10 CXE sing 95 n n C9 H091 CXE sing 96 n n C9 H092 CXE sing 97 n n C10 O11 CXE sing 98 n n C10 H101 CXE sing 99 n n C10 H102 CXE sing 100 n n O11 C12 CXE sing 101 n n C12 C13 CXE sing 102 n n C12 H121 CXE sing 103 n n C12 H122 CXE sing 104 n n C13 O14 CXE sing 105 n n C13 H131 CXE sing 106 n n C13 H132 CXE sing 107 n n O14 C15 CXE sing 108 n n C15 C16 CXE sing 109 n n C15 H151 CXE sing 110 n n C15 H152 CXE sing 111 n n C16 O17 CXE sing 112 n n C16 H161 CXE sing 113 n n C16 H162 CXE sing 114 n n O17 C18 CXE sing 115 n n C18 C19 CXE sing 116 n n C18 H181 CXE sing 117 n n C18 H182 CXE sing 118 n n C19 O20 CXE sing 119 n n C19 H191 CXE sing 120 n n C19 H192 CXE sing 121 n n O20 C21 CXE sing 122 n n C21 C22 CXE sing 123 n n C21 H211 CXE sing 124 n n C21 H212 CXE sing 125 n n C22 O23 CXE sing 126 n n C22 H221 CXE sing 127 n n C22 H222 CXE sing 128 n n O23 C24 CXE sing 129 n n C24 C25 CXE sing 130 n n C24 H241 CXE sing 131 n n C24 H242 CXE sing 132 n n C25 O26 CXE sing 133 n n C25 H251 CXE sing 134 n n C25 H252 CXE sing 135 n n O26 H26 CXE sing 136 n n # _atom_sites.entry_id 1UYO _atom_sites.fract_transf_matrix[1][1] 0.017412 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011779 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008131 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id CXE _pdbx_nonpoly_scheme.pdb_strand_id X _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 2085 _pdbx_nonpoly_scheme.auth_seq_num 2085 _pdbx_nonpoly_scheme.pdb_mon_id CXE _pdbx_nonpoly_scheme.auth_mon_id CXE _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 CXE . . . B 2 23.854 -0.214 181.116 1 70 ? C6 CXE 2085 X 1 HETATM 2 C C7 CXE . . . B 2 25.013 -1.116 181.502 1 68.94 ? C7 CXE 2085 X 1 HETATM 3 C C8 CXE . . . B 2 24.84 -1.608 182.933 1 70.36 ? C8 CXE 2085 X 1 HETATM 4 C C9 CXE . . . B 2 26.017 -2.458 183.386 1 70.3 ? C9 CXE 2085 X 1 HETATM 5 C C10 CXE . . . B 2 26.957 -1.654 184.277 1 71.1 ? C10 CXE 2085 X 1 HETATM 6 O O11 CXE . . . B 2 27.071 -2.213 185.568 1 72.63 ? O11 CXE 2085 X 1 HETATM 7 C C12 CXE . . . B 2 27.102 -3.631 185.567 1 74.09 ? C12 CXE 2085 X 1 HETATM 8 C C13 CXE . . . B 2 28.375 -4.17 186.21 1 74.84 ? C13 CXE 2085 X 1 HETATM 9 O O14 CXE . . . B 2 28.051 -4.93 187.359 1 76.23 ? O14 CXE 2085 X 1 HETATM 10 C C15 CXE . . . B 2 29.132 -5.716 187.82 1 78.8 ? C15 CXE 2085 X 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #