data_1V1K # _model_server_result.job_id bs9gGvqXz0Noru61e59YJg _model_server_result.datetime_utc '2025-01-22 19:06:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1v1k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":299}' # _entry.id 1V1K # _exptl.entry_id 1V1K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 465.444 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-1-(DIMETHYLAMINO)-3-{4-[(6-{[2-FLUORO-5-(TRIFLUOROMETHYL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]PHENOXY}PROPAN-2-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1V1K _cell.length_a 54.342 _cell.length_b 72.932 _cell.length_c 73.838 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1V1K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id ACE _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ACE _struct_conn.ptnr1_auth_seq_id 0 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id MET _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id MET _struct_conn.ptnr2_auth_seq_id 1 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.339 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C22 H23 F4 N5 O2' _chem_comp.formula_weight 465.444 _chem_comp.id 3FP _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-1-(DIMETHYLAMINO)-3-{4-[(6-{[2-FLUORO-5-(TRIFLUOROMETHYL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]PHENOXY}PROPAN-2-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-(DIMETHYLAMINO)-3-{4-[(6-{[2-FLUORO-5-(TRIFLUOROMETHYL)PHENYL]AMINO}PYRIMIDIN-4-YL)AMINO]PHENOXY}PROPAN-2-OL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 3FP doub 1 n y C1 N 3FP sing 2 n y C1 N2 3FP sing 3 n n N1 C3 3FP doub 4 n y N1 C 3FP sing 5 n y C2 C3 3FP sing 6 n y C2 H2 3FP sing 7 n n C7 C6 3FP doub 8 n y C7 C8 3FP sing 9 n y C7 H7 3FP sing 10 n n C6 C5 3FP sing 11 n y C6 H6 3FP sing 12 n n C5 C4 3FP doub 13 n y C5 F1 3FP sing 14 n n C4 C9 3FP sing 15 n y C4 N2 3FP sing 16 n n C3 N3 3FP sing 17 n n C11 C10 3FP doub 18 n y C11 C12 3FP sing 19 n y C11 H11 3FP sing 20 n n C10 C15 3FP sing 21 n y C10 N3 3FP sing 22 n n C9 C8 3FP doub 23 n y C9 H9 3FP sing 24 n n C8 C21 3FP sing 25 n n C12 C13 3FP doub 26 n y C12 H12 3FP sing 27 n n C16 O 3FP sing 28 n n C16 C17 3FP sing 29 n n C16 H161 3FP sing 30 n n C16 H162 3FP sing 31 n n C14 C13 3FP sing 32 n y C14 C15 3FP doub 33 n y C14 H14 3FP sing 34 n n C13 O 3FP sing 35 n n C15 H15 3FP sing 36 n n C N 3FP doub 37 n y C H 3FP sing 38 n n N2 HA 3FP sing 39 n n N3 H3 3FP sing 40 n n C21 F2 3FP sing 41 n n C21 F3 3FP sing 42 n n C21 F4 3FP sing 43 n n C17 C18 3FP sing 44 n n C17 O1 3FP sing 45 n n C17 H17 3FP sing 46 n n C18 N4 3FP sing 47 n n C18 H181 3FP sing 48 n n C18 H182 3FP sing 49 n n C19 N4 3FP sing 50 n n C19 H191 3FP sing 51 n n C19 H192 3FP sing 52 n n C19 H193 3FP sing 53 n n C20 N4 3FP sing 54 n n C20 H201 3FP sing 55 n n C20 H202 3FP sing 56 n n C20 H203 3FP sing 57 n n O1 H1 3FP sing 58 n n # _atom_sites.entry_id 1V1K _atom_sites.fract_transf_matrix[1][1] 0.018402 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013711 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013543 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3FP A 1 299 299 3FP 3FP . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . C 3 HOH A 61 2061 2061 HOH HOH . C 3 HOH A 62 2062 2062 HOH HOH . C 3 HOH A 63 2063 2063 HOH HOH . C 3 HOH A 64 2064 2064 HOH HOH . C 3 HOH A 65 2065 2065 HOH HOH . C 3 HOH A 66 2066 2066 HOH HOH . C 3 HOH A 67 2067 2067 HOH HOH . C 3 HOH A 68 2068 2068 HOH HOH . C 3 HOH A 69 2069 2069 HOH HOH . C 3 HOH A 70 2070 2070 HOH HOH . C 3 HOH A 71 2071 2071 HOH HOH . C 3 HOH A 72 2072 2072 HOH HOH . C 3 HOH A 73 2073 2073 HOH HOH . C 3 HOH A 74 2074 2074 HOH HOH . C 3 HOH A 75 2075 2075 HOH HOH . C 3 HOH A 76 2076 2076 HOH HOH . C 3 HOH A 77 2077 2077 HOH HOH . C 3 HOH A 78 2078 2078 HOH HOH . C 3 HOH A 79 2079 2079 HOH HOH . C 3 HOH A 80 2080 2080 HOH HOH . C 3 HOH A 81 2081 2081 HOH HOH . C 3 HOH A 82 2082 2082 HOH HOH . C 3 HOH A 83 2083 2083 HOH HOH . C 3 HOH A 84 2084 2084 HOH HOH . C 3 HOH A 85 2085 2085 HOH HOH . C 3 HOH A 86 2086 2086 HOH HOH . C 3 HOH A 87 2087 2087 HOH HOH . C 3 HOH A 88 2088 2088 HOH HOH . C 3 HOH A 89 2089 2089 HOH HOH . C 3 HOH A 90 2090 2090 HOH HOH . C 3 HOH A 91 2091 2091 HOH HOH . C 3 HOH A 92 2092 2092 HOH HOH . C 3 HOH A 93 2093 2093 HOH HOH . C 3 HOH A 94 2094 2094 HOH HOH . C 3 HOH A 95 2095 2095 HOH HOH . C 3 HOH A 96 2096 2096 HOH HOH . C 3 HOH A 97 2097 2097 HOH HOH . C 3 HOH A 98 2098 2098 HOH HOH . C 3 HOH A 99 2099 2099 HOH HOH . C 3 HOH A 100 2100 2100 HOH HOH . C 3 HOH A 101 2101 2101 HOH HOH . C 3 HOH A 102 2102 2102 HOH HOH . C 3 HOH A 103 2103 2103 HOH HOH . C 3 HOH A 104 2104 2104 HOH HOH . C 3 HOH A 105 2105 2105 HOH HOH . C 3 HOH A 106 2106 2106 HOH HOH . C 3 HOH A 107 2107 2107 HOH HOH . C 3 HOH A 108 2108 2108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3FP . . . B 2 13.682 -8.583 13.331 1 39.69 ? C1 3FP 299 A 1 HETATM 2 N N1 3FP . . . B 2 11.919 -10.324 14.439 1 35.21 ? N1 3FP 299 A 1 HETATM 3 C C2 3FP . . . B 2 12.623 -9.104 12.564 1 37.39 ? C2 3FP 299 A 1 HETATM 4 C C7 3FP . . . B 2 14.258 -5.409 9.302 1 48.18 ? C7 3FP 299 A 1 HETATM 5 C C6 3FP . . . B 2 13.299 -5.297 10.303 1 47.83 ? C6 3FP 299 A 1 HETATM 6 C C5 3FP . . . B 2 13.409 -6.045 11.474 1 47.9 ? C5 3FP 299 A 1 HETATM 7 C C4 3FP . . . B 2 14.487 -6.926 11.646 1 46.02 ? C4 3FP 299 A 1 HETATM 8 C C3 3FP . . . B 2 11.72 -10.003 13.165 1 36.5 ? C3 3FP 299 A 1 HETATM 9 C C11 3FP . . . B 2 9.563 -11.503 10.511 1 43.02 ? C11 3FP 299 A 1 HETATM 10 C C10 3FP . . . B 2 10.172 -10.43 11.189 1 41.34 ? C10 3FP 299 A 1 HETATM 11 C C9 3FP . . . B 2 15.447 -7.019 10.638 1 46.98 ? C9 3FP 299 A 1 HETATM 12 C C8 3FP . . . B 2 15.34 -6.276 9.465 1 49.16 ? C8 3FP 299 A 1 HETATM 13 C C12 3FP . . . B 2 9.103 -11.375 9.197 1 44.79 ? C12 3FP 299 A 1 HETATM 14 C C16 3FP . . . B 2 9.286 -10.532 6.102 1 53.64 ? C16 3FP 299 A 1 HETATM 15 C C14 3FP . . . B 2 9.825 -9.079 9.24 1 44.37 ? C14 3FP 299 A 1 HETATM 16 C C13 3FP . . . B 2 9.258 -10.148 8.542 1 46.14 ? C13 3FP 299 A 1 HETATM 17 C C15 3FP . . . B 2 10.289 -9.201 10.538 1 41.59 ? C15 3FP 299 A 1 HETATM 18 C C 3FP . . . B 2 12.925 -9.825 15.146 1 37.12 ? C 3FP 299 A 1 HETATM 19 N N 3FP . . . B 2 13.798 -8.981 14.621 1 38.76 ? N 3FP 299 A 1 HETATM 20 N N2 3FP . . . B 2 14.634 -7.694 12.811 1 41.73 ? N2 3FP 299 A 1 HETATM 21 F F1 3FP . . . B 2 12.47 -5.931 12.444 1 50.59 ? F1 3FP 299 A 1 HETATM 22 N N3 3FP . . . B 2 10.615 -10.595 12.524 1 38.62 ? N3 3FP 299 A 1 HETATM 23 O O 3FP . . . B 2 8.797 -9.871 7.275 1 50.04 ? O 3FP 299 A 1 HETATM 24 C C21 3FP . . . B 2 16.417 -6.415 8.387 1 51.76 ? C21 3FP 299 A 1 HETATM 25 F F2 3FP . . . B 2 16.77 -5.193 7.778 1 49.95 ? F2 3FP 299 A 1 HETATM 26 F F3 3FP . . . B 2 17.584 -6.869 9.003 1 53.96 ? F3 3FP 299 A 1 HETATM 27 F F4 3FP . . . B 2 16.026 -7.345 7.399 1 53.72 ? F4 3FP 299 A 1 HETATM 28 C C17 3FP . . . B 2 8.531 -9.869 4.918 1 56.56 ? C17 3FP 299 A 1 HETATM 29 C C18 3FP . . . B 2 7.863 -10.847 3.923 1 58.91 ? C18 3FP 299 A 1 HETATM 30 C C19 3FP . . . B 2 5.817 -11.49 5.057 1 61.07 ? C19 3FP 299 A 1 HETATM 31 C C20 3FP . . . B 2 6.669 -12.783 3.339 1 61.58 ? C20 3FP 299 A 1 HETATM 32 N N4 3FP . . . B 2 7.089 -11.973 4.497 1 60.81 ? N4 3FP 299 A 1 HETATM 33 O O1 3FP . . . B 2 7.54 -8.923 5.37 1 57.21 ? O1 3FP 299 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 33 #