data_1V2K # _model_server_result.job_id fM_1YUw47Pm4eVQlSC9tRg _model_server_result.datetime_utc '2024-11-07 04:45:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1v2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":480}' # _entry.id 1V2K # _exptl.entry_id 1V2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1V2K _cell.length_a 54.75 _cell.length_b 54.75 _cell.length_c 144.07 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1V2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 T CYS 22 1_555 A SG CYS 137 T CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 25 T CYS 42 1_555 A SG CYS 41 T CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 109 T CYS 128 1_555 A SG CYS 210 T CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 116 T CYS 136 1_555 A SG CYS 183 T CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 A SG CYS 148 T CYS 168 1_555 A SG CYS 162 T CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf6 A SG CYS 173 T CYS 191 1_555 A SG CYS 197 T CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A OE1 GLU 52 T GLU 70 1_555 C CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc2 A O ASN 54 T ASN 72 1_555 C CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? metalc ? metalc3 A O VAL 57 T VAL 75 1_555 C CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc4 A OE2 GLU 62 T GLU 80 1_555 C CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc5 C CA CA . T CA 480 1_555 E O HOH . T HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc6 C CA CA . T CA 480 1_555 E O HOH . T HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1V2K _atom_sites.fract_transf_matrix[1][1] 0.018265 _atom_sites.fract_transf_matrix[1][2] 0.010545 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02109 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006941 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 T 1 600 600 SO4 SO4 . C 3 CA T 1 480 480 CA CA . D 4 ZEN T 1 1 1 ZEN ZEN . E 5 HOH T 1 601 2 HOH TIP . E 5 HOH T 2 602 3 HOH TIP . E 5 HOH T 3 603 4 HOH TIP . E 5 HOH T 4 604 5 HOH TIP . E 5 HOH T 5 605 6 HOH TIP . E 5 HOH T 6 606 7 HOH TIP . E 5 HOH T 7 607 8 HOH TIP . E 5 HOH T 8 608 9 HOH TIP . E 5 HOH T 9 609 10 HOH TIP . E 5 HOH T 10 610 11 HOH TIP . E 5 HOH T 11 611 12 HOH TIP . E 5 HOH T 12 612 13 HOH TIP . E 5 HOH T 13 613 14 HOH TIP . E 5 HOH T 14 614 15 HOH TIP . E 5 HOH T 15 615 17 HOH TIP . E 5 HOH T 16 616 18 HOH TIP . E 5 HOH T 17 617 19 HOH TIP . E 5 HOH T 18 618 20 HOH TIP . E 5 HOH T 19 619 21 HOH TIP . E 5 HOH T 20 620 22 HOH TIP . E 5 HOH T 21 621 23 HOH TIP . E 5 HOH T 22 622 24 HOH TIP . E 5 HOH T 23 623 25 HOH TIP . E 5 HOH T 24 624 26 HOH TIP . E 5 HOH T 25 625 29 HOH TIP . E 5 HOH T 26 626 30 HOH TIP . E 5 HOH T 27 627 31 HOH TIP . E 5 HOH T 28 628 32 HOH TIP . E 5 HOH T 29 629 33 HOH TIP . E 5 HOH T 30 630 34 HOH TIP . E 5 HOH T 31 631 37 HOH TIP . E 5 HOH T 32 632 38 HOH TIP . E 5 HOH T 33 633 39 HOH TIP . E 5 HOH T 34 634 41 HOH TIP . E 5 HOH T 35 635 42 HOH TIP . E 5 HOH T 36 636 43 HOH TIP . E 5 HOH T 37 637 44 HOH TIP . E 5 HOH T 38 638 47 HOH TIP . E 5 HOH T 39 639 48 HOH TIP . E 5 HOH T 40 640 50 HOH TIP . E 5 HOH T 41 641 51 HOH TIP . E 5 HOH T 42 642 55 HOH TIP . E 5 HOH T 43 643 58 HOH TIP . E 5 HOH T 44 644 61 HOH TIP . E 5 HOH T 45 645 66 HOH TIP . E 5 HOH T 46 646 67 HOH TIP . E 5 HOH T 47 647 68 HOH TIP . E 5 HOH T 48 648 72 HOH TIP . E 5 HOH T 49 649 73 HOH TIP . E 5 HOH T 50 650 75 HOH TIP . E 5 HOH T 51 651 79 HOH TIP . E 5 HOH T 52 652 80 HOH TIP . E 5 HOH T 53 653 96 HOH TIP . E 5 HOH T 54 654 100 HOH TIP . E 5 HOH T 55 655 109 HOH TIP . E 5 HOH T 56 656 116 HOH TIP . E 5 HOH T 57 657 134 HOH TIP . E 5 HOH T 58 658 137 HOH TIP . E 5 HOH T 59 659 299 HOH TIP . E 5 HOH T 60 660 338 HOH TIP . E 5 HOH T 61 661 393 HOH TIP . E 5 HOH T 62 662 451 HOH TIP . E 5 HOH T 63 663 452 HOH TIP . E 5 HOH T 64 664 453 HOH TIP . E 5 HOH T 65 665 454 HOH TIP . E 5 HOH T 66 666 455 HOH TIP . E 5 HOH T 67 667 456 HOH TIP . E 5 HOH T 68 668 457 HOH TIP . E 5 HOH T 69 669 901 HOH TIP . E 5 HOH T 70 670 902 HOH TIP . E 5 HOH T 71 671 903 HOH TIP . E 5 HOH T 72 672 904 HOH TIP . E 5 HOH T 73 673 905 HOH TIP . E 5 HOH T 74 674 906 HOH TIP . E 5 HOH T 75 675 907 HOH TIP . E 5 HOH T 76 676 908 HOH TIP . E 5 HOH T 77 677 909 HOH TIP . E 5 HOH T 78 678 910 HOH TIP . E 5 HOH T 79 679 911 HOH TIP . E 5 HOH T 80 680 912 HOH TIP . E 5 HOH T 81 681 913 HOH TIP . E 5 HOH T 82 682 914 HOH TIP . E 5 HOH T 83 683 915 HOH TIP . E 5 HOH T 84 684 916 HOH TIP . E 5 HOH T 85 685 917 HOH TIP . E 5 HOH T 86 686 918 HOH TIP . E 5 HOH T 87 687 920 HOH TIP . E 5 HOH T 88 688 921 HOH TIP . E 5 HOH T 89 689 922 HOH TIP . E 5 HOH T 90 690 923 HOH TIP . E 5 HOH T 91 691 924 HOH TIP . E 5 HOH T 92 692 925 HOH TIP . E 5 HOH T 93 693 926 HOH TIP . E 5 HOH T 94 694 927 HOH TIP . E 5 HOH T 95 695 928 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 61.572 _atom_site.Cartn_y 61.907 _atom_site.Cartn_z -53.107 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 480 _atom_site.auth_asym_id T _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #