data_1V2P # _model_server_result.job_id U3c5zwrsI0IfwryYnzZ7Gg _model_server_result.datetime_utc '2024-11-29 03:07:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1v2p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":700}' # _entry.id 1V2P # _exptl.entry_id 1V2P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1V2P _cell.length_a 55.08 _cell.length_b 55.08 _cell.length_c 109.75 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1V2P _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 T CYS 22 1_555 A SG CYS 137 T CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 25 T CYS 42 1_555 A SG CYS 41 T CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 109 T CYS 128 1_555 A SG CYS 210 T CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 116 T CYS 136 1_555 A SG CYS 183 T CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 A SG CYS 148 T CYS 168 1_555 A SG CYS 162 T CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 A SG CYS 173 T CYS 191 1_555 A SG CYS 197 T CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OE1 GLU 52 T GLU 70 1_555 C CA CA . T CA 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc2 A O ASN 54 T ASN 72 1_555 C CA CA . T CA 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc3 A O VAL 57 T VAL 75 1_555 C CA CA . T CA 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc4 A OE2 GLU 62 T GLU 80 1_555 C CA CA . T CA 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc5 E O HOH . T HOH 425 1_555 C CA CA . T CA 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc6 E O HOH . T HOH 464 1_555 C CA CA . T CA 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1V2P _atom_sites.fract_transf_matrix[1][1] 0.018155 _atom_sites.fract_transf_matrix[1][2] 0.010482 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020964 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009112 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 T 1 600 600 SO4 SO4 . C 3 CA T 1 700 700 CA CA . D 4 ANH T 1 800 800 ANH INH . E 5 HOH T 1 401 401 HOH TIP . E 5 HOH T 2 402 402 HOH TIP . E 5 HOH T 3 403 403 HOH TIP . E 5 HOH T 4 404 404 HOH TIP . E 5 HOH T 5 405 405 HOH TIP . E 5 HOH T 6 406 406 HOH TIP . E 5 HOH T 7 407 407 HOH TIP . E 5 HOH T 8 408 408 HOH TIP . E 5 HOH T 9 409 409 HOH TIP . E 5 HOH T 10 410 410 HOH TIP . E 5 HOH T 11 414 414 HOH TIP . E 5 HOH T 12 415 415 HOH TIP . E 5 HOH T 13 416 416 HOH TIP . E 5 HOH T 14 417 417 HOH TIP . E 5 HOH T 15 418 418 HOH TIP . E 5 HOH T 16 419 419 HOH TIP . E 5 HOH T 17 420 420 HOH TIP . E 5 HOH T 18 421 421 HOH TIP . E 5 HOH T 19 422 422 HOH TIP . E 5 HOH T 20 423 423 HOH TIP . E 5 HOH T 21 425 425 HOH TIP . E 5 HOH T 22 426 426 HOH TIP . E 5 HOH T 23 428 428 HOH TIP . E 5 HOH T 24 429 429 HOH TIP . E 5 HOH T 25 430 430 HOH TIP . E 5 HOH T 26 431 431 HOH TIP . E 5 HOH T 27 432 432 HOH TIP . E 5 HOH T 28 433 433 HOH TIP . E 5 HOH T 29 434 434 HOH TIP . E 5 HOH T 30 435 435 HOH TIP . E 5 HOH T 31 436 436 HOH TIP . E 5 HOH T 32 438 438 HOH TIP . E 5 HOH T 33 444 444 HOH TIP . E 5 HOH T 34 446 446 HOH TIP . E 5 HOH T 35 447 447 HOH TIP . E 5 HOH T 36 450 450 HOH TIP . E 5 HOH T 37 451 451 HOH TIP . E 5 HOH T 38 453 453 HOH TIP . E 5 HOH T 39 456 456 HOH TIP . E 5 HOH T 40 458 458 HOH TIP . E 5 HOH T 41 460 460 HOH TIP . E 5 HOH T 42 461 461 HOH TIP . E 5 HOH T 43 463 463 HOH TIP . E 5 HOH T 44 464 464 HOH TIP . E 5 HOH T 45 467 467 HOH TIP . E 5 HOH T 46 468 468 HOH TIP . E 5 HOH T 47 469 469 HOH TIP . E 5 HOH T 48 471 471 HOH TIP . E 5 HOH T 49 473 473 HOH TIP . E 5 HOH T 50 474 474 HOH TIP . E 5 HOH T 51 478 478 HOH TIP . E 5 HOH T 52 479 479 HOH TIP . E 5 HOH T 53 491 491 HOH TIP . E 5 HOH T 54 500 500 HOH TIP . E 5 HOH T 55 502 502 HOH TIP . E 5 HOH T 56 532 532 HOH TIP . E 5 HOH T 57 534 534 HOH TIP . E 5 HOH T 58 535 535 HOH TIP . E 5 HOH T 59 544 544 HOH TIP . E 5 HOH T 60 569 569 HOH TIP . E 5 HOH T 61 575 575 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 54.114 _atom_site.Cartn_y 14.854 _atom_site.Cartn_z 30.919 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 700 _atom_site.auth_asym_id T _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #