data_1V41 # _model_server_result.job_id xrA3QVyAxMkzpHUrokoMqA _model_server_result.datetime_utc '2024-11-28 15:23:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1v41 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":290}' # _entry.id 1V41 # _exptl.entry_id 1V41 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 152.114 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-AMINO-1H-[1,2,3]TRIAZOLO[4,5-D]PYRIMIDIN-7-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1V41 _cell.length_a 139.28 _cell.length_b 139.28 _cell.length_c 161.42 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1V41 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 139.28 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 69.64 120.620018 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H4 N6 O' _chem_comp.formula_weight 152.114 _chem_comp.id AZG _chem_comp.mon_nstd_flag . _chem_comp.name 5-AMINO-1H-[1,2,3]TRIAZOLO[4,5-D]PYRIMIDIN-7-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 8-AZAGUANINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 N3 AZG sing 70 n y C4 C5 AZG doub 71 n y C4 N9 AZG sing 72 n y N3 C2 AZG doub 73 n y C2 N2 AZG sing 74 n n C2 N1 AZG sing 75 n y N2 HN21 AZG sing 76 n n N2 HN22 AZG sing 77 n n N1 C6 AZG doub 78 n y C6 O6 AZG sing 79 n n C6 C5 AZG sing 80 n y O6 HO6 AZG sing 81 n n C5 N7 AZG sing 82 n y N7 N8 AZG sing 83 n y N7 HN7 AZG sing 84 n n N8 N9 AZG doub 85 n y # _atom_sites.entry_id 1V41 _atom_sites.fract_transf_matrix[1][1] 0.00718 _atom_sites.fract_transf_matrix[1][2] 0.00415 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00829 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0062 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 E 1 291 291 SO4 SO4 . C 2 SO4 E 1 292 292 SO4 SO4 . D 2 SO4 E 1 293 293 SO4 SO4 . E 2 SO4 E 1 294 294 SO4 SO4 . F 3 AZG E 1 290 290 AZG AZA . G 4 HOH E 1 295 295 HOH WAT . G 4 HOH E 2 296 296 HOH WAT . G 4 HOH E 3 297 297 HOH WAT . G 4 HOH E 4 298 298 HOH WAT . G 4 HOH E 5 299 299 HOH WAT . G 4 HOH E 6 300 300 HOH WAT . G 4 HOH E 7 301 301 HOH WAT . G 4 HOH E 8 302 302 HOH WAT . G 4 HOH E 9 303 303 HOH WAT . G 4 HOH E 10 304 304 HOH WAT . G 4 HOH E 11 305 305 HOH WAT . G 4 HOH E 12 306 306 HOH WAT . G 4 HOH E 13 307 307 HOH WAT . G 4 HOH E 14 308 308 HOH WAT . G 4 HOH E 15 309 309 HOH WAT . G 4 HOH E 16 310 310 HOH WAT . G 4 HOH E 17 311 311 HOH WAT . G 4 HOH E 18 312 312 HOH WAT . G 4 HOH E 19 313 313 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 AZG . . . F 3 53.213 47.258 27.164 1 51.12 ? C4 AZG 290 E 1 HETATM 2 N N3 AZG . . . F 3 54.314 46.666 27.686 1 34.53 ? N3 AZG 290 E 1 HETATM 3 C C2 AZG . . . F 3 55.417 46.996 27.011 1 31.66 ? C2 AZG 290 E 1 HETATM 4 N N2 AZG . . . F 3 56.587 46.503 27.378 1 39.6 ? N2 AZG 290 E 1 HETATM 5 N N1 AZG . . . F 3 55.45 47.823 25.923 1 30.38 ? N1 AZG 290 E 1 HETATM 6 C C6 AZG . . . F 3 54.34 48.456 25.35 1 45.74 ? C6 AZG 290 E 1 HETATM 7 O O6 AZG . . . F 3 54.492 49.193 24.349 1 46.55 ? O6 AZG 290 E 1 HETATM 8 C C5 AZG . . . F 3 53.126 48.113 26.058 1 52.92 ? C5 AZG 290 E 1 HETATM 9 N N7 AZG . . . F 3 51.787 48.519 25.834 1 52.19 ? N7 AZG 290 E 1 HETATM 10 N N8 AZG . . . F 3 51.08 47.906 26.786 1 52.82 ? N8 AZG 290 E 1 HETATM 11 N N9 AZG . . . F 3 51.895 47.116 27.631 1 57.83 ? N9 AZG 290 E 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 11 #