data_1V5Y
#
_model_server_result.job_id            jT_d-Tq1gntMiENvkhVLEg 
_model_server_result.datetime_utc      '2024-11-15 14:25:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1v5y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1455}' 
#
_entry.id    1V5Y 
#
_exptl.entry_id    1V5Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              162.142 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-HYDROXY-2H-CHROMEN-2-ONE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100 
_cell.angle_gamma         90 
_cell.entry_id            1V5Y 
_cell.length_a            101.6 
_cell.length_b            63.3 
_cell.length_c            74.4 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1V5Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C9 H6 O3' 
_chem_comp.formula_weight    162.142 
_chem_comp.id                4HC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-HYDROXY-2H-CHROMEN-2-ONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     4-HYDROXY-1-BENZOPYRAN-2-ONE;4-HYDROXYCOUMARIN 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CA CA2 4HC sing 1 n y 
CA CA6 4HC doub 2 n y 
CA HA 4HC sing 3 n n 
CA2 OA2 4HC doub 4 n n 
CA2 OA3 4HC sing 5 n y 
CA4 CA5 4HC doub 6 n y 
CA4 CD1 4HC sing 7 n y 
CA4 OA3 4HC sing 8 n y 
CA5 CA6 4HC sing 9 n y 
CA5 CD4 4HC sing 10 n y 
CA6 OA6 4HC sing 11 n n 
CD1 CD2 4HC doub 12 n y 
CD1 HD1 4HC sing 13 n n 
CD2 CD3 4HC sing 14 n y 
CD2 HD2 4HC sing 15 n n 
CD3 CD4 4HC doub 16 n y 
CD3 HD3 4HC sing 17 n n 
CD4 HD4 4HC sing 18 n n 
OA6 HA6 4HC sing 19 n n 
#
_atom_sites.entry_id                     1V5Y 
_atom_sites.fract_transf_matrix[1][1]    0.009843 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001736 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015798 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013648 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 1454 454 FMN FMN . 
D 3 4HC A 1 1455 201 4HC U01 . 
E 2 FMN B 1 454 454 FMN FMN . 
F 3 4HC B 1 1201 201 4HC U01 . 
G 4 HOH A 1 1456 1 HOH HOH . 
G 4 HOH A 2 1457 3 HOH HOH . 
G 4 HOH A 3 1458 4 HOH HOH . 
G 4 HOH A 4 1459 5 HOH HOH . 
G 4 HOH A 5 1460 6 HOH HOH . 
G 4 HOH A 6 1461 7 HOH HOH . 
G 4 HOH A 7 1462 8 HOH HOH . 
G 4 HOH A 8 1463 11 HOH HOH . 
G 4 HOH A 9 1464 12 HOH HOH . 
G 4 HOH A 10 1465 13 HOH HOH . 
G 4 HOH A 11 1466 16 HOH HOH . 
G 4 HOH A 12 1467 17 HOH HOH . 
G 4 HOH A 13 1468 18 HOH HOH . 
G 4 HOH A 14 1469 19 HOH HOH . 
G 4 HOH A 15 1470 20 HOH HOH . 
G 4 HOH A 16 1471 27 HOH HOH . 
G 4 HOH A 17 1472 33 HOH HOH . 
G 4 HOH A 18 1473 34 HOH HOH . 
G 4 HOH A 19 1474 35 HOH HOH . 
G 4 HOH A 20 1475 36 HOH HOH . 
G 4 HOH A 21 1476 37 HOH HOH . 
G 4 HOH A 22 1477 38 HOH HOH . 
G 4 HOH A 23 1478 40 HOH HOH . 
G 4 HOH A 24 1479 41 HOH HOH . 
G 4 HOH A 25 1480 43 HOH HOH . 
G 4 HOH A 26 1481 45 HOH HOH . 
G 4 HOH A 27 1482 46 HOH HOH . 
G 4 HOH A 28 1483 47 HOH HOH . 
G 4 HOH A 29 1484 48 HOH HOH . 
G 4 HOH A 30 1485 49 HOH HOH . 
G 4 HOH A 31 1486 54 HOH HOH . 
G 4 HOH A 32 1487 55 HOH HOH . 
G 4 HOH A 33 1488 56 HOH HOH . 
G 4 HOH A 34 1489 58 HOH HOH . 
G 4 HOH A 35 1490 59 HOH HOH . 
G 4 HOH A 36 1491 60 HOH HOH . 
G 4 HOH A 37 1492 61 HOH HOH . 
G 4 HOH A 38 1493 66 HOH HOH . 
G 4 HOH A 39 1494 68 HOH HOH . 
G 4 HOH A 40 1495 69 HOH HOH . 
G 4 HOH A 41 1496 70 HOH HOH . 
G 4 HOH A 42 1497 75 HOH HOH . 
G 4 HOH A 43 1498 76 HOH HOH . 
G 4 HOH A 44 1499 77 HOH HOH . 
G 4 HOH A 45 1500 78 HOH HOH . 
G 4 HOH A 46 1501 81 HOH HOH . 
G 4 HOH A 47 1502 82 HOH HOH . 
G 4 HOH A 48 1503 83 HOH HOH . 
G 4 HOH A 49 1504 88 HOH HOH . 
G 4 HOH A 50 1505 89 HOH HOH . 
G 4 HOH A 51 1506 94 HOH HOH . 
G 4 HOH A 52 1507 95 HOH HOH . 
G 4 HOH A 53 1508 96 HOH HOH . 
G 4 HOH A 54 1509 99 HOH HOH . 
G 4 HOH A 55 1510 100 HOH HOH . 
G 4 HOH A 56 1511 101 HOH HOH . 
G 4 HOH A 57 1512 103 HOH HOH . 
G 4 HOH A 58 1513 107 HOH HOH . 
G 4 HOH A 59 1514 108 HOH HOH . 
G 4 HOH A 60 1515 110 HOH HOH . 
G 4 HOH A 61 1516 116 HOH HOH . 
G 4 HOH A 62 1517 118 HOH HOH . 
G 4 HOH A 63 1518 121 HOH HOH . 
G 4 HOH A 64 1519 123 HOH HOH . 
G 4 HOH A 65 1520 124 HOH HOH . 
G 4 HOH A 66 1521 126 HOH HOH . 
G 4 HOH A 67 1522 127 HOH HOH . 
G 4 HOH A 68 1523 128 HOH HOH . 
G 4 HOH A 69 1524 131 HOH HOH . 
G 4 HOH A 70 1525 132 HOH HOH . 
G 4 HOH A 71 1526 136 HOH HOH . 
G 4 HOH A 72 1527 137 HOH HOH . 
G 4 HOH A 73 1528 139 HOH HOH . 
G 4 HOH A 74 1529 140 HOH HOH . 
G 4 HOH A 75 1530 141 HOH HOH . 
G 4 HOH A 76 1531 149 HOH HOH . 
G 4 HOH A 77 1532 152 HOH HOH . 
G 4 HOH A 78 1533 155 HOH HOH . 
G 4 HOH A 79 1534 156 HOH HOH . 
G 4 HOH A 80 1535 157 HOH HOH . 
G 4 HOH A 81 1536 162 HOH HOH . 
G 4 HOH A 82 1537 163 HOH HOH . 
H 4 HOH B 1 1202 2 HOH HOH . 
H 4 HOH B 2 1203 9 HOH HOH . 
H 4 HOH B 3 1204 10 HOH HOH . 
H 4 HOH B 4 1205 14 HOH HOH . 
H 4 HOH B 5 1206 15 HOH HOH . 
H 4 HOH B 6 1207 21 HOH HOH . 
H 4 HOH B 7 1208 22 HOH HOH . 
H 4 HOH B 8 1209 23 HOH HOH . 
H 4 HOH B 9 1210 24 HOH HOH . 
H 4 HOH B 10 1211 25 HOH HOH . 
H 4 HOH B 11 1212 26 HOH HOH . 
H 4 HOH B 12 1213 28 HOH HOH . 
H 4 HOH B 13 1214 29 HOH HOH . 
H 4 HOH B 14 1215 30 HOH HOH . 
H 4 HOH B 15 1216 31 HOH HOH . 
H 4 HOH B 16 1217 32 HOH HOH . 
H 4 HOH B 17 1218 39 HOH HOH . 
H 4 HOH B 18 1219 42 HOH HOH . 
H 4 HOH B 19 1220 44 HOH HOH . 
H 4 HOH B 20 1221 50 HOH HOH . 
H 4 HOH B 21 1222 51 HOH HOH . 
H 4 HOH B 22 1223 52 HOH HOH . 
H 4 HOH B 23 1224 53 HOH HOH . 
H 4 HOH B 24 1225 57 HOH HOH . 
H 4 HOH B 25 1226 62 HOH HOH . 
H 4 HOH B 26 1227 63 HOH HOH . 
H 4 HOH B 27 1228 64 HOH HOH . 
H 4 HOH B 28 1229 65 HOH HOH . 
H 4 HOH B 29 1230 67 HOH HOH . 
H 4 HOH B 30 1231 71 HOH HOH . 
H 4 HOH B 31 1232 72 HOH HOH . 
H 4 HOH B 32 1233 73 HOH HOH . 
H 4 HOH B 33 1234 74 HOH HOH . 
H 4 HOH B 34 1235 79 HOH HOH . 
H 4 HOH B 35 1236 80 HOH HOH . 
H 4 HOH B 36 1237 84 HOH HOH . 
H 4 HOH B 37 1238 85 HOH HOH . 
H 4 HOH B 38 1239 86 HOH HOH . 
H 4 HOH B 39 1240 87 HOH HOH . 
H 4 HOH B 40 1241 90 HOH HOH . 
H 4 HOH B 41 1242 91 HOH HOH . 
H 4 HOH B 42 1243 92 HOH HOH . 
H 4 HOH B 43 1244 93 HOH HOH . 
H 4 HOH B 44 1245 97 HOH HOH . 
H 4 HOH B 45 1246 98 HOH HOH . 
H 4 HOH B 46 1247 102 HOH HOH . 
H 4 HOH B 47 1248 104 HOH HOH . 
H 4 HOH B 48 1249 105 HOH HOH . 
H 4 HOH B 49 1250 106 HOH HOH . 
H 4 HOH B 50 1251 109 HOH HOH . 
H 4 HOH B 51 1252 111 HOH HOH . 
H 4 HOH B 52 1253 112 HOH HOH . 
H 4 HOH B 53 1254 113 HOH HOH . 
H 4 HOH B 54 1255 114 HOH HOH . 
H 4 HOH B 55 1256 115 HOH HOH . 
H 4 HOH B 56 1257 117 HOH HOH . 
H 4 HOH B 57 1258 119 HOH HOH . 
H 4 HOH B 58 1259 120 HOH HOH . 
H 4 HOH B 59 1260 122 HOH HOH . 
H 4 HOH B 60 1261 125 HOH HOH . 
H 4 HOH B 61 1262 129 HOH HOH . 
H 4 HOH B 62 1263 130 HOH HOH . 
H 4 HOH B 63 1264 133 HOH HOH . 
H 4 HOH B 64 1265 134 HOH HOH . 
H 4 HOH B 65 1266 135 HOH HOH . 
H 4 HOH B 66 1267 138 HOH HOH . 
H 4 HOH B 67 1268 142 HOH HOH . 
H 4 HOH B 68 1269 143 HOH HOH . 
H 4 HOH B 69 1270 144 HOH HOH . 
H 4 HOH B 70 1271 145 HOH HOH . 
H 4 HOH B 71 1272 146 HOH HOH . 
H 4 HOH B 72 1273 147 HOH HOH . 
H 4 HOH B 73 1274 148 HOH HOH . 
H 4 HOH B 74 1275 150 HOH HOH . 
H 4 HOH B 75 1276 151 HOH HOH . 
H 4 HOH B 76 1277 153 HOH HOH . 
H 4 HOH B 77 1278 154 HOH HOH . 
H 4 HOH B 78 1279 158 HOH HOH . 
H 4 HOH B 79 1280 159 HOH HOH . 
H 4 HOH B 80 1281 160 HOH HOH . 
H 4 HOH B 81 1282 161 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CA 4HC . . . D 3 63.803 -1.637 20.048 1 25.9 ? CA 4HC 1455 A 1 
HETATM 2 C CA2 4HC . . . D 3 64.713 -2.68 20.16 1 29.72 ? CA2 4HC 1455 A 1 
HETATM 3 C CA4 4HC . . . D 3 66.375 -1.192 21.102 1 22.45 ? CA4 4HC 1455 A 1 
HETATM 4 C CA5 4HC . . . D 3 65.461 -0.15 21 1 21.3 ? CA5 4HC 1455 A 1 
HETATM 5 C CA6 4HC . . . D 3 64.193 -0.367 20.411 1 22.26 ? CA6 4HC 1455 A 1 
HETATM 6 C CD1 4HC . . . D 3 67.613 -1.009 21.709 1 21.1 ? CD1 4HC 1455 A 1 
HETATM 7 C CD2 4HC . . . D 3 67.922 0.222 22.268 1 18.62 ? CD2 4HC 1455 A 1 
HETATM 8 C CD3 4HC . . . D 3 67.062 1.3 22.089 1 19.63 ? CD3 4HC 1455 A 1 
HETATM 9 C CD4 4HC . . . D 3 65.821 1.108 21.478 1 19.46 ? CD4 4HC 1455 A 1 
HETATM 10 O OA2 4HC . . . D 3 64.344 -3.825 19.886 1 34.32 ? OA2 4HC 1455 A 1 
HETATM 11 O OA3 4HC . . . D 3 66.033 -2.431 20.585 1 27.31 ? OA3 4HC 1455 A 1 
HETATM 12 O OA6 4HC . . . D 3 63.335 0.66 20.173 1 21.39 ? OA6 4HC 1455 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           12 
#