data_1V5Z
#
_model_server_result.job_id            lLlTEld1rQFq13hzpiWrRQ 
_model_server_result.datetime_utc      '2024-11-15 21:26:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1v5z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":454}' 
#
_entry.id    1V5Z 
#
_exptl.entry_id    1V5Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100 
_cell.angle_gamma         90 
_cell.entry_id            1V5Z 
_cell.length_a            101.6 
_cell.length_b            63.3 
_cell.length_c            74.4 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1V5Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 103 n n 
N1 C10 FMN doub 104 n n 
C2 O2 FMN doub 105 n n 
C2 N3 FMN sing 106 n n 
N3 C4 FMN sing 107 n n 
N3 HN3 FMN sing 108 n n 
C4 O4 FMN doub 109 n n 
C4 C4A FMN sing 110 n n 
C4A N5 FMN doub 111 n n 
C4A C10 FMN sing 112 n n 
N5 C5A FMN sing 113 n n 
C5A C6 FMN doub 114 n y 
C5A C9A FMN sing 115 n y 
C6 C7 FMN sing 116 n y 
C6 H6 FMN sing 117 n n 
C7 C7M FMN sing 118 n n 
C7 C8 FMN doub 119 n y 
C7M HM71 FMN sing 120 n n 
C7M HM72 FMN sing 121 n n 
C7M HM73 FMN sing 122 n n 
C8 C8M FMN sing 123 n n 
C8 C9 FMN sing 124 n y 
C8M HM81 FMN sing 125 n n 
C8M HM82 FMN sing 126 n n 
C8M HM83 FMN sing 127 n n 
C9 C9A FMN doub 128 n y 
C9 H9 FMN sing 129 n n 
C9A N10 FMN sing 130 n n 
N10 C10 FMN sing 131 n n 
N10 C1' FMN sing 132 n n 
C1' C2' FMN sing 133 n n 
C1' "H1'1" FMN sing 134 n n 
C1' "H1'2" FMN sing 135 n n 
C2' O2' FMN sing 136 n n 
C2' C3' FMN sing 137 n n 
C2' H2' FMN sing 138 n n 
O2' HO2' FMN sing 139 n n 
C3' O3' FMN sing 140 n n 
C3' C4' FMN sing 141 n n 
C3' H3' FMN sing 142 n n 
O3' HO3' FMN sing 143 n n 
C4' O4' FMN sing 144 n n 
C4' C5' FMN sing 145 n n 
C4' H4' FMN sing 146 n n 
O4' HO4' FMN sing 147 n n 
C5' O5' FMN sing 148 n n 
C5' "H5'1" FMN sing 149 n n 
C5' "H5'2" FMN sing 150 n n 
O5' P FMN sing 151 n n 
P O1P FMN doub 152 n n 
P O2P FMN sing 153 n n 
P O3P FMN sing 154 n n 
O2P HOP2 FMN sing 155 n n 
O3P HOP3 FMN sing 156 n n 
#
_atom_sites.entry_id                     1V5Z 
_atom_sites.fract_transf_matrix[1][1]    0.009843 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001736 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015798 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013648 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 1454 454 FMN FMN . 
D 3 2HC A 1 815 815 2HC OCA . 
E 2 FMN B 1 454 454 FMN FMN . 
F 3 2HC B 1 1815 815 2HC OCA . 
G 4 HOH A 1 1455 1 HOH HOH . 
G 4 HOH A 2 1456 2 HOH HOH . 
G 4 HOH A 3 1457 3 HOH HOH . 
G 4 HOH A 4 1458 5 HOH HOH . 
G 4 HOH A 5 1459 7 HOH HOH . 
G 4 HOH A 6 1460 10 HOH HOH . 
G 4 HOH A 7 1461 11 HOH HOH . 
G 4 HOH A 8 1462 12 HOH HOH . 
G 4 HOH A 9 1463 13 HOH HOH . 
G 4 HOH A 10 1464 17 HOH HOH . 
G 4 HOH A 11 1465 18 HOH HOH . 
G 4 HOH A 12 1466 20 HOH HOH . 
G 4 HOH A 13 1467 21 HOH HOH . 
G 4 HOH A 14 1468 23 HOH HOH . 
G 4 HOH A 15 1469 24 HOH HOH . 
G 4 HOH A 16 1470 25 HOH HOH . 
G 4 HOH A 17 1471 26 HOH HOH . 
G 4 HOH A 18 1472 27 HOH HOH . 
G 4 HOH A 19 1473 28 HOH HOH . 
G 4 HOH A 20 1474 29 HOH HOH . 
G 4 HOH A 21 1475 30 HOH HOH . 
G 4 HOH A 22 1476 31 HOH HOH . 
G 4 HOH A 23 1477 32 HOH HOH . 
G 4 HOH A 24 1478 34 HOH HOH . 
G 4 HOH A 25 1479 35 HOH HOH . 
G 4 HOH A 26 1480 36 HOH HOH . 
G 4 HOH A 27 1481 37 HOH HOH . 
G 4 HOH A 28 1482 39 HOH HOH . 
G 4 HOH A 29 1483 41 HOH HOH . 
G 4 HOH A 30 1484 44 HOH HOH . 
G 4 HOH A 31 1485 45 HOH HOH . 
G 4 HOH A 32 1486 46 HOH HOH . 
G 4 HOH A 33 1487 47 HOH HOH . 
G 4 HOH A 34 1488 48 HOH HOH . 
G 4 HOH A 35 1489 51 HOH HOH . 
G 4 HOH A 36 1490 54 HOH HOH . 
G 4 HOH A 37 1491 55 HOH HOH . 
G 4 HOH A 38 1492 56 HOH HOH . 
G 4 HOH A 39 1493 57 HOH HOH . 
G 4 HOH A 40 1494 58 HOH HOH . 
G 4 HOH A 41 1495 61 HOH HOH . 
G 4 HOH A 42 1496 62 HOH HOH . 
G 4 HOH A 43 1497 66 HOH HOH . 
G 4 HOH A 44 1498 67 HOH HOH . 
G 4 HOH A 45 1499 68 HOH HOH . 
G 4 HOH A 46 1500 71 HOH HOH . 
G 4 HOH A 47 1501 72 HOH HOH . 
G 4 HOH A 48 1502 73 HOH HOH . 
G 4 HOH A 49 1503 74 HOH HOH . 
G 4 HOH A 50 1504 77 HOH HOH . 
G 4 HOH A 51 1505 79 HOH HOH . 
G 4 HOH A 52 1506 80 HOH HOH . 
G 4 HOH A 53 1507 81 HOH HOH . 
G 4 HOH A 54 1508 83 HOH HOH . 
G 4 HOH A 55 1509 84 HOH HOH . 
G 4 HOH A 56 1510 85 HOH HOH . 
G 4 HOH A 57 1511 87 HOH HOH . 
G 4 HOH A 58 1512 88 HOH HOH . 
G 4 HOH A 59 1513 89 HOH HOH . 
G 4 HOH A 60 1514 90 HOH HOH . 
G 4 HOH A 61 1515 91 HOH HOH . 
G 4 HOH A 62 1516 92 HOH HOH . 
G 4 HOH A 63 1517 95 HOH HOH . 
G 4 HOH A 64 1518 97 HOH HOH . 
G 4 HOH A 65 1519 100 HOH HOH . 
G 4 HOH A 66 1520 106 HOH HOH . 
G 4 HOH A 67 1521 113 HOH HOH . 
G 4 HOH A 68 1522 120 HOH HOH . 
G 4 HOH A 69 1523 121 HOH HOH . 
G 4 HOH A 70 1524 122 HOH HOH . 
G 4 HOH A 71 1525 123 HOH HOH . 
G 4 HOH A 72 1526 124 HOH HOH . 
G 4 HOH A 73 1527 126 HOH HOH . 
G 4 HOH A 74 1528 127 HOH HOH . 
G 4 HOH A 75 1529 128 HOH HOH . 
G 4 HOH A 76 1530 129 HOH HOH . 
G 4 HOH A 77 1531 130 HOH HOH . 
G 4 HOH A 78 1532 131 HOH HOH . 
G 4 HOH A 79 1533 132 HOH HOH . 
G 4 HOH A 80 1534 135 HOH HOH . 
G 4 HOH A 81 1535 136 HOH HOH . 
G 4 HOH A 82 1536 137 HOH HOH . 
G 4 HOH A 83 1537 138 HOH HOH . 
G 4 HOH A 84 1538 140 HOH HOH . 
G 4 HOH A 85 1539 142 HOH HOH . 
G 4 HOH A 86 1540 143 HOH HOH . 
G 4 HOH A 87 1541 144 HOH HOH . 
G 4 HOH A 88 1542 146 HOH HOH . 
G 4 HOH A 89 1543 147 HOH HOH . 
G 4 HOH A 90 1544 151 HOH HOH . 
G 4 HOH A 91 1545 152 HOH HOH . 
G 4 HOH A 92 1546 154 HOH HOH . 
H 4 HOH B 1 1816 4 HOH HOH . 
H 4 HOH B 2 1817 6 HOH HOH . 
H 4 HOH B 3 1818 8 HOH HOH . 
H 4 HOH B 4 1819 9 HOH HOH . 
H 4 HOH B 5 1820 14 HOH HOH . 
H 4 HOH B 6 1821 15 HOH HOH . 
H 4 HOH B 7 1822 16 HOH HOH . 
H 4 HOH B 8 1823 19 HOH HOH . 
H 4 HOH B 9 1824 22 HOH HOH . 
H 4 HOH B 10 1825 33 HOH HOH . 
H 4 HOH B 11 1826 38 HOH HOH . 
H 4 HOH B 12 1827 40 HOH HOH . 
H 4 HOH B 13 1828 42 HOH HOH . 
H 4 HOH B 14 1829 43 HOH HOH . 
H 4 HOH B 15 1830 49 HOH HOH . 
H 4 HOH B 16 1831 50 HOH HOH . 
H 4 HOH B 17 1832 52 HOH HOH . 
H 4 HOH B 18 1833 53 HOH HOH . 
H 4 HOH B 19 1834 59 HOH HOH . 
H 4 HOH B 20 1835 60 HOH HOH . 
H 4 HOH B 21 1836 63 HOH HOH . 
H 4 HOH B 22 1837 64 HOH HOH . 
H 4 HOH B 23 1838 65 HOH HOH . 
H 4 HOH B 24 1839 69 HOH HOH . 
H 4 HOH B 25 1840 70 HOH HOH . 
H 4 HOH B 26 1841 75 HOH HOH . 
H 4 HOH B 27 1842 76 HOH HOH . 
H 4 HOH B 28 1843 78 HOH HOH . 
H 4 HOH B 29 1844 82 HOH HOH . 
H 4 HOH B 30 1845 86 HOH HOH . 
H 4 HOH B 31 1846 93 HOH HOH . 
H 4 HOH B 32 1847 94 HOH HOH . 
H 4 HOH B 33 1848 96 HOH HOH . 
H 4 HOH B 34 1849 98 HOH HOH . 
H 4 HOH B 35 1850 99 HOH HOH . 
H 4 HOH B 36 1851 101 HOH HOH . 
H 4 HOH B 37 1852 102 HOH HOH . 
H 4 HOH B 38 1853 103 HOH HOH . 
H 4 HOH B 39 1854 104 HOH HOH . 
H 4 HOH B 40 1855 105 HOH HOH . 
H 4 HOH B 41 1856 107 HOH HOH . 
H 4 HOH B 42 1857 108 HOH HOH . 
H 4 HOH B 43 1858 109 HOH HOH . 
H 4 HOH B 44 1859 110 HOH HOH . 
H 4 HOH B 45 1860 111 HOH HOH . 
H 4 HOH B 46 1861 112 HOH HOH . 
H 4 HOH B 47 1862 114 HOH HOH . 
H 4 HOH B 48 1863 115 HOH HOH . 
H 4 HOH B 49 1864 116 HOH HOH . 
H 4 HOH B 50 1865 117 HOH HOH . 
H 4 HOH B 51 1866 118 HOH HOH . 
H 4 HOH B 52 1867 119 HOH HOH . 
H 4 HOH B 53 1868 125 HOH HOH . 
H 4 HOH B 54 1869 133 HOH HOH . 
H 4 HOH B 55 1870 134 HOH HOH . 
H 4 HOH B 56 1871 139 HOH HOH . 
H 4 HOH B 57 1872 141 HOH HOH . 
H 4 HOH B 58 1873 145 HOH HOH . 
H 4 HOH B 59 1874 148 HOH HOH . 
H 4 HOH B 60 1875 149 HOH HOH . 
H 4 HOH B 61 1876 150 HOH HOH . 
H 4 HOH B 62 1877 153 HOH HOH . 
H 4 HOH B 63 1878 155 HOH HOH . 
H 4 HOH B 64 1879 156 HOH HOH . 
H 4 HOH B 65 1880 157 HOH HOH . 
H 4 HOH B 66 1881 158 HOH HOH . 
H 4 HOH B 67 1882 159 HOH HOH . 
H 4 HOH B 68 1883 160 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . E 2 64.407 -0.119 16.81 1 14.28 ? N1 FMN 454 B 1 
HETATM 2 C C2 FMN . . . E 2 65.438 -0.973 16.495 1 16.87 ? C2 FMN 454 B 1 
HETATM 3 O O2 FMN . . . E 2 65.2 -2.086 16.071 1 19.62 ? O2 FMN 454 B 1 
HETATM 4 N N3 FMN . . . E 2 66.658 -0.68 17.098 1 14.19 ? N3 FMN 454 B 1 
HETATM 5 C C4 FMN . . . E 2 66.931 0.453 17.837 1 18.3 ? C4 FMN 454 B 1 
HETATM 6 O O4 FMN . . . E 2 68.04 0.544 18.367 1 15.98 ? O4 FMN 454 B 1 
HETATM 7 C C4A FMN . . . E 2 65.768 1.348 18.001 1 16.96 ? C4A FMN 454 B 1 
HETATM 8 N N5 FMN . . . E 2 66.003 2.541 18.68 1 16.98 ? N5 FMN 454 B 1 
HETATM 9 C C5A FMN . . . E 2 65.055 3.542 18.727 1 13.94 ? C5A FMN 454 B 1 
HETATM 10 C C6 FMN . . . E 2 65.411 4.825 19.122 1 13.68 ? C6 FMN 454 B 1 
HETATM 11 C C7 FMN . . . E 2 64.495 5.851 19.044 1 14.03 ? C7 FMN 454 B 1 
HETATM 12 C C7M FMN . . . E 2 64.797 7.278 19.575 1 12.53 ? C7M FMN 454 B 1 
HETATM 13 C C8 FMN . . . E 2 63.243 5.598 18.495 1 13.37 ? C8 FMN 454 B 1 
HETATM 14 C C8M FMN . . . E 2 62.37 6.733 18.066 1 14.36 ? C8M FMN 454 B 1 
HETATM 15 C C9 FMN . . . E 2 62.948 4.353 18.025 1 13.67 ? C9 FMN 454 B 1 
HETATM 16 C C9A FMN . . . E 2 63.812 3.292 18.151 1 14.08 ? C9A FMN 454 B 1 
HETATM 17 N N10 FMN . . . E 2 63.549 2.071 17.505 1 14.83 ? N10 FMN 454 B 1 
HETATM 18 C C10 FMN . . . E 2 64.516 1.108 17.406 1 14.82 ? C10 FMN 454 B 1 
HETATM 19 C C1' FMN . . . E 2 62.336 1.728 16.986 1 17.03 ? C1' FMN 454 B 1 
HETATM 20 C C2' FMN . . . E 2 61.136 1.729 17.97 1 16.49 ? C2' FMN 454 B 1 
HETATM 21 O O2' FMN . . . E 2 61.054 0.429 18.516 1 19.47 ? O2' FMN 454 B 1 
HETATM 22 C C3' FMN . . . E 2 59.863 2.09 17.22 1 14.47 ? C3' FMN 454 B 1 
HETATM 23 O O3' FMN . . . E 2 59.953 3.408 16.697 1 16.79 ? O3' FMN 454 B 1 
HETATM 24 C C4' FMN . . . E 2 58.613 1.983 18.095 1 14.77 ? C4' FMN 454 B 1 
HETATM 25 O O4' FMN . . . E 2 58.455 0.628 18.494 1 16.8 ? O4' FMN 454 B 1 
HETATM 26 C C5' FMN . . . E 2 57.307 2.324 17.377 1 13.55 ? C5' FMN 454 B 1 
HETATM 27 O O5' FMN . . . E 2 57.075 1.474 16.225 1 14.87 ? O5' FMN 454 B 1 
HETATM 28 P P FMN . . . E 2 57.145 2.028 14.667 1 17.04 ? P FMN 454 B 1 
HETATM 29 O O1P FMN . . . E 2 57.106 0.671 14.108 1 15.86 ? O1P FMN 454 B 1 
HETATM 30 O O2P FMN . . . E 2 58.441 2.79 14.704 1 13.93 ? O2P FMN 454 B 1 
HETATM 31 O O3P FMN . . . E 2 55.927 2.867 14.73 1 20.81 ? O3P FMN 454 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#