data_1V8Q # _model_server_result.job_id ztB1NqVIBcHqwEYoYOPKwA _model_server_result.datetime_utc '2025-03-05 03:31:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1v8q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 1V8Q # _exptl.entry_id 1V8Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,3-DIHYDROXY-1,4-DITHIOBUTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1V8Q _cell.length_a 48.543 _cell.length_b 48.543 _cell.length_c 139.12 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1V8Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id DTT _chem_comp.mon_nstd_flag . _chem_comp.name 2,3-DIHYDROXY-1,4-DITHIOBUTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1,4-DITHIOTHREITOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 DTT sing 70 n n S1 HS1 DTT sing 71 n n C1 C2 DTT sing 72 n n C1 H11 DTT sing 73 n n C1 H12 DTT sing 74 n n C2 O2 DTT sing 75 n n C2 C3 DTT sing 76 n n C2 H2 DTT sing 77 n n O2 HO2 DTT sing 78 n n C3 O3 DTT sing 79 n n C3 C4 DTT sing 80 n n C3 H3 DTT sing 81 n n O3 HO3 DTT sing 82 n n C4 S4 DTT sing 83 n n C4 H41 DTT sing 84 n n C4 H42 DTT sing 85 n n S4 HS2 DTT sing 86 n n # _atom_sites.entry_id 1V8Q _atom_sites.fract_transf_matrix[1][1] 0.0206 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0206 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007188 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 DTT D 1 101 1 DTT DTT . F 3 HOH A 1 86 2 HOH HOH . F 3 HOH A 2 87 4 HOH HOH . F 3 HOH A 3 88 7 HOH HOH . F 3 HOH A 4 89 8 HOH HOH . F 3 HOH A 5 90 13 HOH HOH . F 3 HOH A 6 91 16 HOH HOH . F 3 HOH A 7 92 17 HOH HOH . G 3 HOH B 1 86 1 HOH HOH . H 3 HOH C 1 86 9 HOH HOH . H 3 HOH C 2 87 12 HOH HOH . I 3 HOH D 1 102 3 HOH HOH . I 3 HOH D 2 103 5 HOH HOH . I 3 HOH D 3 104 6 HOH HOH . I 3 HOH D 4 105 10 HOH HOH . I 3 HOH D 5 106 11 HOH HOH . I 3 HOH D 6 107 14 HOH HOH . I 3 HOH D 7 108 15 HOH HOH . I 3 HOH D 8 109 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 DTT . . . E 2 16.698 36.261 32.422 1 99.33 ? S1 DTT 101 D 1 HETATM 2 C C1 DTT . . . E 2 15.291 35.239 32.791 1 95.51 ? C1 DTT 101 D 1 HETATM 3 C C2 DTT . . . E 2 15.688 34.938 34.169 1 94.23 ? C2 DTT 101 D 1 HETATM 4 O O2 DTT . . . E 2 14.969 35.481 34.795 1 90.52 ? O2 DTT 101 D 1 HETATM 5 C C3 DTT . . . E 2 15.891 33.523 34.455 1 94.94 ? C3 DTT 101 D 1 HETATM 6 O O3 DTT . . . E 2 17.004 33.176 33.74 1 96.44 ? O3 DTT 101 D 1 HETATM 7 C C4 DTT . . . E 2 14.889 32.581 34.086 1 94.7 ? C4 DTT 101 D 1 HETATM 8 S S4 DTT . . . E 2 14.689 32.127 35.74 1 92.33 ? S4 DTT 101 D 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #