data_1V8Y # _model_server_result.job_id oUyYELi_pMMwZrXeIZj85w _model_server_result.datetime_utc '2024-10-18 23:27:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1v8y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1V8Y # _exptl.entry_id 1V8Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1V8Y _cell.length_a 49.655 _cell.length_b 49.655 _cell.length_c 118.473 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1V8Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 118.473 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 44 A GLU 44 6_655 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc2 A OE2 GLU 70 A GLU 70 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc3 A OE1 GLU 82 A GLU 82 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc4 B ZN ZN . A ZN 300 1_555 E O HOH . A HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc5 B ZN ZN . A ZN 300 1_555 E O HOH . A HOH 674 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1V8Y _atom_sites.fract_transf_matrix[1][1] 0.020139 _atom_sites.fract_transf_matrix[1][2] 0.011627 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023254 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 300 300 ZN ZN2 . C 2 ZN A 1 301 301 ZN ZN2 . D 3 APR A 1 619 619 APR APR . E 4 HOH A 1 620 1 HOH TIP . E 4 HOH A 2 621 2 HOH TIP . E 4 HOH A 3 622 3 HOH TIP . E 4 HOH A 4 623 4 HOH TIP . E 4 HOH A 5 624 5 HOH TIP . E 4 HOH A 6 625 6 HOH TIP . E 4 HOH A 7 626 7 HOH TIP . E 4 HOH A 8 627 8 HOH TIP . E 4 HOH A 9 628 9 HOH TIP . E 4 HOH A 10 629 10 HOH TIP . E 4 HOH A 11 630 11 HOH TIP . E 4 HOH A 12 631 12 HOH TIP . E 4 HOH A 13 632 13 HOH TIP . E 4 HOH A 14 633 14 HOH TIP . E 4 HOH A 15 634 15 HOH TIP . E 4 HOH A 16 635 16 HOH TIP . E 4 HOH A 17 636 17 HOH TIP . E 4 HOH A 18 637 18 HOH TIP . E 4 HOH A 19 638 19 HOH TIP . E 4 HOH A 20 639 20 HOH TIP . E 4 HOH A 21 640 21 HOH TIP . E 4 HOH A 22 641 22 HOH TIP . E 4 HOH A 23 642 23 HOH TIP . E 4 HOH A 24 643 24 HOH TIP . E 4 HOH A 25 644 25 HOH TIP . E 4 HOH A 26 645 26 HOH TIP . E 4 HOH A 27 646 27 HOH TIP . E 4 HOH A 28 647 28 HOH TIP . E 4 HOH A 29 648 29 HOH TIP . E 4 HOH A 30 649 31 HOH TIP . E 4 HOH A 31 650 32 HOH TIP . E 4 HOH A 32 651 33 HOH TIP . E 4 HOH A 33 652 34 HOH TIP . E 4 HOH A 34 653 35 HOH TIP . E 4 HOH A 35 654 36 HOH TIP . E 4 HOH A 36 655 37 HOH TIP . E 4 HOH A 37 656 38 HOH TIP . E 4 HOH A 38 657 39 HOH TIP . E 4 HOH A 39 658 40 HOH TIP . E 4 HOH A 40 659 43 HOH TIP . E 4 HOH A 41 660 44 HOH TIP . E 4 HOH A 42 661 45 HOH TIP . E 4 HOH A 43 662 46 HOH TIP . E 4 HOH A 44 663 47 HOH TIP . E 4 HOH A 45 664 50 HOH TIP . E 4 HOH A 46 665 51 HOH TIP . E 4 HOH A 47 666 52 HOH TIP . E 4 HOH A 48 667 53 HOH TIP . E 4 HOH A 49 668 54 HOH TIP . E 4 HOH A 50 669 56 HOH TIP . E 4 HOH A 51 670 57 HOH TIP . E 4 HOH A 52 671 58 HOH TIP . E 4 HOH A 53 672 59 HOH TIP . E 4 HOH A 54 673 61 HOH TIP . E 4 HOH A 55 674 62 HOH TIP . E 4 HOH A 56 675 63 HOH TIP . E 4 HOH A 57 676 64 HOH TIP . E 4 HOH A 58 677 65 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.654 _atom_site.Cartn_y 10.558 _atom_site.Cartn_z 43.082 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 78.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 300 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 442 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #