data_1VAR # _model_server_result.job_id sHowmvvQjL87OqDJxbESWw _model_server_result.datetime_utc '2024-12-18 02:23:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1var # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":199}' # _entry.id 1VAR # _exptl.entry_id 1VAR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VAR _cell.length_a 75 _cell.length_b 78.1 _cell.length_c 68.1 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VAR _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 26 A HIS 26 1_555 C MN MN3 . A MN3 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc2 A NE2 HIS 74 A HIS 74 1_555 C MN MN3 . A MN3 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc3 A OD2 ASP 159 A ASP 159 1_555 C MN MN3 . A MN3 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc4 A NE2 HIS 163 A HIS 163 1_555 C MN MN3 . A MN3 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc5 C MN MN3 . A MN3 199 1_555 E O HOH . A HOH 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc6 B NE2 HIS 26 B HIS 26 1_555 D MN MN3 . B MN3 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc7 B NE2 HIS 74 B HIS 74 1_555 D MN MN3 . B MN3 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc8 B OD2 ASP 159 B ASP 159 1_555 D MN MN3 . B MN3 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc9 B NE2 HIS 163 B HIS 163 1_555 D MN MN3 . B MN3 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc10 D MN MN3 . B MN3 199 1_555 F O HOH . B HOH 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? # _chem_comp.formula 'Mn 3' _chem_comp.formula_weight 54.938 _chem_comp.id MN3 _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1VAR _atom_sites.fract_transf_matrix[1][1] 0.013333 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN3 A 1 199 199 MN3 MN3 . D 2 MN3 B 1 199 199 MN3 MN3 . E 3 HOH A 1 200 200 HOH HOH . E 3 HOH A 2 201 201 HOH HOH . E 3 HOH A 3 205 205 HOH HOH . E 3 HOH A 4 207 207 HOH HOH . E 3 HOH A 5 208 208 HOH HOH . E 3 HOH A 6 209 209 HOH HOH . E 3 HOH A 7 212 212 HOH HOH . E 3 HOH A 8 213 213 HOH HOH . E 3 HOH A 9 219 219 HOH HOH . E 3 HOH A 10 222 222 HOH HOH . E 3 HOH A 11 223 223 HOH HOH . E 3 HOH A 12 225 225 HOH HOH . E 3 HOH A 13 226 226 HOH HOH . E 3 HOH A 14 228 228 HOH HOH . E 3 HOH A 15 229 229 HOH HOH . E 3 HOH A 16 232 232 HOH HOH . E 3 HOH A 17 236 236 HOH HOH . E 3 HOH A 18 237 237 HOH HOH . E 3 HOH A 19 239 239 HOH HOH . E 3 HOH A 20 240 240 HOH HOH . E 3 HOH A 21 242 242 HOH HOH . E 3 HOH A 22 243 243 HOH HOH . E 3 HOH A 23 244 244 HOH HOH . E 3 HOH A 24 246 246 HOH HOH . E 3 HOH A 25 249 249 HOH HOH . E 3 HOH A 26 250 250 HOH HOH . E 3 HOH A 27 251 251 HOH HOH . E 3 HOH A 28 253 253 HOH HOH . E 3 HOH A 29 254 254 HOH HOH . E 3 HOH A 30 261 261 HOH HOH . E 3 HOH A 31 262 262 HOH HOH . E 3 HOH A 32 270 270 HOH HOH . E 3 HOH A 33 271 271 HOH HOH . E 3 HOH A 34 272 272 HOH HOH . E 3 HOH A 35 275 275 HOH HOH . E 3 HOH A 36 276 276 HOH HOH . E 3 HOH A 37 277 277 HOH HOH . E 3 HOH A 38 285 285 HOH HOH . E 3 HOH A 39 286 286 HOH HOH . E 3 HOH A 40 287 287 HOH HOH . E 3 HOH A 41 289 289 HOH HOH . E 3 HOH A 42 291 291 HOH HOH . E 3 HOH A 43 294 294 HOH HOH . E 3 HOH A 44 297 297 HOH HOH . E 3 HOH A 45 298 298 HOH HOH . E 3 HOH A 46 300 300 HOH HOH . E 3 HOH A 47 301 301 HOH HOH . E 3 HOH A 48 302 302 HOH HOH . E 3 HOH A 49 303 303 HOH HOH . E 3 HOH A 50 304 304 HOH HOH . E 3 HOH A 51 306 306 HOH HOH . E 3 HOH A 52 307 307 HOH HOH . E 3 HOH A 53 308 308 HOH HOH . E 3 HOH A 54 310 310 HOH HOH . E 3 HOH A 55 312 312 HOH HOH . E 3 HOH A 56 313 313 HOH HOH . E 3 HOH A 57 314 314 HOH HOH . E 3 HOH A 58 315 315 HOH HOH . E 3 HOH A 59 318 318 HOH HOH . E 3 HOH A 60 320 320 HOH HOH . E 3 HOH A 61 323 323 HOH HOH . E 3 HOH A 62 324 324 HOH HOH . E 3 HOH A 63 327 327 HOH HOH . E 3 HOH A 64 328 328 HOH HOH . E 3 HOH A 65 329 329 HOH HOH . E 3 HOH A 66 331 331 HOH HOH . E 3 HOH A 67 332 332 HOH HOH . E 3 HOH A 68 334 334 HOH HOH . E 3 HOH A 69 335 335 HOH HOH . E 3 HOH A 70 336 336 HOH HOH . E 3 HOH A 71 339 339 HOH HOH . E 3 HOH A 72 342 342 HOH HOH . E 3 HOH A 73 343 343 HOH HOH . E 3 HOH A 74 345 345 HOH HOH . E 3 HOH A 75 346 346 HOH HOH . E 3 HOH A 76 347 347 HOH HOH . E 3 HOH A 77 350 350 HOH HOH . E 3 HOH A 78 351 351 HOH HOH . E 3 HOH A 79 356 356 HOH HOH . E 3 HOH A 80 358 358 HOH HOH . E 3 HOH A 81 359 359 HOH HOH . E 3 HOH A 82 360 360 HOH HOH . E 3 HOH A 83 364 364 HOH HOH . E 3 HOH A 84 365 365 HOH HOH . E 3 HOH A 85 366 366 HOH HOH . E 3 HOH A 86 367 367 HOH HOH . E 3 HOH A 87 369 369 HOH HOH . E 3 HOH A 88 370 370 HOH HOH . E 3 HOH A 89 376 376 HOH HOH . E 3 HOH A 90 379 379 HOH HOH . E 3 HOH A 91 382 382 HOH HOH . E 3 HOH A 92 383 383 HOH HOH . E 3 HOH A 93 384 384 HOH HOH . F 3 HOH B 1 200 200 HOH HOH . F 3 HOH B 2 202 202 HOH HOH . F 3 HOH B 3 203 203 HOH HOH . F 3 HOH B 4 204 204 HOH HOH . F 3 HOH B 5 206 206 HOH HOH . F 3 HOH B 6 210 210 HOH HOH . F 3 HOH B 7 211 211 HOH HOH . F 3 HOH B 8 214 214 HOH HOH . F 3 HOH B 9 215 215 HOH HOH . F 3 HOH B 10 216 216 HOH HOH . F 3 HOH B 11 217 217 HOH HOH . F 3 HOH B 12 218 218 HOH HOH . F 3 HOH B 13 220 220 HOH HOH . F 3 HOH B 14 221 221 HOH HOH . F 3 HOH B 15 224 224 HOH HOH . F 3 HOH B 16 227 227 HOH HOH . F 3 HOH B 17 230 230 HOH HOH . F 3 HOH B 18 231 231 HOH HOH . F 3 HOH B 19 233 233 HOH HOH . F 3 HOH B 20 234 234 HOH HOH . F 3 HOH B 21 235 235 HOH HOH . F 3 HOH B 22 238 238 HOH HOH . F 3 HOH B 23 241 241 HOH HOH . F 3 HOH B 24 245 245 HOH HOH . F 3 HOH B 25 247 247 HOH HOH . F 3 HOH B 26 248 248 HOH HOH . F 3 HOH B 27 252 252 HOH HOH . F 3 HOH B 28 255 255 HOH HOH . F 3 HOH B 29 256 256 HOH HOH . F 3 HOH B 30 257 257 HOH HOH . F 3 HOH B 31 258 258 HOH HOH . F 3 HOH B 32 259 259 HOH HOH . F 3 HOH B 33 260 260 HOH HOH . F 3 HOH B 34 263 263 HOH HOH . F 3 HOH B 35 264 264 HOH HOH . F 3 HOH B 36 265 265 HOH HOH . F 3 HOH B 37 266 266 HOH HOH . F 3 HOH B 38 267 267 HOH HOH . F 3 HOH B 39 268 268 HOH HOH . F 3 HOH B 40 269 269 HOH HOH . F 3 HOH B 41 273 273 HOH HOH . F 3 HOH B 42 274 274 HOH HOH . F 3 HOH B 43 278 278 HOH HOH . F 3 HOH B 44 279 279 HOH HOH . F 3 HOH B 45 281 281 HOH HOH . F 3 HOH B 46 282 282 HOH HOH . F 3 HOH B 47 284 284 HOH HOH . F 3 HOH B 48 290 290 HOH HOH . F 3 HOH B 49 292 292 HOH HOH . F 3 HOH B 50 293 293 HOH HOH . F 3 HOH B 51 295 295 HOH HOH . F 3 HOH B 52 296 296 HOH HOH . F 3 HOH B 53 299 299 HOH HOH . F 3 HOH B 54 309 309 HOH HOH . F 3 HOH B 55 311 311 HOH HOH . F 3 HOH B 56 316 316 HOH HOH . F 3 HOH B 57 321 321 HOH HOH . F 3 HOH B 58 322 322 HOH HOH . F 3 HOH B 59 325 325 HOH HOH . F 3 HOH B 60 330 330 HOH HOH . F 3 HOH B 61 333 333 HOH HOH . F 3 HOH B 62 338 338 HOH HOH . F 3 HOH B 63 340 340 HOH HOH . F 3 HOH B 64 341 341 HOH HOH . F 3 HOH B 65 344 344 HOH HOH . F 3 HOH B 66 348 348 HOH HOH . F 3 HOH B 67 352 352 HOH HOH . F 3 HOH B 68 353 353 HOH HOH . F 3 HOH B 69 354 354 HOH HOH . F 3 HOH B 70 362 362 HOH HOH . F 3 HOH B 71 363 363 HOH HOH . F 3 HOH B 72 368 368 HOH HOH . F 3 HOH B 73 371 371 HOH HOH . F 3 HOH B 74 372 372 HOH HOH . F 3 HOH B 75 373 373 HOH HOH . F 3 HOH B 76 374 374 HOH HOH . F 3 HOH B 77 375 375 HOH HOH . F 3 HOH B 78 377 377 HOH HOH . F 3 HOH B 79 380 380 HOH HOH . F 3 HOH B 80 381 381 HOH HOH . F 3 HOH B 81 386 386 HOH HOH . F 3 HOH B 82 387 387 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN3 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.007 _atom_site.Cartn_y -9.43 _atom_site.Cartn_z 58.104 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN3 _atom_site.auth_seq_id 199 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 516 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #