data_1VCK # _model_server_result.job_id ChCsw1iT9-GFt1GkgO3GSA _model_server_result.datetime_utc '2025-01-11 20:42:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vck # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":212}' # _entry.id 1VCK # _exptl.entry_id 1VCK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 34.081 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HYDROSULFURIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VCK _cell.length_a 98.281 _cell.length_b 98.281 _cell.length_c 98.281 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VCK _symmetry.cell_setting ? _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 46 A CYS 46 1_555 C FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc2 A ND1 HIS 48 A HIS 48 1_555 C FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc3 A OE1 GLU 55 A GLU 55 1_555 B FE FE . A FE 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc4 A OE2 GLU 55 A GLU 55 9_555 B FE FE . A FE 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc5 A SG CYS 65 A CYS 65 1_555 C FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc6 A ND1 HIS 68 A HIS 68 1_555 C FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc7 B FE FE . A FE 211 1_555 E O HOH . A HOH 260 9_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? # _chem_comp.formula 'H2 S' _chem_comp.formula_weight 34.081 _chem_comp.id H2S _chem_comp.mon_nstd_flag . _chem_comp.name 'HYDROSULFURIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HYDROGEN SULFIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S HS1 H2S sing 133 n n S HS2 H2S sing 134 n n # _atom_sites.entry_id 1VCK _atom_sites.fract_transf_matrix[1][1] 0.010175 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010175 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 211 211 FE FE . C 3 FES A 1 201 201 FES FES . D 4 H2S A 1 212 212 H2S H2S . E 5 HOH A 1 213 1 HOH HOH . E 5 HOH A 2 214 2 HOH HOH . E 5 HOH A 3 215 3 HOH HOH . E 5 HOH A 4 216 4 HOH HOH . E 5 HOH A 5 217 5 HOH HOH . E 5 HOH A 6 218 6 HOH HOH . E 5 HOH A 7 219 7 HOH HOH . E 5 HOH A 8 220 8 HOH HOH . E 5 HOH A 9 221 9 HOH HOH . E 5 HOH A 10 222 10 HOH HOH . E 5 HOH A 11 223 11 HOH HOH . E 5 HOH A 12 224 12 HOH HOH . E 5 HOH A 13 225 13 HOH HOH . E 5 HOH A 14 226 14 HOH HOH . E 5 HOH A 15 227 15 HOH HOH . E 5 HOH A 16 228 16 HOH HOH . E 5 HOH A 17 229 17 HOH HOH . E 5 HOH A 18 230 18 HOH HOH . E 5 HOH A 19 231 19 HOH HOH . E 5 HOH A 20 232 20 HOH HOH . E 5 HOH A 21 233 21 HOH HOH . E 5 HOH A 22 234 22 HOH HOH . E 5 HOH A 23 235 23 HOH HOH . E 5 HOH A 24 236 24 HOH HOH . E 5 HOH A 25 237 25 HOH HOH . E 5 HOH A 26 238 26 HOH HOH . E 5 HOH A 27 239 27 HOH HOH . E 5 HOH A 28 240 28 HOH HOH . E 5 HOH A 29 241 29 HOH HOH . E 5 HOH A 30 242 30 HOH HOH . E 5 HOH A 31 243 31 HOH HOH . E 5 HOH A 32 244 32 HOH HOH . E 5 HOH A 33 245 33 HOH HOH . E 5 HOH A 34 246 34 HOH HOH . E 5 HOH A 35 247 35 HOH HOH . E 5 HOH A 36 248 36 HOH HOH . E 5 HOH A 37 249 37 HOH HOH . E 5 HOH A 38 250 38 HOH HOH . E 5 HOH A 39 251 39 HOH HOH . E 5 HOH A 40 252 40 HOH HOH . E 5 HOH A 41 253 41 HOH HOH . E 5 HOH A 42 254 42 HOH HOH . E 5 HOH A 43 255 43 HOH HOH . E 5 HOH A 44 256 44 HOH HOH . E 5 HOH A 45 257 45 HOH HOH . E 5 HOH A 46 258 46 HOH HOH . E 5 HOH A 47 259 47 HOH HOH . E 5 HOH A 48 260 48 HOH HOH . E 5 HOH A 49 261 49 HOH HOH . E 5 HOH A 50 262 50 HOH HOH . E 5 HOH A 51 263 51 HOH HOH . E 5 HOH A 52 264 52 HOH HOH . E 5 HOH A 53 265 53 HOH HOH . E 5 HOH A 54 266 54 HOH HOH . E 5 HOH A 55 267 55 HOH HOH . E 5 HOH A 56 268 56 HOH HOH . E 5 HOH A 57 269 57 HOH HOH . E 5 HOH A 58 270 58 HOH HOH . E 5 HOH A 59 271 59 HOH HOH . E 5 HOH A 60 272 60 HOH HOH . E 5 HOH A 61 273 61 HOH HOH . E 5 HOH A 62 274 62 HOH HOH . E 5 HOH A 63 275 63 HOH HOH . E 5 HOH A 64 276 64 HOH HOH . E 5 HOH A 65 277 65 HOH HOH . E 5 HOH A 66 278 66 HOH HOH . E 5 HOH A 67 279 67 HOH HOH . E 5 HOH A 68 280 68 HOH HOH . E 5 HOH A 69 281 69 HOH HOH . E 5 HOH A 70 282 70 HOH HOH . E 5 HOH A 71 283 71 HOH HOH . E 5 HOH A 72 284 72 HOH HOH . E 5 HOH A 73 285 73 HOH HOH . E 5 HOH A 74 286 74 HOH HOH . E 5 HOH A 75 287 75 HOH HOH . E 5 HOH A 76 288 76 HOH HOH . E 5 HOH A 77 289 77 HOH HOH . E 5 HOH A 78 290 78 HOH HOH . E 5 HOH A 79 291 79 HOH HOH . E 5 HOH A 80 292 80 HOH HOH . E 5 HOH A 81 293 81 HOH HOH . E 5 HOH A 82 294 82 HOH HOH . E 5 HOH A 83 295 83 HOH HOH . E 5 HOH A 84 296 84 HOH HOH . E 5 HOH A 85 297 85 HOH HOH . E 5 HOH A 86 298 86 HOH HOH . E 5 HOH A 87 299 87 HOH HOH . E 5 HOH A 88 300 88 HOH HOH . E 5 HOH A 89 301 89 HOH HOH . E 5 HOH A 90 302 90 HOH HOH . E 5 HOH A 91 303 91 HOH HOH . E 5 HOH A 92 304 92 HOH HOH . E 5 HOH A 93 305 93 HOH HOH . E 5 HOH A 94 306 94 HOH HOH . E 5 HOH A 95 307 95 HOH HOH . E 5 HOH A 96 308 96 HOH HOH . E 5 HOH A 97 309 97 HOH HOH . E 5 HOH A 98 310 98 HOH HOH . E 5 HOH A 99 311 99 HOH HOH . E 5 HOH A 100 312 100 HOH HOH . E 5 HOH A 101 313 101 HOH HOH . E 5 HOH A 102 314 102 HOH HOH . E 5 HOH A 103 315 103 HOH HOH . E 5 HOH A 104 316 104 HOH HOH . E 5 HOH A 105 317 105 HOH HOH . E 5 HOH A 106 318 106 HOH HOH . E 5 HOH A 107 319 107 HOH HOH . E 5 HOH A 108 320 108 HOH HOH . E 5 HOH A 109 321 109 HOH HOH . E 5 HOH A 110 322 110 HOH HOH . E 5 HOH A 111 323 111 HOH HOH . E 5 HOH A 112 324 112 HOH HOH . E 5 HOH A 113 325 113 HOH HOH . E 5 HOH A 114 326 114 HOH HOH . E 5 HOH A 115 327 115 HOH HOH . E 5 HOH A 116 328 116 HOH HOH . E 5 HOH A 117 329 117 HOH HOH . E 5 HOH A 118 330 118 HOH HOH . E 5 HOH A 119 331 119 HOH HOH . E 5 HOH A 120 332 120 HOH HOH . E 5 HOH A 121 333 121 HOH HOH . E 5 HOH A 122 334 122 HOH HOH . E 5 HOH A 123 335 123 HOH HOH . E 5 HOH A 124 336 124 HOH HOH . E 5 HOH A 125 337 125 HOH HOH . E 5 HOH A 126 338 126 HOH HOH . E 5 HOH A 127 339 127 HOH HOH . E 5 HOH A 128 340 128 HOH HOH . E 5 HOH A 129 341 129 HOH HOH . E 5 HOH A 130 342 130 HOH HOH . E 5 HOH A 131 343 131 HOH HOH . E 5 HOH A 132 344 132 HOH HOH . E 5 HOH A 133 345 133 HOH HOH . E 5 HOH A 134 346 134 HOH HOH . E 5 HOH A 135 347 135 HOH HOH . E 5 HOH A 136 348 136 HOH HOH . E 5 HOH A 137 349 137 HOH HOH . E 5 HOH A 138 350 138 HOH HOH . E 5 HOH A 139 351 139 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol S _atom_site.label_atom_id S _atom_site.label_comp_id H2S _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 49.631 _atom_site.Cartn_y 51.154 _atom_site.Cartn_z 47.959 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id S _atom_site.auth_comp_id H2S _atom_site.auth_seq_id 212 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #