data_1VE7
#
_model_server_result.job_id            x8lVZ18s4-tlG4Ltt8oHSQ 
_model_server_result.datetime_utc      '2024-11-16 16:54:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ve7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":751}' 
#
_entry.id    1VE7 
#
_exptl.entry_id    1VE7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1VE7 
_cell.length_a            63.883 
_cell.length_b            104.622 
_cell.length_c            168.004 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1VE7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 416 A CYS 416 1_555 A SG CYS 453 A CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
disulf ? disulf2 B SG CYS 416 B CYS 416 1_555 B SG CYS 453 B CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 149 n n 
C1 C2 GOL sing 150 n n 
C1 H11 GOL sing 151 n n 
C1 H12 GOL sing 152 n n 
O1 HO1 GOL sing 153 n n 
C2 O2 GOL sing 154 n n 
C2 C3 GOL sing 155 n n 
C2 H2 GOL sing 156 n n 
O2 HO2 GOL sing 157 n n 
C3 O3 GOL sing 158 n n 
C3 H31 GOL sing 159 n n 
C3 H32 GOL sing 160 n n 
O3 HO3 GOL sing 161 n n 
#
_atom_sites.entry_id                     1VE7 
_atom_sites.fract_transf_matrix[1][1]    0.015654 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009558 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005952 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 4NP A 1 701 701 4NP PNP . 
D 3 GOL A 1 751 751 GOL GOL . 
E 2 4NP B 1 1701 701 4NP PNP . 
F 4 HOH A 1 752 1 HOH WAT . 
F 4 HOH A 2 753 5 HOH WAT . 
F 4 HOH A 3 754 6 HOH WAT . 
F 4 HOH A 4 755 7 HOH WAT . 
F 4 HOH A 5 756 9 HOH WAT . 
F 4 HOH A 6 757 11 HOH WAT . 
F 4 HOH A 7 758 12 HOH WAT . 
F 4 HOH A 8 759 13 HOH WAT . 
F 4 HOH A 9 760 14 HOH WAT . 
F 4 HOH A 10 761 15 HOH WAT . 
F 4 HOH A 11 762 16 HOH WAT . 
F 4 HOH A 12 763 17 HOH WAT . 
F 4 HOH A 13 764 19 HOH WAT . 
F 4 HOH A 14 765 20 HOH WAT . 
F 4 HOH A 15 766 21 HOH WAT . 
F 4 HOH A 16 767 23 HOH WAT . 
F 4 HOH A 17 768 24 HOH WAT . 
F 4 HOH A 18 769 27 HOH WAT . 
F 4 HOH A 19 770 28 HOH WAT . 
F 4 HOH A 20 771 30 HOH WAT . 
F 4 HOH A 21 772 31 HOH WAT . 
F 4 HOH A 22 773 34 HOH WAT . 
F 4 HOH A 23 774 37 HOH WAT . 
F 4 HOH A 24 775 38 HOH WAT . 
F 4 HOH A 25 776 40 HOH WAT . 
F 4 HOH A 26 777 43 HOH WAT . 
F 4 HOH A 27 778 49 HOH WAT . 
F 4 HOH A 28 779 51 HOH WAT . 
F 4 HOH A 29 780 53 HOH WAT . 
F 4 HOH A 30 781 54 HOH WAT . 
F 4 HOH A 31 782 55 HOH WAT . 
F 4 HOH A 32 783 56 HOH WAT . 
F 4 HOH A 33 784 57 HOH WAT . 
F 4 HOH A 34 785 59 HOH WAT . 
F 4 HOH A 35 786 61 HOH WAT . 
F 4 HOH A 36 787 62 HOH WAT . 
F 4 HOH A 37 788 63 HOH WAT . 
F 4 HOH A 38 789 65 HOH WAT . 
F 4 HOH A 39 790 66 HOH WAT . 
F 4 HOH A 40 791 67 HOH WAT . 
F 4 HOH A 41 792 68 HOH WAT . 
F 4 HOH A 42 793 69 HOH WAT . 
F 4 HOH A 43 794 71 HOH WAT . 
F 4 HOH A 44 795 73 HOH WAT . 
F 4 HOH A 45 796 74 HOH WAT . 
F 4 HOH A 46 797 78 HOH WAT . 
F 4 HOH A 47 798 80 HOH WAT . 
F 4 HOH A 48 799 82 HOH WAT . 
F 4 HOH A 49 800 86 HOH WAT . 
F 4 HOH A 50 801 88 HOH WAT . 
F 4 HOH A 51 802 90 HOH WAT . 
F 4 HOH A 52 803 91 HOH WAT . 
F 4 HOH A 53 804 93 HOH WAT . 
F 4 HOH A 54 805 95 HOH WAT . 
F 4 HOH A 55 806 96 HOH WAT . 
F 4 HOH A 56 807 97 HOH WAT . 
F 4 HOH A 57 808 98 HOH WAT . 
F 4 HOH A 58 809 99 HOH WAT . 
F 4 HOH A 59 810 102 HOH WAT . 
F 4 HOH A 60 811 103 HOH WAT . 
F 4 HOH A 61 812 105 HOH WAT . 
F 4 HOH A 62 813 108 HOH WAT . 
F 4 HOH A 63 814 109 HOH WAT . 
F 4 HOH A 64 815 111 HOH WAT . 
F 4 HOH A 65 816 112 HOH WAT . 
F 4 HOH A 66 817 114 HOH WAT . 
F 4 HOH A 67 818 119 HOH WAT . 
F 4 HOH A 68 819 120 HOH WAT . 
F 4 HOH A 69 820 121 HOH WAT . 
F 4 HOH A 70 821 129 HOH WAT . 
F 4 HOH A 71 822 134 HOH WAT . 
F 4 HOH A 72 823 137 HOH WAT . 
F 4 HOH A 73 824 139 HOH WAT . 
F 4 HOH A 74 825 140 HOH WAT . 
F 4 HOH A 75 826 145 HOH WAT . 
F 4 HOH A 76 827 147 HOH WAT . 
F 4 HOH A 77 828 151 HOH WAT . 
F 4 HOH A 78 829 152 HOH WAT . 
F 4 HOH A 79 830 154 HOH WAT . 
F 4 HOH A 80 831 156 HOH WAT . 
F 4 HOH A 81 832 160 HOH WAT . 
F 4 HOH A 82 833 162 HOH WAT . 
F 4 HOH A 83 834 163 HOH WAT . 
F 4 HOH A 84 835 164 HOH WAT . 
F 4 HOH A 85 836 165 HOH WAT . 
F 4 HOH A 86 837 166 HOH WAT . 
F 4 HOH A 87 838 167 HOH WAT . 
F 4 HOH A 88 839 168 HOH WAT . 
F 4 HOH A 89 840 170 HOH WAT . 
F 4 HOH A 90 841 178 HOH WAT . 
F 4 HOH A 91 842 179 HOH WAT . 
F 4 HOH A 92 843 180 HOH WAT . 
F 4 HOH A 93 844 181 HOH WAT . 
F 4 HOH A 94 845 184 HOH WAT . 
F 4 HOH A 95 846 187 HOH WAT . 
F 4 HOH A 96 847 188 HOH WAT . 
F 4 HOH A 97 848 191 HOH WAT . 
F 4 HOH A 98 849 194 HOH WAT . 
F 4 HOH A 99 850 195 HOH WAT . 
F 4 HOH A 100 851 198 HOH WAT . 
F 4 HOH A 101 852 200 HOH WAT . 
F 4 HOH A 102 853 202 HOH WAT . 
F 4 HOH A 103 854 211 HOH WAT . 
F 4 HOH A 104 855 214 HOH WAT . 
F 4 HOH A 105 856 215 HOH WAT . 
F 4 HOH A 106 857 216 HOH WAT . 
F 4 HOH A 107 858 220 HOH WAT . 
G 4 HOH B 1 1702 2 HOH WAT . 
G 4 HOH B 2 1703 3 HOH WAT . 
G 4 HOH B 3 1704 4 HOH WAT . 
G 4 HOH B 4 1705 8 HOH WAT . 
G 4 HOH B 5 1706 10 HOH WAT . 
G 4 HOH B 6 1707 18 HOH WAT . 
G 4 HOH B 7 1708 22 HOH WAT . 
G 4 HOH B 8 1709 25 HOH WAT . 
G 4 HOH B 9 1710 26 HOH WAT . 
G 4 HOH B 10 1711 29 HOH WAT . 
G 4 HOH B 11 1712 32 HOH WAT . 
G 4 HOH B 12 1713 33 HOH WAT . 
G 4 HOH B 13 1714 36 HOH WAT . 
G 4 HOH B 14 1715 39 HOH WAT . 
G 4 HOH B 15 1716 42 HOH WAT . 
G 4 HOH B 16 1717 45 HOH WAT . 
G 4 HOH B 17 1718 46 HOH WAT . 
G 4 HOH B 18 1719 47 HOH WAT . 
G 4 HOH B 19 1720 48 HOH WAT . 
G 4 HOH B 20 1721 50 HOH WAT . 
G 4 HOH B 21 1722 52 HOH WAT . 
G 4 HOH B 22 1723 58 HOH WAT . 
G 4 HOH B 23 1724 64 HOH WAT . 
G 4 HOH B 24 1725 70 HOH WAT . 
G 4 HOH B 25 1726 77 HOH WAT . 
G 4 HOH B 26 1727 79 HOH WAT . 
G 4 HOH B 27 1728 81 HOH WAT . 
G 4 HOH B 28 1729 84 HOH WAT . 
G 4 HOH B 29 1730 85 HOH WAT . 
G 4 HOH B 30 1731 87 HOH WAT . 
G 4 HOH B 31 1732 89 HOH WAT . 
G 4 HOH B 32 1733 94 HOH WAT . 
G 4 HOH B 33 1734 104 HOH WAT . 
G 4 HOH B 34 1735 106 HOH WAT . 
G 4 HOH B 35 1736 110 HOH WAT . 
G 4 HOH B 36 1737 113 HOH WAT . 
G 4 HOH B 37 1738 115 HOH WAT . 
G 4 HOH B 38 1739 116 HOH WAT . 
G 4 HOH B 39 1740 117 HOH WAT . 
G 4 HOH B 40 1741 118 HOH WAT . 
G 4 HOH B 41 1742 122 HOH WAT . 
G 4 HOH B 42 1743 123 HOH WAT . 
G 4 HOH B 43 1744 124 HOH WAT . 
G 4 HOH B 44 1745 127 HOH WAT . 
G 4 HOH B 45 1746 130 HOH WAT . 
G 4 HOH B 46 1747 131 HOH WAT . 
G 4 HOH B 47 1748 132 HOH WAT . 
G 4 HOH B 48 1749 133 HOH WAT . 
G 4 HOH B 49 1750 135 HOH WAT . 
G 4 HOH B 50 1751 136 HOH WAT . 
G 4 HOH B 51 1752 138 HOH WAT . 
G 4 HOH B 52 1753 142 HOH WAT . 
G 4 HOH B 53 1754 143 HOH WAT . 
G 4 HOH B 54 1755 144 HOH WAT . 
G 4 HOH B 55 1756 146 HOH WAT . 
G 4 HOH B 56 1757 150 HOH WAT . 
G 4 HOH B 57 1758 153 HOH WAT . 
G 4 HOH B 58 1759 157 HOH WAT . 
G 4 HOH B 59 1760 158 HOH WAT . 
G 4 HOH B 60 1761 159 HOH WAT . 
G 4 HOH B 61 1762 161 HOH WAT . 
G 4 HOH B 62 1763 172 HOH WAT . 
G 4 HOH B 63 1764 174 HOH WAT . 
G 4 HOH B 64 1765 175 HOH WAT . 
G 4 HOH B 65 1766 177 HOH WAT . 
G 4 HOH B 66 1767 182 HOH WAT . 
G 4 HOH B 67 1768 183 HOH WAT . 
G 4 HOH B 68 1769 186 HOH WAT . 
G 4 HOH B 69 1770 193 HOH WAT . 
G 4 HOH B 70 1771 196 HOH WAT . 
G 4 HOH B 71 1772 199 HOH WAT . 
G 4 HOH B 72 1773 203 HOH WAT . 
G 4 HOH B 73 1774 205 HOH WAT . 
G 4 HOH B 74 1775 208 HOH WAT . 
G 4 HOH B 75 1776 213 HOH WAT . 
G 4 HOH B 76 1777 217 HOH WAT . 
G 4 HOH B 77 1778 218 HOH WAT . 
G 4 HOH B 78 1779 219 HOH WAT . 
G 4 HOH B 79 1780 221 HOH WAT . 
G 4 HOH B 80 1781 222 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 45.844 108.102 16.812 1 54.4 ? C1 GOL 751 A 1 
HETATM 2 O O1 GOL . . . D 3 44.69 107.969 15.853 1 54.88 ? O1 GOL 751 A 1 
HETATM 3 C C2 GOL . . . D 3 45.654 108.295 18.142 1 54.41 ? C2 GOL 751 A 1 
HETATM 4 O O2 GOL . . . D 3 44.746 107.29 18.502 1 56.3 ? O2 GOL 751 A 1 
HETATM 5 C C3 GOL . . . D 3 46.383 109.219 18.547 1 53.54 ? C3 GOL 751 A 1 
HETATM 6 O O3 GOL . . . D 3 47.426 110.363 18.519 1 52.98 ? O3 GOL 751 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#