data_1VEQ # _model_server_result.job_id ZLmYg38uWlZC9Rj4mL7l4w _model_server_result.datetime_utc '2024-11-05 00:41:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1veq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":202}' # _entry.id 1VEQ # _exptl.entry_id 1VEQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1VEQ _cell.length_a 194.667 _cell.length_b 194.667 _cell.length_c 120.612 _cell.Z_PDB 72 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VEQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 39 A HIS 39 1_555 V FE FE . J FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc2 A OD1 ASP 66 A ASP 66 1_555 M FE FE . A FE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc3 A OD2 ASP 66 A ASP 66 1_555 M FE FE . A FE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc4 A OE2 GLU 70 A GLU 70 1_555 M FE FE . A FE 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc5 M FE FE . A FE 210 1_555 J NE2 HIS 39 J HIS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc6 B NE2 HIS 39 B HIS 39 1_555 Q FE FE . E FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc7 B OD1 ASP 66 B ASP 66 1_555 N FE FE . B FE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc8 B OD2 ASP 66 B ASP 66 1_555 N FE FE . B FE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc9 B OE2 GLU 70 B GLU 70 1_555 N FE FE . B FE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc10 N FE FE . B FE 205 1_555 E NE2 HIS 39 E HIS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc11 C NE2 HIS 39 C HIS 39 1_555 U FE FE . I FE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc12 C OD1 ASP 66 C ASP 66 1_555 O FE FE . C FE 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc13 C OD2 ASP 66 C ASP 66 1_555 O FE FE . C FE 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc14 C OE2 GLU 70 C GLU 70 1_555 O FE FE . C FE 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc15 O FE FE . C FE 209 1_555 I NE2 HIS 39 I HIS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc16 D NE2 HIS 39 D HIS 39 1_555 S FE FE . G FE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc17 D OD2 ASP 66 D ASP 66 1_555 P FE FE . D FE 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc18 D OD1 ASP 66 D ASP 66 1_555 P FE FE . D FE 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc19 D OE2 GLU 70 D GLU 70 1_555 P FE FE . D FE 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc20 P FE FE . D FE 207 1_555 G NE2 HIS 39 G HIS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc21 E OD2 ASP 66 E ASP 66 1_555 Q FE FE . E FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc22 E OD1 ASP 66 E ASP 66 1_555 Q FE FE . E FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc23 E OE2 GLU 70 E GLU 70 1_555 Q FE FE . E FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc24 F NE2 HIS 39 F HIS 39 1_555 X FE FE . L FE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc25 F OD1 ASP 66 F ASP 66 1_555 R FE FE . F FE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc26 F OD2 ASP 66 F ASP 66 1_555 R FE FE . F FE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc27 F OE2 GLU 70 F GLU 70 1_555 R FE FE . F FE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc28 R FE FE . F FE 212 1_555 L NE2 HIS 39 L HIS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc29 G OD1 ASP 66 G ASP 66 1_555 S FE FE . G FE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc30 G OD2 ASP 66 G ASP 66 1_555 S FE FE . G FE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc31 G OE2 GLU 70 G GLU 70 1_555 S FE FE . G FE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc32 H NE2 HIS 39 H HIS 39 1_555 W FE FE . K FE 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc33 H OD2 ASP 66 H ASP 66 1_555 T FE FE . H FE 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc34 H OD1 ASP 66 H ASP 66 1_555 T FE FE . H FE 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc35 H OE2 GLU 70 H GLU 70 1_555 T FE FE . H FE 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc36 T FE FE . H FE 211 1_555 K NE2 HIS 39 K HIS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc37 I OD1 ASP 66 I ASP 66 1_555 U FE FE . I FE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc38 I OD2 ASP 66 I ASP 66 1_555 U FE FE . I FE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc39 I OE2 GLU 70 I GLU 70 1_555 U FE FE . I FE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc40 J OD1 ASP 66 J ASP 66 1_555 V FE FE . J FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc41 J OD2 ASP 66 J ASP 66 1_555 V FE FE . J FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc42 J OE2 GLU 70 J GLU 70 1_555 V FE FE . J FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc43 K OD2 ASP 66 K ASP 66 1_555 W FE FE . K FE 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc44 K OD1 ASP 66 K ASP 66 1_555 W FE FE . K FE 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc45 K OE2 GLU 70 K GLU 70 1_555 W FE FE . K FE 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc46 L OD1 ASP 66 L ASP 66 1_555 X FE FE . L FE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc47 L OD2 ASP 66 L ASP 66 1_555 X FE FE . L FE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc48 L OE2 GLU 70 L GLU 70 1_555 X FE FE . L FE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1VEQ _atom_sites.fract_transf_matrix[1][1] 0.005137 _atom_sites.fract_transf_matrix[1][2] 0.002966 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005932 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 FE A 1 210 210 FE FE3 . N 2 FE B 1 205 205 FE FE3 . O 2 FE C 1 209 209 FE FE3 . P 2 FE D 1 207 207 FE FE3 . Q 2 FE E 1 202 202 FE FE3 . R 2 FE F 1 212 212 FE FE3 . S 2 FE G 1 204 204 FE FE3 . T 2 FE H 1 211 211 FE FE3 . U 2 FE I 1 203 203 FE FE3 . V 2 FE J 1 201 201 FE FE3 . W 2 FE K 1 208 208 FE FE3 . X 2 FE L 1 206 206 FE FE3 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id Q _atom_site.label_entity_id 2 _atom_site.Cartn_x 52.223 _atom_site.Cartn_y 96.309 _atom_site.Cartn_z 51.033 _atom_site.occupancy 0.6 _atom_site.B_iso_or_equiv 22.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 202 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #