data_1VEV # _model_server_result.job_id VYH8TL8tva05T9NeIbjXjA _model_server_result.datetime_utc '2024-12-04 17:50:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vev # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1800}' # _entry.id 1VEV # _exptl.entry_id 1VEV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VEV _cell.length_a 82.192 _cell.length_b 82.192 _cell.length_c 201.04 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VEV _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1,2 B,G,H,I,K 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 82.192 82.192 100.52 3 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 101 A CYS 101 1_555 C ZN ZN . A ZN 1513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc2 A NE2 HIS 143 A HIS 143 1_555 C ZN ZN . A ZN 1513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc3 A NE2 HIS 147 A HIS 147 1_555 C ZN ZN . A ZN 1513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc4 C ZN ZN . A ZN 1513 1_555 F O1 FMT . A FMT 1800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc5 B SG CYS 101 B CYS 101 1_555 G ZN ZN . B ZN 2513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc6 B NE2 HIS 143 B HIS 143 1_555 G ZN ZN . B ZN 2513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc7 B NE2 HIS 147 B HIS 147 1_555 G ZN ZN . B ZN 2513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc8 G ZN ZN . B ZN 2513 1_555 I O2 FMT . B FMT 2800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 1VEV _atom_sites.fract_transf_matrix[1][1] 0.012167 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012167 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004974 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1513 1513 ZN ZN2 . D 3 MES A 1 1716 1716 MES MES . E 3 MES A 1 3716 3716 MES MES . F 4 FMT A 1 1800 1800 FMT CBX . G 2 ZN B 1 2513 2513 ZN ZN2 . H 3 MES B 1 2716 2717 MES MES . I 4 FMT B 1 2800 2800 FMT CBX . J 5 HOH A 1 3717 2 HOH WAT . J 5 HOH A 2 3718 4 HOH WAT . J 5 HOH A 3 3719 7 HOH WAT . J 5 HOH A 4 3720 9 HOH WAT . J 5 HOH A 5 3721 12 HOH WAT . J 5 HOH A 6 3722 17 HOH WAT . J 5 HOH A 7 3723 19 HOH WAT . J 5 HOH A 8 3724 20 HOH WAT . J 5 HOH A 9 3725 21 HOH WAT . J 5 HOH A 10 3726 23 HOH WAT . J 5 HOH A 11 3727 24 HOH WAT . J 5 HOH A 12 3728 26 HOH WAT . J 5 HOH A 13 3729 27 HOH WAT . J 5 HOH A 14 3730 28 HOH WAT . J 5 HOH A 15 3731 29 HOH WAT . J 5 HOH A 16 3732 32 HOH WAT . J 5 HOH A 17 3733 33 HOH WAT . J 5 HOH A 18 3734 38 HOH WAT . J 5 HOH A 19 3735 40 HOH WAT . J 5 HOH A 20 3736 42 HOH WAT . J 5 HOH A 21 3737 43 HOH WAT . J 5 HOH A 22 3738 44 HOH WAT . J 5 HOH A 23 3739 47 HOH WAT . J 5 HOH A 24 3740 48 HOH WAT . J 5 HOH A 25 3741 52 HOH WAT . J 5 HOH A 26 3742 53 HOH WAT . J 5 HOH A 27 3743 54 HOH WAT . J 5 HOH A 28 3744 55 HOH WAT . J 5 HOH A 29 3745 56 HOH WAT . J 5 HOH A 30 3746 66 HOH WAT . J 5 HOH A 31 3747 72 HOH WAT . J 5 HOH A 32 3748 74 HOH WAT . J 5 HOH A 33 3749 75 HOH WAT . J 5 HOH A 34 3750 78 HOH WAT . J 5 HOH A 35 3751 80 HOH WAT . J 5 HOH A 36 3752 82 HOH WAT . J 5 HOH A 37 3753 83 HOH WAT . J 5 HOH A 38 3754 84 HOH WAT . J 5 HOH A 39 3755 85 HOH WAT . J 5 HOH A 40 3756 90 HOH WAT . J 5 HOH A 41 3757 91 HOH WAT . J 5 HOH A 42 3758 95 HOH WAT . J 5 HOH A 43 3759 96 HOH WAT . J 5 HOH A 44 3760 97 HOH WAT . J 5 HOH A 45 3761 99 HOH WAT . J 5 HOH A 46 3762 101 HOH WAT . J 5 HOH A 47 3763 102 HOH WAT . J 5 HOH A 48 3764 103 HOH WAT . J 5 HOH A 49 3765 105 HOH WAT . J 5 HOH A 50 3766 107 HOH WAT . J 5 HOH A 51 3767 108 HOH WAT . J 5 HOH A 52 3768 112 HOH WAT . J 5 HOH A 53 3769 115 HOH WAT . J 5 HOH A 54 3770 117 HOH WAT . J 5 HOH A 55 3771 123 HOH WAT . J 5 HOH A 56 3772 127 HOH WAT . J 5 HOH A 57 3773 128 HOH WAT . J 5 HOH A 58 3774 129 HOH WAT . J 5 HOH A 59 3775 130 HOH WAT . J 5 HOH A 60 3776 131 HOH WAT . J 5 HOH A 61 3777 133 HOH WAT . J 5 HOH A 62 3778 143 HOH WAT . J 5 HOH A 63 3779 146 HOH WAT . J 5 HOH A 64 3780 148 HOH WAT . J 5 HOH A 65 3781 149 HOH WAT . J 5 HOH A 66 3782 150 HOH WAT . J 5 HOH A 67 3783 151 HOH WAT . J 5 HOH A 68 3784 152 HOH WAT . J 5 HOH A 69 3785 155 HOH WAT . J 5 HOH A 70 3786 156 HOH WAT . J 5 HOH A 71 3787 158 HOH WAT . J 5 HOH A 72 3788 159 HOH WAT . J 5 HOH A 73 3789 161 HOH WAT . J 5 HOH A 74 3790 167 HOH WAT . J 5 HOH A 75 3791 171 HOH WAT . J 5 HOH A 76 3792 172 HOH WAT . J 5 HOH A 77 3793 174 HOH WAT . J 5 HOH A 78 3794 175 HOH WAT . J 5 HOH A 79 3795 176 HOH WAT . J 5 HOH A 80 3796 177 HOH WAT . J 5 HOH A 81 3797 180 HOH WAT . J 5 HOH A 82 3798 182 HOH WAT . J 5 HOH A 83 3799 183 HOH WAT . J 5 HOH A 84 3800 185 HOH WAT . J 5 HOH A 85 3801 193 HOH WAT . J 5 HOH A 86 3802 194 HOH WAT . J 5 HOH A 87 3803 196 HOH WAT . J 5 HOH A 88 3804 198 HOH WAT . J 5 HOH A 89 3805 199 HOH WAT . J 5 HOH A 90 3806 200 HOH WAT . J 5 HOH A 91 3807 201 HOH WAT . J 5 HOH A 92 3808 203 HOH WAT . J 5 HOH A 93 3809 205 HOH WAT . J 5 HOH A 94 3810 206 HOH WAT . J 5 HOH A 95 3811 207 HOH WAT . J 5 HOH A 96 3812 209 HOH WAT . J 5 HOH A 97 3813 211 HOH WAT . K 5 HOH B 1 2801 1 HOH WAT . K 5 HOH B 2 2802 3 HOH WAT . K 5 HOH B 3 2803 5 HOH WAT . K 5 HOH B 4 2804 6 HOH WAT . K 5 HOH B 5 2805 8 HOH WAT . K 5 HOH B 6 2806 10 HOH WAT . K 5 HOH B 7 2807 11 HOH WAT . K 5 HOH B 8 2808 13 HOH WAT . K 5 HOH B 9 2809 14 HOH WAT . K 5 HOH B 10 2810 15 HOH WAT . K 5 HOH B 11 2811 18 HOH WAT . K 5 HOH B 12 2812 22 HOH WAT . K 5 HOH B 13 2813 25 HOH WAT . K 5 HOH B 14 2814 30 HOH WAT . K 5 HOH B 15 2815 31 HOH WAT . K 5 HOH B 16 2816 34 HOH WAT . K 5 HOH B 17 2817 35 HOH WAT . K 5 HOH B 18 2818 36 HOH WAT . K 5 HOH B 19 2819 37 HOH WAT . K 5 HOH B 20 2820 39 HOH WAT . K 5 HOH B 21 2821 41 HOH WAT . K 5 HOH B 22 2822 45 HOH WAT . K 5 HOH B 23 2823 46 HOH WAT . K 5 HOH B 24 2824 49 HOH WAT . K 5 HOH B 25 2825 50 HOH WAT . K 5 HOH B 26 2826 51 HOH WAT . K 5 HOH B 27 2827 57 HOH WAT . K 5 HOH B 28 2828 58 HOH WAT . K 5 HOH B 29 2829 59 HOH WAT . K 5 HOH B 30 2830 60 HOH WAT . K 5 HOH B 31 2831 61 HOH WAT . K 5 HOH B 32 2832 62 HOH WAT . K 5 HOH B 33 2833 63 HOH WAT . K 5 HOH B 34 2834 64 HOH WAT . K 5 HOH B 35 2835 65 HOH WAT . K 5 HOH B 36 2836 67 HOH WAT . K 5 HOH B 37 2837 68 HOH WAT . K 5 HOH B 38 2838 69 HOH WAT . K 5 HOH B 39 2839 70 HOH WAT . K 5 HOH B 40 2840 71 HOH WAT . K 5 HOH B 41 2841 73 HOH WAT . K 5 HOH B 42 2842 76 HOH WAT . K 5 HOH B 43 2843 77 HOH WAT . K 5 HOH B 44 2844 79 HOH WAT . K 5 HOH B 45 2845 81 HOH WAT . K 5 HOH B 46 2846 86 HOH WAT . K 5 HOH B 47 2847 87 HOH WAT . K 5 HOH B 48 2848 88 HOH WAT . K 5 HOH B 49 2849 89 HOH WAT . K 5 HOH B 50 2850 92 HOH WAT . K 5 HOH B 51 2851 93 HOH WAT . K 5 HOH B 52 2852 94 HOH WAT . K 5 HOH B 53 2853 98 HOH WAT . K 5 HOH B 54 2854 100 HOH WAT . K 5 HOH B 55 2855 104 HOH WAT . K 5 HOH B 56 2856 106 HOH WAT . K 5 HOH B 57 2857 109 HOH WAT . K 5 HOH B 58 2858 110 HOH WAT . K 5 HOH B 59 2859 111 HOH WAT . K 5 HOH B 60 2860 113 HOH WAT . K 5 HOH B 61 2861 114 HOH WAT . K 5 HOH B 62 2862 116 HOH WAT . K 5 HOH B 63 2863 118 HOH WAT . K 5 HOH B 64 2864 119 HOH WAT . K 5 HOH B 65 2865 120 HOH WAT . K 5 HOH B 66 2866 121 HOH WAT . K 5 HOH B 67 2867 122 HOH WAT . K 5 HOH B 68 2868 124 HOH WAT . K 5 HOH B 69 2869 125 HOH WAT . K 5 HOH B 70 2870 126 HOH WAT . K 5 HOH B 71 2871 132 HOH WAT . K 5 HOH B 72 2872 134 HOH WAT . K 5 HOH B 73 2873 135 HOH WAT . K 5 HOH B 74 2874 136 HOH WAT . K 5 HOH B 75 2875 137 HOH WAT . K 5 HOH B 76 2876 138 HOH WAT . K 5 HOH B 77 2877 139 HOH WAT . K 5 HOH B 78 2878 140 HOH WAT . K 5 HOH B 79 2879 141 HOH WAT . K 5 HOH B 80 2880 142 HOH WAT . K 5 HOH B 81 2881 144 HOH WAT . K 5 HOH B 82 2882 145 HOH WAT . K 5 HOH B 83 2883 147 HOH WAT . K 5 HOH B 84 2884 153 HOH WAT . K 5 HOH B 85 2885 154 HOH WAT . K 5 HOH B 86 2886 157 HOH WAT . K 5 HOH B 87 2887 160 HOH WAT . K 5 HOH B 88 2888 162 HOH WAT . K 5 HOH B 89 2889 163 HOH WAT . K 5 HOH B 90 2890 164 HOH WAT . K 5 HOH B 91 2891 165 HOH WAT . K 5 HOH B 92 2892 166 HOH WAT . K 5 HOH B 93 2893 168 HOH WAT . K 5 HOH B 94 2894 169 HOH WAT . K 5 HOH B 95 2895 170 HOH WAT . K 5 HOH B 96 2896 173 HOH WAT . K 5 HOH B 97 2897 178 HOH WAT . K 5 HOH B 98 2898 179 HOH WAT . K 5 HOH B 99 2899 181 HOH WAT . K 5 HOH B 100 2900 184 HOH WAT . K 5 HOH B 101 2901 186 HOH WAT . K 5 HOH B 102 2902 187 HOH WAT . K 5 HOH B 103 2903 188 HOH WAT . K 5 HOH B 104 2904 189 HOH WAT . K 5 HOH B 105 2905 190 HOH WAT . K 5 HOH B 106 2906 191 HOH WAT . K 5 HOH B 107 2907 192 HOH WAT . K 5 HOH B 108 2908 195 HOH WAT . K 5 HOH B 109 2909 197 HOH WAT . K 5 HOH B 110 2910 202 HOH WAT . K 5 HOH B 111 2911 204 HOH WAT . K 5 HOH B 112 2912 208 HOH WAT . K 5 HOH B 113 2913 210 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . F 4 55.154 37.809 63.474 1 34.75 ? C FMT 1800 A 1 HETATM 2 O O1 FMT . . . F 4 54.985 37.578 62.301 1 35.78 ? O1 FMT 1800 A 1 HETATM 3 O O2 FMT . . . F 4 54.743 38.878 64.117 1 33.36 ? O2 FMT 1800 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #