data_1VFL # _model_server_result.job_id IdYumKBB0GXeX-_w2_nB8w _model_server_result.datetime_utc '2025-02-27 02:35:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vfl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 1VFL # _exptl.entry_id 1VFL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VFL _cell.length_a 73.726 _cell.length_b 73.726 _cell.length_c 134.013 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VFL _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 14 A HIS 12 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc2 A NE2 HIS 16 A HIS 14 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc3 A NE2 HIS 213 A HIS 211 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc4 A OD1 ASP 294 A ASP 292 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc5 B ZN ZN . A ZN 501 1_555 C O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1VFL _atom_sites.fract_transf_matrix[1][1] 0.013564 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013564 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 501 501 ZN ZN . C 3 HOH A 1 502 1 HOH HOH . C 3 HOH A 2 503 2 HOH HOH . C 3 HOH A 3 504 3 HOH HOH . C 3 HOH A 4 505 4 HOH HOH . C 3 HOH A 5 506 5 HOH HOH . C 3 HOH A 6 507 6 HOH HOH . C 3 HOH A 7 508 7 HOH HOH . C 3 HOH A 8 509 8 HOH HOH . C 3 HOH A 9 510 9 HOH HOH . C 3 HOH A 10 511 10 HOH HOH . C 3 HOH A 11 512 11 HOH HOH . C 3 HOH A 12 513 12 HOH HOH . C 3 HOH A 13 514 13 HOH HOH . C 3 HOH A 14 515 14 HOH HOH . C 3 HOH A 15 516 15 HOH HOH . C 3 HOH A 16 517 16 HOH HOH . C 3 HOH A 17 518 17 HOH HOH . C 3 HOH A 18 519 18 HOH HOH . C 3 HOH A 19 520 19 HOH HOH . C 3 HOH A 20 521 20 HOH HOH . C 3 HOH A 21 522 21 HOH HOH . C 3 HOH A 22 523 22 HOH HOH . C 3 HOH A 23 524 23 HOH HOH . C 3 HOH A 24 525 24 HOH HOH . C 3 HOH A 25 526 25 HOH HOH . C 3 HOH A 26 527 26 HOH HOH . C 3 HOH A 27 528 27 HOH HOH . C 3 HOH A 28 529 28 HOH HOH . C 3 HOH A 29 530 29 HOH HOH . C 3 HOH A 30 531 30 HOH HOH . C 3 HOH A 31 532 31 HOH HOH . C 3 HOH A 32 533 32 HOH HOH . C 3 HOH A 33 534 33 HOH HOH . C 3 HOH A 34 535 34 HOH HOH . C 3 HOH A 35 536 35 HOH HOH . C 3 HOH A 36 537 36 HOH HOH . C 3 HOH A 37 538 37 HOH HOH . C 3 HOH A 38 539 38 HOH HOH . C 3 HOH A 39 540 40 HOH HOH . C 3 HOH A 40 541 41 HOH HOH . C 3 HOH A 41 542 42 HOH HOH . C 3 HOH A 42 543 43 HOH HOH . C 3 HOH A 43 544 44 HOH HOH . C 3 HOH A 44 545 45 HOH HOH . C 3 HOH A 45 546 46 HOH HOH . C 3 HOH A 46 547 47 HOH HOH . C 3 HOH A 47 548 48 HOH HOH . C 3 HOH A 48 549 49 HOH HOH . C 3 HOH A 49 550 50 HOH HOH . C 3 HOH A 50 551 51 HOH HOH . C 3 HOH A 51 552 52 HOH HOH . C 3 HOH A 52 553 53 HOH HOH . C 3 HOH A 53 554 54 HOH HOH . C 3 HOH A 54 555 55 HOH HOH . C 3 HOH A 55 556 56 HOH HOH . C 3 HOH A 56 557 57 HOH HOH . C 3 HOH A 57 558 58 HOH HOH . C 3 HOH A 58 559 59 HOH HOH . C 3 HOH A 59 560 60 HOH HOH . C 3 HOH A 60 561 61 HOH HOH . C 3 HOH A 61 562 62 HOH HOH . C 3 HOH A 62 563 63 HOH HOH . C 3 HOH A 63 564 64 HOH HOH . C 3 HOH A 64 565 65 HOH HOH . C 3 HOH A 65 566 66 HOH HOH . C 3 HOH A 66 567 67 HOH HOH . C 3 HOH A 67 568 68 HOH HOH . C 3 HOH A 68 569 69 HOH HOH . C 3 HOH A 69 570 70 HOH HOH . C 3 HOH A 70 571 71 HOH HOH . C 3 HOH A 71 572 72 HOH HOH . C 3 HOH A 72 573 73 HOH HOH . C 3 HOH A 73 574 74 HOH HOH . C 3 HOH A 74 575 75 HOH HOH . C 3 HOH A 75 576 76 HOH HOH . C 3 HOH A 76 577 77 HOH HOH . C 3 HOH A 77 578 78 HOH HOH . C 3 HOH A 78 579 79 HOH HOH . C 3 HOH A 79 580 80 HOH HOH . C 3 HOH A 80 581 81 HOH HOH . C 3 HOH A 81 582 83 HOH HOH . C 3 HOH A 82 583 84 HOH HOH . C 3 HOH A 83 584 85 HOH HOH . C 3 HOH A 84 585 86 HOH HOH . C 3 HOH A 85 586 87 HOH HOH . C 3 HOH A 86 587 88 HOH HOH . C 3 HOH A 87 588 89 HOH HOH . C 3 HOH A 88 589 90 HOH HOH . C 3 HOH A 89 590 91 HOH HOH . C 3 HOH A 90 591 92 HOH HOH . C 3 HOH A 91 592 93 HOH HOH . C 3 HOH A 92 593 94 HOH HOH . C 3 HOH A 93 594 95 HOH HOH . C 3 HOH A 94 595 96 HOH HOH . C 3 HOH A 95 596 98 HOH HOH . C 3 HOH A 96 597 99 HOH HOH . C 3 HOH A 97 598 100 HOH HOH . C 3 HOH A 98 599 101 HOH HOH . C 3 HOH A 99 600 102 HOH HOH . C 3 HOH A 100 601 104 HOH HOH . C 3 HOH A 101 602 106 HOH HOH . C 3 HOH A 102 603 108 HOH HOH . C 3 HOH A 103 604 110 HOH HOH . C 3 HOH A 104 605 111 HOH HOH . C 3 HOH A 105 606 113 HOH HOH . C 3 HOH A 106 607 114 HOH HOH . C 3 HOH A 107 608 115 HOH HOH . C 3 HOH A 108 609 116 HOH HOH . C 3 HOH A 109 610 117 HOH HOH . C 3 HOH A 110 611 118 HOH HOH . C 3 HOH A 111 612 119 HOH HOH . C 3 HOH A 112 613 120 HOH HOH . C 3 HOH A 113 614 121 HOH HOH . C 3 HOH A 114 615 122 HOH HOH . C 3 HOH A 115 616 123 HOH HOH . C 3 HOH A 116 617 124 HOH HOH . C 3 HOH A 117 618 125 HOH HOH . C 3 HOH A 118 619 126 HOH HOH . C 3 HOH A 119 620 127 HOH HOH . C 3 HOH A 120 621 128 HOH HOH . C 3 HOH A 121 622 129 HOH HOH . C 3 HOH A 122 623 130 HOH HOH . C 3 HOH A 123 624 131 HOH HOH . C 3 HOH A 124 625 132 HOH HOH . C 3 HOH A 125 626 133 HOH HOH . C 3 HOH A 126 627 134 HOH HOH . C 3 HOH A 127 628 135 HOH HOH . C 3 HOH A 128 629 136 HOH HOH . C 3 HOH A 129 630 137 HOH HOH . C 3 HOH A 130 631 138 HOH HOH . C 3 HOH A 131 632 139 HOH HOH . C 3 HOH A 132 633 140 HOH HOH . C 3 HOH A 133 634 141 HOH HOH . C 3 HOH A 134 635 143 HOH HOH . C 3 HOH A 135 636 144 HOH HOH . C 3 HOH A 136 637 146 HOH HOH . C 3 HOH A 137 638 147 HOH HOH . C 3 HOH A 138 639 148 HOH HOH . C 3 HOH A 139 640 149 HOH HOH . C 3 HOH A 140 641 150 HOH HOH . C 3 HOH A 141 642 152 HOH HOH . C 3 HOH A 142 643 153 HOH HOH . C 3 HOH A 143 644 155 HOH HOH . C 3 HOH A 144 645 156 HOH HOH . C 3 HOH A 145 646 157 HOH HOH . C 3 HOH A 146 647 158 HOH HOH . C 3 HOH A 147 648 159 HOH HOH . C 3 HOH A 148 649 161 HOH HOH . C 3 HOH A 149 650 162 HOH HOH . C 3 HOH A 150 651 163 HOH HOH . C 3 HOH A 151 652 164 HOH HOH . C 3 HOH A 152 653 165 HOH HOH . C 3 HOH A 153 654 167 HOH HOH . C 3 HOH A 154 655 168 HOH HOH . C 3 HOH A 155 656 171 HOH HOH . C 3 HOH A 156 657 173 HOH HOH . C 3 HOH A 157 658 175 HOH HOH . C 3 HOH A 158 659 176 HOH HOH . C 3 HOH A 159 660 177 HOH HOH . C 3 HOH A 160 661 178 HOH HOH . C 3 HOH A 161 662 180 HOH HOH . C 3 HOH A 162 663 182 HOH HOH . C 3 HOH A 163 664 185 HOH HOH . C 3 HOH A 164 665 186 HOH HOH . C 3 HOH A 165 666 187 HOH HOH . C 3 HOH A 166 667 188 HOH HOH . C 3 HOH A 167 668 189 HOH HOH . C 3 HOH A 168 669 191 HOH HOH . C 3 HOH A 169 670 193 HOH HOH . C 3 HOH A 170 671 196 HOH HOH . C 3 HOH A 171 672 197 HOH HOH . C 3 HOH A 172 673 204 HOH HOH . C 3 HOH A 173 674 205 HOH HOH . C 3 HOH A 174 675 208 HOH HOH . C 3 HOH A 175 676 209 HOH HOH . C 3 HOH A 176 677 211 HOH HOH . C 3 HOH A 177 678 215 HOH HOH . C 3 HOH A 178 679 217 HOH HOH . C 3 HOH A 179 680 218 HOH HOH . C 3 HOH A 180 681 219 HOH HOH . C 3 HOH A 181 682 222 HOH HOH . C 3 HOH A 182 683 226 HOH HOH . C 3 HOH A 183 684 227 HOH HOH . C 3 HOH A 184 685 228 HOH HOH . C 3 HOH A 185 686 229 HOH HOH . C 3 HOH A 186 687 230 HOH HOH . C 3 HOH A 187 688 231 HOH HOH . C 3 HOH A 188 689 232 HOH HOH . C 3 HOH A 189 690 233 HOH HOH . C 3 HOH A 190 691 234 HOH HOH . C 3 HOH A 191 692 236 HOH HOH . C 3 HOH A 192 693 237 HOH HOH . C 3 HOH A 193 694 238 HOH HOH . C 3 HOH A 194 695 239 HOH HOH . C 3 HOH A 195 696 240 HOH HOH . C 3 HOH A 196 697 241 HOH HOH . C 3 HOH A 197 698 242 HOH HOH . C 3 HOH A 198 699 243 HOH HOH . C 3 HOH A 199 700 244 HOH HOH . C 3 HOH A 200 701 245 HOH HOH . C 3 HOH A 201 702 247 HOH HOH . C 3 HOH A 202 703 248 HOH HOH . C 3 HOH A 203 704 249 HOH HOH . C 3 HOH A 204 705 250 HOH HOH . C 3 HOH A 205 706 251 HOH HOH . C 3 HOH A 206 707 252 HOH HOH . C 3 HOH A 207 708 253 HOH HOH . C 3 HOH A 208 709 254 HOH HOH . C 3 HOH A 209 710 255 HOH HOH . C 3 HOH A 210 711 256 HOH HOH . C 3 HOH A 211 712 257 HOH HOH . C 3 HOH A 212 713 258 HOH HOH . C 3 HOH A 213 714 259 HOH HOH . C 3 HOH A 214 715 260 HOH HOH . C 3 HOH A 215 716 261 HOH HOH . C 3 HOH A 216 717 262 HOH HOH . C 3 HOH A 217 718 263 HOH HOH . C 3 HOH A 218 719 264 HOH HOH . C 3 HOH A 219 720 265 HOH HOH . C 3 HOH A 220 721 268 HOH HOH . C 3 HOH A 221 722 269 HOH HOH . C 3 HOH A 222 723 270 HOH HOH . C 3 HOH A 223 724 271 HOH HOH . C 3 HOH A 224 725 272 HOH HOH . C 3 HOH A 225 726 274 HOH HOH . C 3 HOH A 226 727 275 HOH HOH . C 3 HOH A 227 728 276 HOH HOH . C 3 HOH A 228 729 277 HOH HOH . C 3 HOH A 229 730 278 HOH HOH . C 3 HOH A 230 731 279 HOH HOH . C 3 HOH A 231 732 280 HOH HOH . C 3 HOH A 232 733 281 HOH HOH . C 3 HOH A 233 734 283 HOH HOH . C 3 HOH A 234 735 284 HOH HOH . C 3 HOH A 235 736 285 HOH HOH . C 3 HOH A 236 737 286 HOH HOH . C 3 HOH A 237 738 287 HOH HOH . C 3 HOH A 238 739 288 HOH HOH . C 3 HOH A 239 740 289 HOH HOH . C 3 HOH A 240 741 290 HOH HOH . C 3 HOH A 241 742 291 HOH HOH . C 3 HOH A 242 743 292 HOH HOH . C 3 HOH A 243 744 293 HOH HOH . C 3 HOH A 244 745 294 HOH HOH . C 3 HOH A 245 746 295 HOH HOH . C 3 HOH A 246 747 296 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 50.431 _atom_site.Cartn_y 47.302 _atom_site.Cartn_z 21.261 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #