data_1VFR
#
_model_server_result.job_id            PoyWXRF8vlW7jLBHf12IqQ 
_model_server_result.datetime_utc      '2025-09-17 18:05:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1vfr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":454}' 
#
_entry.id    1VFR 
#
_exptl.entry_id    1VFR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100 
_cell.angle_gamma         90 
_cell.entry_id            1VFR 
_cell.length_a            101.6 
_cell.length_b            63.3 
_cell.length_c            74.4 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1VFR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     1VFR 
_atom_sites.fract_transf_matrix[1][1]    0.009843 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001736 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015798 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013648 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FMN A 1 454 454 FMN FMN . 
D 2 FMN B 1 454 454 FMN FMN . 
E 3 HOH A 1 455 1 HOH HOH . 
E 3 HOH A 2 456 2 HOH HOH . 
E 3 HOH A 3 457 3 HOH HOH . 
E 3 HOH A 4 458 4 HOH HOH . 
E 3 HOH A 5 459 5 HOH HOH . 
E 3 HOH A 6 460 6 HOH HOH . 
E 3 HOH A 7 461 7 HOH HOH . 
E 3 HOH A 8 462 8 HOH HOH . 
E 3 HOH A 9 463 9 HOH HOH . 
E 3 HOH A 10 464 10 HOH HOH . 
E 3 HOH A 11 465 11 HOH HOH . 
E 3 HOH A 12 466 12 HOH HOH . 
E 3 HOH A 13 467 13 HOH HOH . 
E 3 HOH A 14 468 14 HOH HOH . 
E 3 HOH A 15 469 15 HOH HOH . 
E 3 HOH A 16 470 18 HOH HOH . 
E 3 HOH A 17 471 19 HOH HOH . 
E 3 HOH A 18 472 20 HOH HOH . 
E 3 HOH A 19 473 21 HOH HOH . 
E 3 HOH A 20 474 22 HOH HOH . 
E 3 HOH A 21 475 24 HOH HOH . 
E 3 HOH A 22 476 25 HOH HOH . 
E 3 HOH A 23 477 26 HOH HOH . 
E 3 HOH A 24 478 27 HOH HOH . 
E 3 HOH A 25 479 28 HOH HOH . 
E 3 HOH A 26 480 29 HOH HOH . 
E 3 HOH A 27 481 30 HOH HOH . 
E 3 HOH A 28 482 31 HOH HOH . 
E 3 HOH A 29 483 32 HOH HOH . 
E 3 HOH A 30 484 33 HOH HOH . 
E 3 HOH A 31 485 34 HOH HOH . 
E 3 HOH A 32 486 35 HOH HOH . 
E 3 HOH A 33 487 36 HOH HOH . 
E 3 HOH A 34 488 37 HOH HOH . 
E 3 HOH A 35 489 38 HOH HOH . 
E 3 HOH A 36 490 39 HOH HOH . 
E 3 HOH A 37 491 40 HOH HOH . 
E 3 HOH A 38 492 41 HOH HOH . 
E 3 HOH A 39 493 42 HOH HOH . 
E 3 HOH A 40 494 43 HOH HOH . 
E 3 HOH A 41 495 44 HOH HOH . 
E 3 HOH A 42 496 45 HOH HOH . 
E 3 HOH A 43 497 46 HOH HOH . 
E 3 HOH A 44 498 47 HOH HOH . 
E 3 HOH A 45 499 48 HOH HOH . 
E 3 HOH A 46 500 49 HOH HOH . 
E 3 HOH A 47 501 50 HOH HOH . 
E 3 HOH A 48 502 51 HOH HOH . 
E 3 HOH A 49 503 52 HOH HOH . 
E 3 HOH A 50 504 53 HOH HOH . 
E 3 HOH A 51 505 54 HOH HOH . 
E 3 HOH A 52 506 60 HOH HOH . 
E 3 HOH A 53 507 61 HOH HOH . 
E 3 HOH A 54 508 62 HOH HOH . 
E 3 HOH A 55 509 63 HOH HOH . 
E 3 HOH A 56 510 64 HOH HOH . 
E 3 HOH A 57 511 85 HOH HOH . 
E 3 HOH A 58 512 87 HOH HOH . 
E 3 HOH A 59 513 88 HOH HOH . 
E 3 HOH A 60 514 89 HOH HOH . 
E 3 HOH A 61 515 93 HOH HOH . 
E 3 HOH A 62 516 94 HOH HOH . 
E 3 HOH A 63 517 97 HOH HOH . 
E 3 HOH A 64 518 105 HOH HOH . 
E 3 HOH A 65 519 106 HOH HOH . 
E 3 HOH A 66 520 111 HOH HOH . 
E 3 HOH A 67 521 112 HOH HOH . 
E 3 HOH A 68 522 113 HOH HOH . 
E 3 HOH A 69 523 114 HOH HOH . 
E 3 HOH A 70 524 115 HOH HOH . 
E 3 HOH A 71 525 116 HOH HOH . 
E 3 HOH A 72 526 117 HOH HOH . 
E 3 HOH A 73 527 118 HOH HOH . 
E 3 HOH A 74 528 119 HOH HOH . 
E 3 HOH A 75 529 120 HOH HOH . 
E 3 HOH A 76 530 121 HOH HOH . 
E 3 HOH A 77 531 122 HOH HOH . 
E 3 HOH A 78 532 130 HOH HOH . 
E 3 HOH A 79 533 132 HOH HOH . 
E 3 HOH A 80 534 133 HOH HOH . 
E 3 HOH A 81 535 134 HOH HOH . 
E 3 HOH A 82 536 135 HOH HOH . 
E 3 HOH A 83 537 136 HOH HOH . 
E 3 HOH A 84 538 138 HOH HOH . 
E 3 HOH A 85 539 139 HOH HOH . 
E 3 HOH A 86 540 140 HOH HOH . 
E 3 HOH A 87 541 141 HOH HOH . 
E 3 HOH A 88 542 142 HOH HOH . 
E 3 HOH A 89 543 143 HOH HOH . 
E 3 HOH A 90 544 144 HOH HOH . 
E 3 HOH A 91 545 160 HOH HOH . 
E 3 HOH A 92 546 163 HOH HOH . 
E 3 HOH A 93 547 165 HOH HOH . 
E 3 HOH A 94 548 167 HOH HOH . 
E 3 HOH A 95 549 169 HOH HOH . 
E 3 HOH A 96 550 176 HOH HOH . 
E 3 HOH A 97 551 177 HOH HOH . 
E 3 HOH A 98 552 179 HOH HOH . 
E 3 HOH A 99 553 180 HOH HOH . 
E 3 HOH A 100 554 183 HOH HOH . 
F 3 HOH B 1 455 16 HOH HOH . 
F 3 HOH B 2 456 17 HOH HOH . 
F 3 HOH B 3 457 23 HOH HOH . 
F 3 HOH B 4 458 55 HOH HOH . 
F 3 HOH B 5 459 56 HOH HOH . 
F 3 HOH B 6 460 57 HOH HOH . 
F 3 HOH B 7 461 58 HOH HOH . 
F 3 HOH B 8 462 59 HOH HOH . 
F 3 HOH B 9 463 65 HOH HOH . 
F 3 HOH B 10 464 66 HOH HOH . 
F 3 HOH B 11 465 67 HOH HOH . 
F 3 HOH B 12 466 68 HOH HOH . 
F 3 HOH B 13 467 69 HOH HOH . 
F 3 HOH B 14 468 70 HOH HOH . 
F 3 HOH B 15 469 71 HOH HOH . 
F 3 HOH B 16 470 72 HOH HOH . 
F 3 HOH B 17 471 73 HOH HOH . 
F 3 HOH B 18 472 74 HOH HOH . 
F 3 HOH B 19 473 75 HOH HOH . 
F 3 HOH B 20 474 76 HOH HOH . 
F 3 HOH B 21 475 77 HOH HOH . 
F 3 HOH B 22 476 78 HOH HOH . 
F 3 HOH B 23 477 79 HOH HOH . 
F 3 HOH B 24 478 80 HOH HOH . 
F 3 HOH B 25 479 81 HOH HOH . 
F 3 HOH B 26 480 82 HOH HOH . 
F 3 HOH B 27 481 83 HOH HOH . 
F 3 HOH B 28 482 84 HOH HOH . 
F 3 HOH B 29 483 86 HOH HOH . 
F 3 HOH B 30 484 90 HOH HOH . 
F 3 HOH B 31 485 91 HOH HOH . 
F 3 HOH B 32 486 92 HOH HOH . 
F 3 HOH B 33 487 95 HOH HOH . 
F 3 HOH B 34 488 96 HOH HOH . 
F 3 HOH B 35 489 98 HOH HOH . 
F 3 HOH B 36 490 99 HOH HOH . 
F 3 HOH B 37 491 100 HOH HOH . 
F 3 HOH B 38 492 101 HOH HOH . 
F 3 HOH B 39 493 102 HOH HOH . 
F 3 HOH B 40 494 103 HOH HOH . 
F 3 HOH B 41 495 104 HOH HOH . 
F 3 HOH B 42 496 107 HOH HOH . 
F 3 HOH B 43 497 108 HOH HOH . 
F 3 HOH B 44 498 109 HOH HOH . 
F 3 HOH B 45 499 110 HOH HOH . 
F 3 HOH B 46 500 123 HOH HOH . 
F 3 HOH B 47 501 124 HOH HOH . 
F 3 HOH B 48 502 125 HOH HOH . 
F 3 HOH B 49 503 126 HOH HOH . 
F 3 HOH B 50 504 127 HOH HOH . 
F 3 HOH B 51 505 128 HOH HOH . 
F 3 HOH B 52 506 129 HOH HOH . 
F 3 HOH B 53 507 131 HOH HOH . 
F 3 HOH B 54 508 137 HOH HOH . 
F 3 HOH B 55 509 145 HOH HOH . 
F 3 HOH B 56 510 146 HOH HOH . 
F 3 HOH B 57 511 147 HOH HOH . 
F 3 HOH B 58 512 148 HOH HOH . 
F 3 HOH B 59 513 149 HOH HOH . 
F 3 HOH B 60 514 150 HOH HOH . 
F 3 HOH B 61 515 151 HOH HOH . 
F 3 HOH B 62 516 152 HOH HOH . 
F 3 HOH B 63 517 153 HOH HOH . 
F 3 HOH B 64 518 154 HOH HOH . 
F 3 HOH B 65 519 155 HOH HOH . 
F 3 HOH B 66 520 156 HOH HOH . 
F 3 HOH B 67 521 157 HOH HOH . 
F 3 HOH B 68 522 158 HOH HOH . 
F 3 HOH B 69 523 159 HOH HOH . 
F 3 HOH B 70 524 161 HOH HOH . 
F 3 HOH B 71 525 162 HOH HOH . 
F 3 HOH B 72 526 164 HOH HOH . 
F 3 HOH B 73 527 166 HOH HOH . 
F 3 HOH B 74 528 168 HOH HOH . 
F 3 HOH B 75 529 170 HOH HOH . 
F 3 HOH B 76 530 171 HOH HOH . 
F 3 HOH B 77 531 172 HOH HOH . 
F 3 HOH B 78 532 173 HOH HOH . 
F 3 HOH B 79 533 174 HOH HOH . 
F 3 HOH B 80 534 175 HOH HOH . 
F 3 HOH B 81 535 178 HOH HOH . 
F 3 HOH B 82 536 181 HOH HOH . 
F 3 HOH B 83 537 182 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . C 2 60.634 31.167 18.799 1 7.45 ? N1 FMN 454 A 1 
HETATM 2 C C2 FMN . . . C 2 59.949 32.066 19.607 1 8.24 ? C2 FMN 454 A 1 
HETATM 3 O O2 FMN . . . C 2 59.529 33.124 19.181 1 10.06 ? O2 FMN 454 A 1 
HETATM 4 N N3 FMN . . . C 2 60.065 31.783 20.984 1 8.15 ? N3 FMN 454 A 1 
HETATM 5 C C4 FMN . . . C 2 60.641 30.654 21.546 1 8.27 ? C4 FMN 454 A 1 
HETATM 6 O O4 FMN . . . C 2 60.615 30.525 22.779 1 8.75 ? O4 FMN 454 A 1 
HETATM 7 C C4A FMN . . . C 2 61.265 29.768 20.566 1 7.72 ? C4A FMN 454 A 1 
HETATM 8 N N5 FMN . . . C 2 61.746 28.583 21.063 1 6.55 ? N5 FMN 454 A 1 
HETATM 9 C C5A FMN . . . C 2 62.081 27.563 20.223 1 7.84 ? C5A FMN 454 A 1 
HETATM 10 C C6 FMN . . . C 2 62.403 26.352 20.753 1 7.03 ? C6 FMN 454 A 1 
HETATM 11 C C7 FMN . . . C 2 62.622 25.296 19.887 1 9.22 ? C7 FMN 454 A 1 
HETATM 12 C C7M FMN . . . C 2 62.952 23.936 20.452 1 7.57 ? C7M FMN 454 A 1 
HETATM 13 C C8 FMN . . . C 2 62.501 25.473 18.485 1 7.65 ? C8 FMN 454 A 1 
HETATM 14 C C8M FMN . . . C 2 62.543 24.307 17.504 1 7.32 ? C8M FMN 454 A 1 
HETATM 15 C C9 FMN . . . C 2 62.257 26.696 17.968 1 7.17 ? C9 FMN 454 A 1 
HETATM 16 C C9A FMN . . . C 2 62.032 27.768 18.82 1 5.71 ? C9A FMN 454 A 1 
HETATM 17 N N10 FMN . . . C 2 61.662 28.988 18.332 1 7.31 ? N10 FMN 454 A 1 
HETATM 18 C C10 FMN . . . C 2 61.215 29.979 19.163 1 7.39 ? C10 FMN 454 A 1 
HETATM 19 C C1' FMN . . . C 2 61.692 29.303 16.982 1 7.19 ? C1' FMN 454 A 1 
HETATM 20 C C2' FMN . . . C 2 63.064 29.242 16.322 1 7.87 ? C2' FMN 454 A 1 
HETATM 21 O O2' FMN . . . C 2 63.704 30.459 16.551 1 7.33 ? O2' FMN 454 A 1 
HETATM 22 C C3' FMN . . . C 2 62.929 28.904 14.811 1 4.28 ? C3' FMN 454 A 1 
HETATM 23 O O3' FMN . . . C 2 62.389 27.574 14.713 1 7.18 ? O3' FMN 454 A 1 
HETATM 24 C C4' FMN . . . C 2 64.315 28.93 14.101 1 7.1 ? C4' FMN 454 A 1 
HETATM 25 O O4' FMN . . . C 2 64.764 30.317 14.089 1 9.79 ? O4' FMN 454 A 1 
HETATM 26 C C5' FMN . . . C 2 64.129 28.519 12.638 1 7.37 ? C5' FMN 454 A 1 
HETATM 27 O O5' FMN . . . C 2 63.094 29.34 11.974 1 8.09 ? O5' FMN 454 A 1 
HETATM 28 P P FMN . . . C 2 61.688 28.873 11.363 1 8.21 ? P FMN 454 A 1 
HETATM 29 O O1P FMN . . . C 2 61.192 30.218 11.068 1 7.12 ? O1P FMN 454 A 1 
HETATM 30 O O2P FMN . . . C 2 61.152 28.105 12.495 1 7.89 ? O2P FMN 454 A 1 
HETATM 31 O O3P FMN . . . C 2 62.151 28.027 10.287 1 8.27 ? O3P FMN 454 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#