data_1VHO # _model_server_result.job_id M-52EW8NtWI0sNse3oTZ1A _model_server_result.datetime_utc '2024-11-02 13:39:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vho # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":350}' # _entry.id 1VHO # _exptl.entry_id 1VHO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 136.989 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CACODYLATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VHO _cell.length_a 120.453 _cell.length_b 120.453 _cell.length_c 57.627 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VHO _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 5 A MSE 3 1_555 A N GLU 6 A GLU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A C LEU 11 A LEU 9 1_555 A N MSE 12 A MSE 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale3 A C MSE 12 A MSE 10 1_555 A N GLU 13 A GLU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale4 A C GLY 115 A GLY 113 1_555 A N MSE 116 A MSE 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale5 A C MSE 116 A MSE 114 1_555 A N LEU 117 A LEU 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 A C VAL 225 A VAL 223 1_555 A N MSE 226 A MSE 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale7 A C MSE 226 A MSE 224 1_555 A N ASP 227 A ASP 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale8 A C TYR 307 A TYR 305 1_555 A N MSE 308 A MSE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale9 A C MSE 308 A MSE 306 1_555 A N HIS 309 A HIS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale10 A C GLU 313 A GLU 311 1_555 A N MSE 314 A MSE 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale11 A C MSE 314 A MSE 312 1_555 A N VAL 315 A VAL 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? metalc ? metalc1 A SG CYS 143 A CYS 141 1_555 B AS CAC . A CAC 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc2 A SG CYS 208 A CYS 206 1_555 C AS CAC . A CAC 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? # _chem_comp.formula 'C2 H6 As O2 -1' _chem_comp.formula_weight 136.989 _chem_comp.id CAC _chem_comp.mon_nstd_flag . _chem_comp.name 'CACODYLATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms dimethylarsinate # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag AS O1 CAC doub 70 n n AS O2 CAC sing 71 n n AS C1 CAC sing 72 n n AS C2 CAC sing 73 n n C1 H11 CAC sing 74 n n C1 H12 CAC sing 75 n n C1 H13 CAC sing 76 n n C2 H21 CAC sing 77 n n C2 H22 CAC sing 78 n n C2 H23 CAC sing 79 n n # _atom_sites.entry_id 1VHO _atom_sites.fract_transf_matrix[1][1] 0.008302 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008302 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017353 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CAC A 1 350 1 CAC CAC . C 2 CAC A 1 351 2 CAC CAC . D 3 SO4 A 1 352 3 SO4 SO4 . E 3 SO4 A 1 353 4 SO4 SO4 . F 4 HOH A 1 354 5 HOH HOH . F 4 HOH A 2 355 6 HOH HOH . F 4 HOH A 3 356 7 HOH HOH . F 4 HOH A 4 357 8 HOH HOH . F 4 HOH A 5 358 9 HOH HOH . F 4 HOH A 6 359 10 HOH HOH . F 4 HOH A 7 360 11 HOH HOH . F 4 HOH A 8 361 12 HOH HOH . F 4 HOH A 9 362 13 HOH HOH . F 4 HOH A 10 363 14 HOH HOH . F 4 HOH A 11 364 15 HOH HOH . F 4 HOH A 12 365 16 HOH HOH . F 4 HOH A 13 366 17 HOH HOH . F 4 HOH A 14 367 18 HOH HOH . F 4 HOH A 15 368 19 HOH HOH . F 4 HOH A 16 369 20 HOH HOH . F 4 HOH A 17 370 21 HOH HOH . F 4 HOH A 18 371 22 HOH HOH . F 4 HOH A 19 372 23 HOH HOH . F 4 HOH A 20 373 24 HOH HOH . F 4 HOH A 21 374 25 HOH HOH . F 4 HOH A 22 375 26 HOH HOH . F 4 HOH A 23 376 27 HOH HOH . F 4 HOH A 24 377 28 HOH HOH . F 4 HOH A 25 378 29 HOH HOH . F 4 HOH A 26 379 30 HOH HOH . F 4 HOH A 27 380 31 HOH HOH . F 4 HOH A 28 381 32 HOH HOH . F 4 HOH A 29 382 33 HOH HOH . F 4 HOH A 30 383 34 HOH HOH . F 4 HOH A 31 384 35 HOH HOH . F 4 HOH A 32 385 36 HOH HOH . F 4 HOH A 33 386 37 HOH HOH . F 4 HOH A 34 387 38 HOH HOH . F 4 HOH A 35 388 39 HOH HOH . F 4 HOH A 36 389 40 HOH HOH . F 4 HOH A 37 390 41 HOH HOH . F 4 HOH A 38 391 42 HOH HOH . F 4 HOH A 39 392 43 HOH HOH . F 4 HOH A 40 393 44 HOH HOH . F 4 HOH A 41 394 45 HOH HOH . F 4 HOH A 42 395 46 HOH HOH . F 4 HOH A 43 396 47 HOH HOH . F 4 HOH A 44 397 48 HOH HOH . F 4 HOH A 45 398 49 HOH HOH . F 4 HOH A 46 399 50 HOH HOH . F 4 HOH A 47 400 51 HOH HOH . F 4 HOH A 48 401 52 HOH HOH . F 4 HOH A 49 402 53 HOH HOH . F 4 HOH A 50 403 54 HOH HOH . F 4 HOH A 51 404 55 HOH HOH . F 4 HOH A 52 405 56 HOH HOH . F 4 HOH A 53 406 57 HOH HOH . F 4 HOH A 54 407 58 HOH HOH . F 4 HOH A 55 408 59 HOH HOH . F 4 HOH A 56 409 60 HOH HOH . F 4 HOH A 57 410 61 HOH HOH . F 4 HOH A 58 411 62 HOH HOH . F 4 HOH A 59 412 63 HOH HOH . F 4 HOH A 60 413 64 HOH HOH . F 4 HOH A 61 414 65 HOH HOH . F 4 HOH A 62 415 66 HOH HOH . F 4 HOH A 63 416 67 HOH HOH . F 4 HOH A 64 417 68 HOH HOH . F 4 HOH A 65 418 69 HOH HOH . F 4 HOH A 66 419 70 HOH HOH . F 4 HOH A 67 420 71 HOH HOH . F 4 HOH A 68 421 72 HOH HOH . F 4 HOH A 69 422 73 HOH HOH . F 4 HOH A 70 423 74 HOH HOH . F 4 HOH A 71 424 75 HOH HOH . F 4 HOH A 72 425 76 HOH HOH . F 4 HOH A 73 426 77 HOH HOH . F 4 HOH A 74 427 78 HOH HOH . F 4 HOH A 75 428 79 HOH HOH . F 4 HOH A 76 429 80 HOH HOH . F 4 HOH A 77 430 81 HOH HOH . F 4 HOH A 78 431 82 HOH HOH . F 4 HOH A 79 432 83 HOH HOH . F 4 HOH A 80 433 84 HOH HOH . F 4 HOH A 81 434 85 HOH HOH . F 4 HOH A 82 435 86 HOH HOH . F 4 HOH A 83 436 87 HOH HOH . F 4 HOH A 84 437 88 HOH HOH . F 4 HOH A 85 438 89 HOH HOH . F 4 HOH A 86 439 90 HOH HOH . F 4 HOH A 87 440 91 HOH HOH . F 4 HOH A 88 441 92 HOH HOH . F 4 HOH A 89 442 93 HOH HOH . F 4 HOH A 90 443 94 HOH HOH . F 4 HOH A 91 444 95 HOH HOH . F 4 HOH A 92 445 96 HOH HOH . F 4 HOH A 93 446 97 HOH HOH . F 4 HOH A 94 447 98 HOH HOH . F 4 HOH A 95 448 99 HOH HOH . F 4 HOH A 96 449 100 HOH HOH . F 4 HOH A 97 450 101 HOH HOH . F 4 HOH A 98 451 102 HOH HOH . F 4 HOH A 99 452 103 HOH HOH . F 4 HOH A 100 453 104 HOH HOH . F 4 HOH A 101 454 105 HOH HOH . F 4 HOH A 102 455 106 HOH HOH . F 4 HOH A 103 456 107 HOH HOH . F 4 HOH A 104 457 108 HOH HOH . F 4 HOH A 105 458 109 HOH HOH . F 4 HOH A 106 459 110 HOH HOH . F 4 HOH A 107 460 111 HOH HOH . F 4 HOH A 108 461 112 HOH HOH . F 4 HOH A 109 462 113 HOH HOH . F 4 HOH A 110 463 114 HOH HOH . F 4 HOH A 111 464 115 HOH HOH . F 4 HOH A 112 465 116 HOH HOH . F 4 HOH A 113 466 117 HOH HOH . F 4 HOH A 114 467 118 HOH HOH . F 4 HOH A 115 468 119 HOH HOH . F 4 HOH A 116 469 120 HOH HOH . F 4 HOH A 117 470 121 HOH HOH . F 4 HOH A 118 471 122 HOH HOH . F 4 HOH A 119 472 123 HOH HOH . F 4 HOH A 120 473 124 HOH HOH . F 4 HOH A 121 474 125 HOH HOH . F 4 HOH A 122 475 126 HOH HOH . F 4 HOH A 123 476 127 HOH HOH . F 4 HOH A 124 477 128 HOH HOH . F 4 HOH A 125 478 129 HOH HOH . F 4 HOH A 126 479 130 HOH HOH . F 4 HOH A 127 480 131 HOH HOH . F 4 HOH A 128 481 132 HOH HOH . F 4 HOH A 129 482 133 HOH HOH . F 4 HOH A 130 483 134 HOH HOH . F 4 HOH A 131 484 135 HOH HOH . F 4 HOH A 132 485 136 HOH HOH . F 4 HOH A 133 486 137 HOH HOH . F 4 HOH A 134 487 138 HOH HOH . F 4 HOH A 135 488 139 HOH HOH . F 4 HOH A 136 489 140 HOH HOH . F 4 HOH A 137 490 141 HOH HOH . F 4 HOH A 138 491 142 HOH HOH . F 4 HOH A 139 492 143 HOH HOH . F 4 HOH A 140 493 144 HOH HOH . F 4 HOH A 141 494 145 HOH HOH . F 4 HOH A 142 495 146 HOH HOH . F 4 HOH A 143 496 147 HOH HOH . F 4 HOH A 144 497 148 HOH HOH . F 4 HOH A 145 498 149 HOH HOH . F 4 HOH A 146 499 150 HOH HOH . F 4 HOH A 147 500 151 HOH HOH . F 4 HOH A 148 501 152 HOH HOH . F 4 HOH A 149 502 153 HOH HOH . F 4 HOH A 150 503 154 HOH HOH . F 4 HOH A 151 504 155 HOH HOH . F 4 HOH A 152 505 156 HOH HOH . F 4 HOH A 153 506 157 HOH HOH . F 4 HOH A 154 507 158 HOH HOH . F 4 HOH A 155 508 159 HOH HOH . F 4 HOH A 156 509 160 HOH HOH . F 4 HOH A 157 510 161 HOH HOH . F 4 HOH A 158 511 162 HOH HOH . F 4 HOH A 159 512 163 HOH HOH . F 4 HOH A 160 513 164 HOH HOH . F 4 HOH A 161 514 165 HOH HOH . F 4 HOH A 162 515 166 HOH HOH . F 4 HOH A 163 516 167 HOH HOH . F 4 HOH A 164 517 168 HOH HOH . F 4 HOH A 165 518 169 HOH HOH . F 4 HOH A 166 519 170 HOH HOH . F 4 HOH A 167 520 171 HOH HOH . F 4 HOH A 168 521 172 HOH HOH . F 4 HOH A 169 522 173 HOH HOH . F 4 HOH A 170 523 174 HOH HOH . F 4 HOH A 171 524 175 HOH HOH . F 4 HOH A 172 525 176 HOH HOH . F 4 HOH A 173 526 177 HOH HOH . F 4 HOH A 174 527 178 HOH HOH . F 4 HOH A 175 528 179 HOH HOH . F 4 HOH A 176 529 180 HOH HOH . F 4 HOH A 177 530 181 HOH HOH . F 4 HOH A 178 531 182 HOH HOH . F 4 HOH A 179 532 183 HOH HOH . F 4 HOH A 180 533 184 HOH HOH . F 4 HOH A 181 534 185 HOH HOH . F 4 HOH A 182 535 186 HOH HOH . F 4 HOH A 183 536 187 HOH HOH . F 4 HOH A 184 537 188 HOH HOH . F 4 HOH A 185 538 189 HOH HOH . F 4 HOH A 186 539 190 HOH HOH . F 4 HOH A 187 540 191 HOH HOH . F 4 HOH A 188 541 192 HOH HOH . F 4 HOH A 189 542 193 HOH HOH . F 4 HOH A 190 543 194 HOH HOH . F 4 HOH A 191 544 195 HOH HOH . F 4 HOH A 192 545 196 HOH HOH . F 4 HOH A 193 546 197 HOH HOH . F 4 HOH A 194 547 198 HOH HOH . F 4 HOH A 195 548 199 HOH HOH . F 4 HOH A 196 549 200 HOH HOH . F 4 HOH A 197 550 201 HOH HOH . F 4 HOH A 198 551 202 HOH HOH . F 4 HOH A 199 552 203 HOH HOH . F 4 HOH A 200 553 204 HOH HOH . F 4 HOH A 201 554 205 HOH HOH . F 4 HOH A 202 555 206 HOH HOH . F 4 HOH A 203 556 207 HOH HOH . F 4 HOH A 204 557 208 HOH HOH . F 4 HOH A 205 558 209 HOH HOH . F 4 HOH A 206 559 210 HOH HOH . F 4 HOH A 207 560 211 HOH HOH . F 4 HOH A 208 561 212 HOH HOH . F 4 HOH A 209 562 213 HOH HOH . F 4 HOH A 210 563 214 HOH HOH . F 4 HOH A 211 564 215 HOH HOH . F 4 HOH A 212 565 216 HOH HOH . F 4 HOH A 213 566 217 HOH HOH . F 4 HOH A 214 567 218 HOH HOH . F 4 HOH A 215 568 219 HOH HOH . F 4 HOH A 216 569 220 HOH HOH . F 4 HOH A 217 570 221 HOH HOH . F 4 HOH A 218 571 222 HOH HOH . F 4 HOH A 219 572 223 HOH HOH . F 4 HOH A 220 573 224 HOH HOH . F 4 HOH A 221 574 225 HOH HOH . F 4 HOH A 222 575 226 HOH HOH . F 4 HOH A 223 576 227 HOH HOH . F 4 HOH A 224 577 228 HOH HOH . F 4 HOH A 225 578 229 HOH HOH . F 4 HOH A 226 579 230 HOH HOH . F 4 HOH A 227 580 231 HOH HOH . F 4 HOH A 228 581 232 HOH HOH . F 4 HOH A 229 582 233 HOH HOH . F 4 HOH A 230 583 234 HOH HOH . F 4 HOH A 231 584 235 HOH HOH . F 4 HOH A 232 585 236 HOH HOH . F 4 HOH A 233 586 237 HOH HOH . F 4 HOH A 234 587 238 HOH HOH . F 4 HOH A 235 588 239 HOH HOH . F 4 HOH A 236 589 240 HOH HOH . F 4 HOH A 237 590 241 HOH HOH . F 4 HOH A 238 591 242 HOH HOH . F 4 HOH A 239 592 243 HOH HOH . F 4 HOH A 240 593 244 HOH HOH . F 4 HOH A 241 594 245 HOH HOH . F 4 HOH A 242 595 246 HOH HOH . F 4 HOH A 243 596 247 HOH HOH . F 4 HOH A 244 597 248 HOH HOH . F 4 HOH A 245 598 249 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 AS AS CAC . . . B 2 54.075 9.502 30.911 1 53.27 ? AS CAC 350 A 1 HETATM 2 O O1 CAC . . . B 2 52.337 9.479 31.56 1 53 ? O1 CAC 350 A 1 HETATM 3 C C1 CAC . . . B 2 54.12 7.989 29.69 1 52.82 ? C1 CAC 350 A 1 HETATM 4 C C2 CAC . . . B 2 54.123 11.031 29.63 1 51.17 ? C2 CAC 350 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 571 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 4 #