data_1VHR # _model_server_result.job_id B84dD4QU1s0yxe6DN8p7ig _model_server_result.datetime_utc '2024-10-22 21:46:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vhr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 1VHR # _exptl.entry_id 1VHR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.35 _cell.angle_gamma 90 _cell.entry_id 1VHR _cell.length_a 61.148 _cell.length_b 60.04 _cell.length_c 52.016 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VHR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 1VHR _atom_sites.fract_transf_matrix[1][1] 0.016354 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0024 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016656 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019431 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EPE A 1 401 401 EPE EPE . D 3 SO4 B 1 502 502 SO4 SO4 . E 4 HOH A 1 601 601 HOH HOH . E 4 HOH A 2 602 602 HOH HOH . E 4 HOH A 3 603 603 HOH HOH . E 4 HOH A 4 604 604 HOH HOH . E 4 HOH A 5 605 605 HOH HOH . E 4 HOH A 6 606 606 HOH HOH . E 4 HOH A 7 607 607 HOH HOH . E 4 HOH A 8 608 608 HOH HOH . E 4 HOH A 9 609 609 HOH HOH . E 4 HOH A 10 610 610 HOH HOH . E 4 HOH A 11 611 611 HOH HOH . E 4 HOH A 12 612 612 HOH HOH . E 4 HOH A 13 613 613 HOH HOH . E 4 HOH A 14 614 614 HOH HOH . E 4 HOH A 15 615 615 HOH HOH . E 4 HOH A 16 616 616 HOH HOH . E 4 HOH A 17 617 617 HOH HOH . E 4 HOH A 18 618 618 HOH HOH . E 4 HOH A 19 619 619 HOH HOH . E 4 HOH A 20 620 620 HOH HOH . E 4 HOH A 21 621 621 HOH HOH . E 4 HOH A 22 622 622 HOH HOH . E 4 HOH A 23 623 623 HOH HOH . E 4 HOH A 24 624 624 HOH HOH . E 4 HOH A 25 625 625 HOH HOH . E 4 HOH A 26 626 626 HOH HOH . E 4 HOH A 27 627 627 HOH HOH . E 4 HOH A 28 628 628 HOH HOH . E 4 HOH A 29 629 629 HOH HOH . E 4 HOH A 30 630 630 HOH HOH . E 4 HOH A 31 631 631 HOH HOH . E 4 HOH A 32 632 632 HOH HOH . E 4 HOH A 33 633 633 HOH HOH . E 4 HOH A 34 634 634 HOH HOH . E 4 HOH A 35 635 635 HOH HOH . E 4 HOH A 36 636 636 HOH HOH . E 4 HOH A 37 637 637 HOH HOH . E 4 HOH A 38 638 638 HOH HOH . E 4 HOH A 39 639 639 HOH HOH . E 4 HOH A 40 721 721 HOH HOH . E 4 HOH A 41 722 722 HOH HOH . E 4 HOH A 42 723 723 HOH HOH . E 4 HOH A 43 724 724 HOH HOH . E 4 HOH A 44 725 725 HOH HOH . E 4 HOH A 45 726 726 HOH HOH . E 4 HOH A 46 727 727 HOH HOH . E 4 HOH A 47 728 728 HOH HOH . E 4 HOH A 48 729 729 HOH HOH . E 4 HOH A 49 730 730 HOH HOH . E 4 HOH A 50 731 731 HOH HOH . E 4 HOH A 51 732 732 HOH HOH . E 4 HOH A 52 733 733 HOH HOH . E 4 HOH A 53 734 734 HOH HOH . E 4 HOH A 54 735 735 HOH HOH . E 4 HOH A 55 736 736 HOH HOH . E 4 HOH A 56 737 737 HOH HOH . E 4 HOH A 57 738 738 HOH HOH . E 4 HOH A 58 739 739 HOH HOH . F 4 HOH B 1 640 640 HOH HOH . F 4 HOH B 2 641 641 HOH HOH . F 4 HOH B 3 642 642 HOH HOH . F 4 HOH B 4 643 643 HOH HOH . F 4 HOH B 5 644 644 HOH HOH . F 4 HOH B 6 645 645 HOH HOH . F 4 HOH B 7 646 646 HOH HOH . F 4 HOH B 8 647 647 HOH HOH . F 4 HOH B 9 648 648 HOH HOH . F 4 HOH B 10 649 649 HOH HOH . F 4 HOH B 11 650 650 HOH HOH . F 4 HOH B 12 651 651 HOH HOH . F 4 HOH B 13 652 652 HOH HOH . F 4 HOH B 14 653 653 HOH HOH . F 4 HOH B 15 654 654 HOH HOH . F 4 HOH B 16 655 655 HOH HOH . F 4 HOH B 17 656 656 HOH HOH . F 4 HOH B 18 657 657 HOH HOH . F 4 HOH B 19 658 658 HOH HOH . F 4 HOH B 20 659 659 HOH HOH . F 4 HOH B 21 660 660 HOH HOH . F 4 HOH B 22 661 661 HOH HOH . F 4 HOH B 23 662 662 HOH HOH . F 4 HOH B 24 663 663 HOH HOH . F 4 HOH B 25 664 664 HOH HOH . F 4 HOH B 26 665 665 HOH HOH . F 4 HOH B 27 666 666 HOH HOH . F 4 HOH B 28 667 667 HOH HOH . F 4 HOH B 29 668 668 HOH HOH . F 4 HOH B 30 669 669 HOH HOH . F 4 HOH B 31 670 670 HOH HOH . F 4 HOH B 32 671 671 HOH HOH . F 4 HOH B 33 672 672 HOH HOH . F 4 HOH B 34 673 673 HOH HOH . F 4 HOH B 35 674 674 HOH HOH . F 4 HOH B 36 675 675 HOH HOH . F 4 HOH B 37 676 676 HOH HOH . F 4 HOH B 38 677 677 HOH HOH . F 4 HOH B 39 678 678 HOH HOH . F 4 HOH B 40 679 679 HOH HOH . F 4 HOH B 41 680 680 HOH HOH . F 4 HOH B 42 681 681 HOH HOH . F 4 HOH B 43 682 682 HOH HOH . F 4 HOH B 44 683 683 HOH HOH . F 4 HOH B 45 684 684 HOH HOH . F 4 HOH B 46 685 685 HOH HOH . F 4 HOH B 47 686 686 HOH HOH . F 4 HOH B 48 687 687 HOH HOH . F 4 HOH B 49 688 688 HOH HOH . F 4 HOH B 50 689 689 HOH HOH . F 4 HOH B 51 690 690 HOH HOH . F 4 HOH B 52 691 691 HOH HOH . F 4 HOH B 53 692 692 HOH HOH . F 4 HOH B 54 693 693 HOH HOH . F 4 HOH B 55 694 694 HOH HOH . F 4 HOH B 56 695 695 HOH HOH . F 4 HOH B 57 696 696 HOH HOH . F 4 HOH B 58 697 697 HOH HOH . F 4 HOH B 59 698 698 HOH HOH . F 4 HOH B 60 699 699 HOH HOH . F 4 HOH B 61 700 700 HOH HOH . F 4 HOH B 62 701 701 HOH HOH . F 4 HOH B 63 702 702 HOH HOH . F 4 HOH B 64 703 703 HOH HOH . F 4 HOH B 65 704 704 HOH HOH . F 4 HOH B 66 705 705 HOH HOH . F 4 HOH B 67 706 706 HOH HOH . F 4 HOH B 68 707 707 HOH HOH . F 4 HOH B 69 708 708 HOH HOH . F 4 HOH B 70 709 709 HOH HOH . F 4 HOH B 71 710 710 HOH HOH . F 4 HOH B 72 711 711 HOH HOH . F 4 HOH B 73 712 712 HOH HOH . F 4 HOH B 74 713 713 HOH HOH . F 4 HOH B 75 714 714 HOH HOH . F 4 HOH B 76 715 715 HOH HOH . F 4 HOH B 77 716 716 HOH HOH . F 4 HOH B 78 717 717 HOH HOH . F 4 HOH B 79 718 718 HOH HOH . F 4 HOH B 80 719 719 HOH HOH . F 4 HOH B 81 720 720 HOH HOH . F 4 HOH B 82 740 740 HOH HOH . F 4 HOH B 83 741 741 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . C 2 -7.267 13.442 -2.161 1 37.19 ? N1 EPE 401 A 1 HETATM 2 C C2 EPE . . . C 2 -8.525 12.802 -1.761 1 41.43 ? C2 EPE 401 A 1 HETATM 3 C C3 EPE . . . C 2 -9.453 12.617 -2.982 1 44.81 ? C3 EPE 401 A 1 HETATM 4 N N4 EPE . . . C 2 -8.777 11.93 -4.082 1 49.7 ? N4 EPE 401 A 1 HETATM 5 C C5 EPE . . . C 2 -7.587 12.686 -4.462 1 47.72 ? C5 EPE 401 A 1 HETATM 6 C C6 EPE . . . C 2 -6.631 12.77 -3.296 1 42.94 ? C6 EPE 401 A 1 HETATM 7 C C7 EPE . . . C 2 -9.642 11.651 -5.205 1 53.51 ? C7 EPE 401 A 1 HETATM 8 C C8 EPE . . . C 2 -9.095 10.534 -6.082 1 56.84 ? C8 EPE 401 A 1 HETATM 9 O O8 EPE . . . C 2 -9.614 10.658 -7.399 1 59.73 ? O8 EPE 401 A 1 HETATM 10 C C9 EPE . . . C 2 -6.338 13.399 -1.042 1 30.56 ? C9 EPE 401 A 1 HETATM 11 C C10 EPE . . . C 2 -5.421 14.587 -1.128 1 19.57 ? C10 EPE 401 A 1 HETATM 12 S S EPE . . . C 2 -4.151 14.588 0.162 1 8.76 ? S EPE 401 A 1 HETATM 13 O O1S EPE . . . C 2 -4.844 14.914 1.479 1 10.24 ? O1S EPE 401 A 1 HETATM 14 O O2S EPE . . . C 2 -3.178 15.591 -0.257 1 10.71 ? O2S EPE 401 A 1 HETATM 15 O O3S EPE . . . C 2 -3.559 13.218 0.219 1 6.98 ? O3S EPE 401 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #