data_1VIX # _model_server_result.job_id 8Y8J7IdIMXEEe8gymXCJtQ _model_server_result.datetime_utc '2024-11-09 02:47:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vix # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":424}' # _entry.id 1VIX # _exptl.entry_id 1VIX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1VIX _cell.length_a 115.27 _cell.length_b 145.787 _cell.length_c 77.121 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VIX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 80 A HIS 78 1_555 C ZN ZN . A ZN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc2 A OD2 ASP 142 A ASP 140 1_555 C ZN ZN . A ZN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc3 A OD1 ASP 142 A ASP 140 1_555 D ZN ZN . A ZN 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc4 A OE1 GLU 176 A GLU 174 1_555 D ZN ZN . A ZN 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc5 A OD1 ASP 198 A ASP 196 1_555 C ZN ZN . A ZN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc6 A OD2 ASP 198 A ASP 196 1_555 C ZN ZN . A ZN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc7 A NE2 HIS 381 A HIS 379 1_555 D ZN ZN . A ZN 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc8 B NE2 HIS 80 B HIS 78 1_555 K ZN ZN . B ZN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc9 B OD1 ASP 142 B ASP 140 1_555 K ZN ZN . B ZN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc10 B OD2 ASP 142 B ASP 140 1_555 K ZN ZN . B ZN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc11 B OD2 ASP 142 B ASP 140 1_555 L ZN ZN . B ZN 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc12 B OD1 ASP 198 B ASP 196 1_555 K ZN ZN . B ZN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc13 B OD2 ASP 198 B ASP 196 1_555 K ZN ZN . B ZN 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc14 B NE2 HIS 381 B HIS 379 1_555 L ZN ZN . B ZN 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 1VIX _atom_sites.fract_transf_matrix[1][1] 0.008675 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006859 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 419 1 ZN ZN . D 2 ZN A 1 420 2 ZN ZN . E 3 SO4 A 1 421 5 SO4 SO4 . F 3 SO4 A 1 422 6 SO4 SO4 . G 3 SO4 A 1 423 7 SO4 SO4 . H 3 SO4 A 1 424 10 SO4 SO4 . I 3 SO4 A 1 425 14 SO4 SO4 . J 3 SO4 A 1 426 15 SO4 SO4 . K 2 ZN B 1 419 3 ZN ZN . L 2 ZN B 1 420 4 ZN ZN . M 3 SO4 B 1 421 8 SO4 SO4 . N 3 SO4 B 1 422 9 SO4 SO4 . O 3 SO4 B 1 423 11 SO4 SO4 . P 3 SO4 B 1 424 12 SO4 SO4 . Q 3 SO4 B 1 425 13 SO4 SO4 . R 3 SO4 B 1 426 16 SO4 SO4 . S 4 HOH A 1 427 17 HOH HOH . S 4 HOH A 2 428 23 HOH HOH . S 4 HOH A 3 429 27 HOH HOH . S 4 HOH A 4 430 28 HOH HOH . S 4 HOH A 5 431 34 HOH HOH . S 4 HOH A 6 432 35 HOH HOH . S 4 HOH A 7 433 36 HOH HOH . S 4 HOH A 8 434 37 HOH HOH . S 4 HOH A 9 435 38 HOH HOH . S 4 HOH A 10 436 39 HOH HOH . S 4 HOH A 11 437 41 HOH HOH . S 4 HOH A 12 438 43 HOH HOH . S 4 HOH A 13 439 44 HOH HOH . S 4 HOH A 14 440 47 HOH HOH . S 4 HOH A 15 441 48 HOH HOH . S 4 HOH A 16 442 50 HOH HOH . S 4 HOH A 17 443 51 HOH HOH . S 4 HOH A 18 444 54 HOH HOH . S 4 HOH A 19 445 57 HOH HOH . S 4 HOH A 20 446 59 HOH HOH . S 4 HOH A 21 447 60 HOH HOH . S 4 HOH A 22 448 62 HOH HOH . S 4 HOH A 23 449 64 HOH HOH . S 4 HOH A 24 450 69 HOH HOH . S 4 HOH A 25 451 70 HOH HOH . S 4 HOH A 26 452 72 HOH HOH . S 4 HOH A 27 453 75 HOH HOH . S 4 HOH A 28 454 76 HOH HOH . S 4 HOH A 29 455 79 HOH HOH . S 4 HOH A 30 456 80 HOH HOH . S 4 HOH A 31 457 82 HOH HOH . S 4 HOH A 32 458 83 HOH HOH . S 4 HOH A 33 459 84 HOH HOH . S 4 HOH A 34 460 87 HOH HOH . S 4 HOH A 35 461 88 HOH HOH . S 4 HOH A 36 462 89 HOH HOH . S 4 HOH A 37 463 92 HOH HOH . S 4 HOH A 38 464 94 HOH HOH . S 4 HOH A 39 465 97 HOH HOH . S 4 HOH A 40 466 99 HOH HOH . S 4 HOH A 41 467 100 HOH HOH . S 4 HOH A 42 468 101 HOH HOH . S 4 HOH A 43 469 103 HOH HOH . S 4 HOH A 44 470 104 HOH HOH . S 4 HOH A 45 471 106 HOH HOH . S 4 HOH A 46 472 110 HOH HOH . S 4 HOH A 47 473 114 HOH HOH . S 4 HOH A 48 474 115 HOH HOH . S 4 HOH A 49 475 116 HOH HOH . S 4 HOH A 50 476 117 HOH HOH . S 4 HOH A 51 477 119 HOH HOH . S 4 HOH A 52 478 120 HOH HOH . S 4 HOH A 53 479 121 HOH HOH . S 4 HOH A 54 480 122 HOH HOH . S 4 HOH A 55 481 124 HOH HOH . S 4 HOH A 56 482 125 HOH HOH . S 4 HOH A 57 483 126 HOH HOH . S 4 HOH A 58 484 128 HOH HOH . S 4 HOH A 59 485 129 HOH HOH . S 4 HOH A 60 486 131 HOH HOH . S 4 HOH A 61 487 132 HOH HOH . S 4 HOH A 62 488 133 HOH HOH . S 4 HOH A 63 489 135 HOH HOH . S 4 HOH A 64 490 136 HOH HOH . S 4 HOH A 65 491 137 HOH HOH . T 4 HOH B 1 427 18 HOH HOH . T 4 HOH B 2 428 19 HOH HOH . T 4 HOH B 3 429 20 HOH HOH . T 4 HOH B 4 430 21 HOH HOH . T 4 HOH B 5 431 22 HOH HOH . T 4 HOH B 6 432 24 HOH HOH . T 4 HOH B 7 433 25 HOH HOH . T 4 HOH B 8 434 26 HOH HOH . T 4 HOH B 9 435 29 HOH HOH . T 4 HOH B 10 436 30 HOH HOH . T 4 HOH B 11 437 31 HOH HOH . T 4 HOH B 12 438 32 HOH HOH . T 4 HOH B 13 439 33 HOH HOH . T 4 HOH B 14 440 40 HOH HOH . T 4 HOH B 15 441 42 HOH HOH . T 4 HOH B 16 442 45 HOH HOH . T 4 HOH B 17 443 46 HOH HOH . T 4 HOH B 18 444 49 HOH HOH . T 4 HOH B 19 445 52 HOH HOH . T 4 HOH B 20 446 53 HOH HOH . T 4 HOH B 21 447 55 HOH HOH . T 4 HOH B 22 448 56 HOH HOH . T 4 HOH B 23 449 58 HOH HOH . T 4 HOH B 24 450 61 HOH HOH . T 4 HOH B 25 451 63 HOH HOH . T 4 HOH B 26 452 65 HOH HOH . T 4 HOH B 27 453 66 HOH HOH . T 4 HOH B 28 454 67 HOH HOH . T 4 HOH B 29 455 68 HOH HOH . T 4 HOH B 30 456 71 HOH HOH . T 4 HOH B 31 457 73 HOH HOH . T 4 HOH B 32 458 74 HOH HOH . T 4 HOH B 33 459 77 HOH HOH . T 4 HOH B 34 460 78 HOH HOH . T 4 HOH B 35 461 81 HOH HOH . T 4 HOH B 36 462 85 HOH HOH . T 4 HOH B 37 463 86 HOH HOH . T 4 HOH B 38 464 90 HOH HOH . T 4 HOH B 39 465 91 HOH HOH . T 4 HOH B 40 466 93 HOH HOH . T 4 HOH B 41 467 95 HOH HOH . T 4 HOH B 42 468 96 HOH HOH . T 4 HOH B 43 469 98 HOH HOH . T 4 HOH B 44 470 102 HOH HOH . T 4 HOH B 45 471 105 HOH HOH . T 4 HOH B 46 472 107 HOH HOH . T 4 HOH B 47 473 108 HOH HOH . T 4 HOH B 48 474 109 HOH HOH . T 4 HOH B 49 475 111 HOH HOH . T 4 HOH B 50 476 112 HOH HOH . T 4 HOH B 51 477 113 HOH HOH . T 4 HOH B 52 478 118 HOH HOH . T 4 HOH B 53 479 123 HOH HOH . T 4 HOH B 54 480 127 HOH HOH . T 4 HOH B 55 481 130 HOH HOH . T 4 HOH B 56 482 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . P 3 85.68 55.118 61.679 1 124.97 ? S SO4 424 B 1 HETATM 2 O O1 SO4 . . . P 3 85.837 54.287 62.87 1 125.05 ? O1 SO4 424 B 1 HETATM 3 O O2 SO4 . . . P 3 86.586 56.26 61.761 1 125.15 ? O2 SO4 424 B 1 HETATM 4 O O3 SO4 . . . P 3 85.991 54.331 60.489 1 125.2 ? O3 SO4 424 B 1 HETATM 5 O O4 SO4 . . . P 3 84.303 55.593 61.59 1 125.01 ? O4 SO4 424 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #