data_1VJ2
#
_model_server_result.job_id            '_WPmP_oVZ2dQs91pXznLZQ' 
_model_server_result.datetime_utc      '2025-03-04 09:00:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1vj2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":115}' 
#
_entry.id    1VJ2 
#
_exptl.entry_id    1VJ2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1VJ2 
_cell.length_a            52.55 
_cell.length_b            52.55 
_cell.length_c            96.267 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1VJ2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 64 A HIS 52 1_555 C MN MN . A MN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc2 A NE2 HIS 66 A HIS 54 1_555 C MN MN . A MN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc3 A NE2 HIS 70 A HIS 58 1_555 C MN MN . A MN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc4 A NE2 HIS 104 A HIS 92 1_555 C MN MN . A MN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc5 C MN MN . A MN 115 1_555 F O HOH . A HOH 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc6 C MN MN . A MN 115 1_555 F O HOH . A HOH 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
metalc ? metalc7 B NE2 HIS 64 B HIS 52 1_555 E MN MN . B MN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? 
metalc ? metalc8 B NE2 HIS 66 B HIS 54 1_555 E MN MN . B MN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc9 B NE2 HIS 70 B HIS 58 1_555 E MN MN . B MN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc10 B NE2 HIS 104 B HIS 92 1_555 E MN MN . B MN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc11 E MN MN . B MN 115 1_555 G O HOH . B HOH 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? 
metalc ? metalc12 E MN MN . B MN 115 1_555 G O HOH . B HOH 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1VJ2 
_atom_sites.fract_transf_matrix[1][1]    0.019029 
_atom_sites.fract_transf_matrix[1][2]    0.010987 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021973 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010388 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MN A 1 115 115 MN MN . 
D 3 UNL A 1 116 1 UNL UNL . 
E 2 MN B 1 115 115 MN MN . 
F 4 HOH A 1 117 3 HOH HOH . 
F 4 HOH A 2 118 4 HOH HOH . 
F 4 HOH A 3 119 5 HOH HOH . 
F 4 HOH A 4 120 7 HOH HOH . 
F 4 HOH A 5 121 8 HOH HOH . 
F 4 HOH A 6 122 9 HOH HOH . 
F 4 HOH A 7 123 16 HOH HOH . 
F 4 HOH A 8 124 17 HOH HOH . 
F 4 HOH A 9 125 20 HOH HOH . 
F 4 HOH A 10 126 26 HOH HOH . 
F 4 HOH A 11 127 28 HOH HOH . 
F 4 HOH A 12 128 30 HOH HOH . 
F 4 HOH A 13 129 32 HOH HOH . 
F 4 HOH A 14 130 33 HOH HOH . 
F 4 HOH A 15 131 34 HOH HOH . 
F 4 HOH A 16 132 36 HOH HOH . 
F 4 HOH A 17 133 37 HOH HOH . 
F 4 HOH A 18 134 41 HOH HOH . 
F 4 HOH A 19 135 42 HOH HOH . 
F 4 HOH A 20 136 43 HOH HOH . 
F 4 HOH A 21 137 44 HOH HOH . 
F 4 HOH A 22 138 45 HOH HOH . 
F 4 HOH A 23 139 46 HOH HOH . 
F 4 HOH A 24 140 48 HOH HOH . 
F 4 HOH A 25 141 49 HOH HOH . 
F 4 HOH A 26 142 51 HOH HOH . 
F 4 HOH A 27 143 53 HOH HOH . 
F 4 HOH A 28 144 56 HOH HOH . 
F 4 HOH A 29 145 57 HOH HOH . 
F 4 HOH A 30 146 60 HOH HOH . 
F 4 HOH A 31 147 61 HOH HOH . 
F 4 HOH A 32 148 62 HOH HOH . 
F 4 HOH A 33 149 65 HOH HOH . 
F 4 HOH A 34 150 66 HOH HOH . 
F 4 HOH A 35 151 68 HOH HOH . 
F 4 HOH A 36 152 69 HOH HOH . 
F 4 HOH A 37 153 73 HOH HOH . 
F 4 HOH A 38 154 77 HOH HOH . 
F 4 HOH A 39 155 78 HOH HOH . 
F 4 HOH A 40 156 84 HOH HOH . 
F 4 HOH A 41 157 89 HOH HOH . 
F 4 HOH A 42 158 113 HOH HOH . 
F 4 HOH A 43 159 115 HOH HOH . 
F 4 HOH A 44 160 154 HOH HOH . 
F 4 HOH A 45 161 155 HOH HOH . 
F 4 HOH A 46 162 156 HOH HOH . 
F 4 HOH A 47 163 167 HOH HOH . 
F 4 HOH A 48 164 169 HOH HOH . 
F 4 HOH A 49 165 172 HOH HOH . 
F 4 HOH A 50 166 174 HOH HOH . 
F 4 HOH A 51 167 175 HOH HOH . 
F 4 HOH A 52 168 176 HOH HOH . 
F 4 HOH A 53 169 179 HOH HOH . 
F 4 HOH A 54 170 180 HOH HOH . 
F 4 HOH A 55 171 182 HOH HOH . 
F 4 HOH A 56 172 183 HOH HOH . 
F 4 HOH A 57 173 184 HOH HOH . 
F 4 HOH A 58 174 186 HOH HOH . 
F 4 HOH A 59 175 187 HOH HOH . 
F 4 HOH A 60 176 189 HOH HOH . 
F 4 HOH A 61 177 190 HOH HOH . 
F 4 HOH A 62 178 193 HOH HOH . 
F 4 HOH A 63 179 194 HOH HOH . 
F 4 HOH A 64 180 200 HOH HOH . 
F 4 HOH A 65 181 201 HOH HOH . 
F 4 HOH A 66 182 206 HOH HOH . 
F 4 HOH A 67 183 209 HOH HOH . 
F 4 HOH A 68 184 211 HOH HOH . 
F 4 HOH A 69 185 214 HOH HOH . 
F 4 HOH A 70 186 225 HOH HOH . 
F 4 HOH A 71 187 227 HOH HOH . 
F 4 HOH A 72 188 228 HOH HOH . 
F 4 HOH A 73 189 233 HOH HOH . 
F 4 HOH A 74 190 236 HOH HOH . 
F 4 HOH A 75 191 246 HOH HOH . 
F 4 HOH A 76 192 250 HOH HOH . 
F 4 HOH A 77 193 251 HOH HOH . 
F 4 HOH A 78 194 252 HOH HOH . 
G 4 HOH B 1 116 6 HOH HOH . 
G 4 HOH B 2 117 10 HOH HOH . 
G 4 HOH B 3 118 11 HOH HOH . 
G 4 HOH B 4 119 12 HOH HOH . 
G 4 HOH B 5 120 13 HOH HOH . 
G 4 HOH B 6 121 14 HOH HOH . 
G 4 HOH B 7 122 15 HOH HOH . 
G 4 HOH B 8 123 18 HOH HOH . 
G 4 HOH B 9 124 19 HOH HOH . 
G 4 HOH B 10 125 21 HOH HOH . 
G 4 HOH B 11 126 22 HOH HOH . 
G 4 HOH B 12 127 23 HOH HOH . 
G 4 HOH B 13 128 24 HOH HOH . 
G 4 HOH B 14 129 25 HOH HOH . 
G 4 HOH B 15 130 27 HOH HOH . 
G 4 HOH B 16 131 29 HOH HOH . 
G 4 HOH B 17 132 31 HOH HOH . 
G 4 HOH B 18 133 35 HOH HOH . 
G 4 HOH B 19 134 38 HOH HOH . 
G 4 HOH B 20 135 39 HOH HOH . 
G 4 HOH B 21 136 40 HOH HOH . 
G 4 HOH B 22 137 47 HOH HOH . 
G 4 HOH B 23 138 50 HOH HOH . 
G 4 HOH B 24 139 52 HOH HOH . 
G 4 HOH B 25 140 54 HOH HOH . 
G 4 HOH B 26 141 55 HOH HOH . 
G 4 HOH B 27 142 58 HOH HOH . 
G 4 HOH B 28 143 59 HOH HOH . 
G 4 HOH B 29 144 63 HOH HOH . 
G 4 HOH B 30 145 64 HOH HOH . 
G 4 HOH B 31 146 67 HOH HOH . 
G 4 HOH B 32 147 74 HOH HOH . 
G 4 HOH B 33 148 75 HOH HOH . 
G 4 HOH B 34 149 83 HOH HOH . 
G 4 HOH B 35 150 86 HOH HOH . 
G 4 HOH B 36 151 92 HOH HOH . 
G 4 HOH B 37 152 116 HOH HOH . 
G 4 HOH B 38 153 120 HOH HOH . 
G 4 HOH B 39 154 123 HOH HOH . 
G 4 HOH B 40 155 132 HOH HOH . 
G 4 HOH B 41 156 157 HOH HOH . 
G 4 HOH B 42 157 158 HOH HOH . 
G 4 HOH B 43 158 159 HOH HOH . 
G 4 HOH B 44 159 160 HOH HOH . 
G 4 HOH B 45 160 161 HOH HOH . 
G 4 HOH B 46 161 162 HOH HOH . 
G 4 HOH B 47 162 163 HOH HOH . 
G 4 HOH B 48 163 164 HOH HOH . 
G 4 HOH B 49 164 165 HOH HOH . 
G 4 HOH B 50 165 166 HOH HOH . 
G 4 HOH B 51 166 168 HOH HOH . 
G 4 HOH B 52 167 170 HOH HOH . 
G 4 HOH B 53 168 171 HOH HOH . 
G 4 HOH B 54 169 173 HOH HOH . 
G 4 HOH B 55 170 177 HOH HOH . 
G 4 HOH B 56 171 178 HOH HOH . 
G 4 HOH B 57 172 185 HOH HOH . 
G 4 HOH B 58 173 188 HOH HOH . 
G 4 HOH B 59 174 191 HOH HOH . 
G 4 HOH B 60 175 192 HOH HOH . 
G 4 HOH B 61 176 195 HOH HOH . 
G 4 HOH B 62 177 196 HOH HOH . 
G 4 HOH B 63 178 197 HOH HOH . 
G 4 HOH B 64 179 199 HOH HOH . 
G 4 HOH B 65 180 202 HOH HOH . 
G 4 HOH B 66 181 203 HOH HOH . 
G 4 HOH B 67 182 204 HOH HOH . 
G 4 HOH B 68 183 205 HOH HOH . 
G 4 HOH B 69 184 207 HOH HOH . 
G 4 HOH B 70 185 208 HOH HOH . 
G 4 HOH B 71 186 212 HOH HOH . 
G 4 HOH B 72 187 213 HOH HOH . 
G 4 HOH B 73 188 215 HOH HOH . 
G 4 HOH B 74 189 216 HOH HOH . 
G 4 HOH B 75 190 217 HOH HOH . 
G 4 HOH B 76 191 219 HOH HOH . 
G 4 HOH B 77 192 226 HOH HOH . 
G 4 HOH B 78 193 229 HOH HOH . 
G 4 HOH B 79 194 231 HOH HOH . 
G 4 HOH B 80 195 232 HOH HOH . 
G 4 HOH B 81 196 237 HOH HOH . 
G 4 HOH B 82 197 238 HOH HOH . 
G 4 HOH B 83 198 239 HOH HOH . 
G 4 HOH B 84 199 240 HOH HOH . 
G 4 HOH B 85 200 241 HOH HOH . 
G 4 HOH B 86 201 242 HOH HOH . 
G 4 HOH B 87 202 243 HOH HOH . 
G 4 HOH B 88 203 244 HOH HOH . 
G 4 HOH B 89 204 247 HOH HOH . 
G 4 HOH B 90 205 248 HOH HOH . 
G 4 HOH B 91 206 249 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               36.66 
_atom_site.Cartn_y               1.537 
_atom_site.Cartn_z               -5.257 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.69 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           115 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#