data_1VJ3 # _model_server_result.job_id gOZ6JbVTxMEw0wwlKAKMIw _model_server_result.datetime_utc '2025-04-14 08:40:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1vj3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":300}' # _entry.id 1VJ3 # _exptl.entry_id 1VJ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 467.951 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID N-[2-CHLORO-5-[6-ETHYL-2,4-DIAMINO-PYRIMID-5-YL]-PHENYL]-[BENZYL-TRIAZEN-3-YL]ETHYL ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.74 _cell.angle_gamma 90 _cell.entry_id 1VJ3 _cell.length_a 37.481 _cell.length_b 43.137 _cell.length_c 61.288 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VJ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H26 Cl N7 O2' _chem_comp.formula_weight 467.951 _chem_comp.id TAB _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID N-[2-CHLORO-5-[6-ETHYL-2,4-DIAMINO-PYRIMID-5-YL]-PHENYL]-[BENZYL-TRIAZEN-3-YL]ETHYL ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1' C2' TAB sing 372 n y C1' C6' TAB doub 373 n y C1' N8' TAB sing 374 n n C2' C3' TAB doub 375 n y C2' CL8 TAB sing 376 n n C3' C4' TAB sing 377 n y C3' "H3'1" TAB sing 378 n n C4' C5' TAB doub 379 n y C4' "H4'1" TAB sing 380 n n C5' C6' TAB sing 381 n y C5' C9' TAB sing 382 n y C6' "H6'1" TAB sing 383 n n N8' N65 TAB doub 384 n n C9' C10 TAB sing 385 n y C9' C15 TAB doub 386 n y C10 C11 TAB sing 387 n n C10 N17 TAB doub 388 n y C11 C20 TAB sing 389 n n C11 H111 TAB sing 390 n n C11 H112 TAB sing 391 n n N17 C14 TAB sing 392 n y C14 N22 TAB sing 393 n n C14 N15 TAB doub 394 n y N22 HN21 TAB sing 395 n n N22 HN22 TAB sing 396 n n N15 C15 TAB sing 397 n y C15 N20 TAB sing 398 n n N20 HN11 TAB sing 399 n n N20 HN12 TAB sing 400 n n N18 C19 TAB sing 401 n n N18 C21 TAB sing 402 n n N18 N65 TAB sing 403 n n C19 C27 TAB sing 404 n n C19 H191 TAB sing 405 n n C19 H192 TAB sing 406 n n C20 H201 TAB sing 407 n n C20 H202 TAB sing 408 n n C20 H203 TAB sing 409 n n C21 C22 TAB sing 410 n n C21 H211 TAB sing 411 n n C21 H212 TAB sing 412 n n C22 O23 TAB sing 413 n n C22 H221 TAB sing 414 n n C22 H222 TAB sing 415 n n O23 C24 TAB sing 416 n n C24 C25 TAB sing 417 n n C24 O26 TAB doub 418 n n C25 H251 TAB sing 419 n n C25 H252 TAB sing 420 n n C25 H253 TAB sing 421 n n C27 C28 TAB doub 422 n y C27 C29 TAB sing 423 n y C28 C32 TAB sing 424 n y C28 H281 TAB sing 425 n n C29 C30 TAB doub 426 n y C29 H291 TAB sing 427 n n C30 C31 TAB sing 428 n y C30 H301 TAB sing 429 n n C31 C32 TAB doub 430 n y C31 H311 TAB sing 431 n n C32 H321 TAB sing 432 n n # _atom_sites.entry_id 1VJ3 _atom_sites.fract_transf_matrix[1][1] 0.02668 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002212 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023182 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016372 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 207 207 NDP NDP . C 3 TAB A 1 300 300 TAB TAB . D 4 HOH A 1 209 209 HOH HOH . D 4 HOH A 2 210 210 HOH HOH . D 4 HOH A 3 211 211 HOH HOH . D 4 HOH A 4 212 212 HOH HOH . D 4 HOH A 5 213 213 HOH HOH . D 4 HOH A 6 214 214 HOH HOH . D 4 HOH A 7 215 215 HOH HOH . D 4 HOH A 8 216 216 HOH HOH . D 4 HOH A 9 217 217 HOH HOH . D 4 HOH A 10 218 218 HOH HOH . D 4 HOH A 11 219 219 HOH HOH . D 4 HOH A 12 220 220 HOH HOH . D 4 HOH A 13 221 221 HOH HOH . D 4 HOH A 14 222 222 HOH HOH . D 4 HOH A 15 223 223 HOH HOH . D 4 HOH A 16 224 224 HOH HOH . D 4 HOH A 17 225 225 HOH HOH . D 4 HOH A 18 226 226 HOH HOH . D 4 HOH A 19 227 227 HOH HOH . D 4 HOH A 20 228 228 HOH HOH . D 4 HOH A 21 229 229 HOH HOH . D 4 HOH A 22 230 230 HOH HOH . D 4 HOH A 23 231 231 HOH HOH . D 4 HOH A 24 232 232 HOH HOH . D 4 HOH A 25 233 233 HOH HOH . D 4 HOH A 26 234 234 HOH HOH . D 4 HOH A 27 235 235 HOH HOH . D 4 HOH A 28 236 236 HOH HOH . D 4 HOH A 29 237 237 HOH HOH . D 4 HOH A 30 238 238 HOH HOH . D 4 HOH A 31 239 239 HOH HOH . D 4 HOH A 32 240 240 HOH HOH . D 4 HOH A 33 241 241 HOH HOH . D 4 HOH A 34 242 242 HOH HOH . D 4 HOH A 35 243 243 HOH HOH . D 4 HOH A 36 244 244 HOH HOH . D 4 HOH A 37 245 245 HOH HOH . D 4 HOH A 38 246 246 HOH HOH . D 4 HOH A 39 247 247 HOH HOH . D 4 HOH A 40 248 248 HOH HOH . D 4 HOH A 41 249 249 HOH HOH . D 4 HOH A 42 250 250 HOH HOH . D 4 HOH A 43 251 251 HOH HOH . D 4 HOH A 44 252 252 HOH HOH . D 4 HOH A 45 253 253 HOH HOH . D 4 HOH A 46 254 254 HOH HOH . D 4 HOH A 47 255 255 HOH HOH . D 4 HOH A 48 256 256 HOH HOH . D 4 HOH A 49 257 257 HOH HOH . D 4 HOH A 50 258 258 HOH HOH . D 4 HOH A 51 259 259 HOH HOH . D 4 HOH A 52 260 260 HOH HOH . D 4 HOH A 53 261 261 HOH HOH . D 4 HOH A 54 262 262 HOH HOH . D 4 HOH A 55 263 263 HOH HOH . D 4 HOH A 56 264 264 HOH HOH . D 4 HOH A 57 265 265 HOH HOH . D 4 HOH A 58 266 266 HOH HOH . D 4 HOH A 59 267 267 HOH HOH . D 4 HOH A 60 268 268 HOH HOH . D 4 HOH A 61 269 269 HOH HOH . D 4 HOH A 62 270 270 HOH HOH . D 4 HOH A 63 271 271 HOH HOH . D 4 HOH A 64 272 272 HOH HOH . D 4 HOH A 65 273 273 HOH HOH . D 4 HOH A 66 274 274 HOH HOH . D 4 HOH A 67 275 275 HOH HOH . D 4 HOH A 68 276 276 HOH HOH . D 4 HOH A 69 277 277 HOH HOH . D 4 HOH A 70 278 278 HOH HOH . D 4 HOH A 71 279 279 HOH HOH . D 4 HOH A 72 280 280 HOH HOH . D 4 HOH A 73 281 281 HOH HOH . D 4 HOH A 74 282 282 HOH HOH . D 4 HOH A 75 283 283 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' TAB . . . C 3 15.045 6.616 13.176 1 31.65 ? C1' TAB 300 A 1 HETATM 2 C C2' TAB . . . C 3 15.738 6.358 14.358 1 31.29 ? C2' TAB 300 A 1 HETATM 3 C C3' TAB . . . C 3 15.228 5.294 15.097 1 32.19 ? C3' TAB 300 A 1 HETATM 4 C C4' TAB . . . C 3 14.128 4.535 14.662 1 30.81 ? C4' TAB 300 A 1 HETATM 5 C C5' TAB . . . C 3 13.466 4.802 13.493 1 28.02 ? C5' TAB 300 A 1 HETATM 6 C C6' TAB . . . C 3 13.946 5.854 12.721 1 32.31 ? C6' TAB 300 A 1 HETATM 7 CL CL8 TAB . . . C 3 17.092 7.294 14.9 1 31.2 ? CL8 TAB 300 A 1 HETATM 8 N N8' TAB . . . C 3 15.411 7.633 12.411 1 31.65 ? N8' TAB 300 A 1 HETATM 9 C C9' TAB . . . C 3 12.407 4.008 13.071 1 25.7 ? C9' TAB 300 A 1 HETATM 10 C C10 TAB . . . C 3 12.569 3.239 11.87 1 24.65 ? C10 TAB 300 A 1 HETATM 11 C C11 TAB . . . C 3 13.814 3.325 10.995 1 26.24 ? C11 TAB 300 A 1 HETATM 12 N N17 TAB . . . C 3 11.623 2.402 11.401 1 20.19 ? N17 TAB 300 A 1 HETATM 13 C C14 TAB . . . C 3 10.456 2.312 12.11 1 20.2 ? C14 TAB 300 A 1 HETATM 14 N N22 TAB . . . C 3 9.513 1.449 11.605 1 18.93 ? N22 TAB 300 A 1 HETATM 15 N N15 TAB . . . C 3 10.327 2.998 13.27 1 19.91 ? N15 TAB 300 A 1 HETATM 16 C C15 TAB . . . C 3 11.237 3.817 13.803 1 23.04 ? C15 TAB 300 A 1 HETATM 17 N N20 TAB . . . C 3 11.049 4.536 14.954 1 23.8 ? N20 TAB 300 A 1 HETATM 18 N N18 TAB . . . C 3 15.73 8.334 10.201 1 30.25 ? N18 TAB 300 A 1 HETATM 19 C C19 TAB . A . C 3 17.161 8.018 10.404 0.5 31.89 ? C19 TAB 300 A 1 HETATM 20 C C19 TAB . B . C 3 15.312 9.422 9.288 0.5 31.89 ? C19 TAB 300 A 1 HETATM 21 C C20 TAB . . . C 3 14.631 1.988 11.138 1 27.43 ? C20 TAB 300 A 1 HETATM 22 C C21 TAB . A . C 3 15.35 9.179 9.132 0.5 30.35 ? C21 TAB 300 A 1 HETATM 23 C C21 TAB . B . C 3 16.948 7.646 9.934 0.5 30.35 ? C21 TAB 300 A 1 HETATM 24 C C22 TAB . A . C 3 14.424 8.533 8.114 0.5 29.41 ? C22 TAB 300 A 1 HETATM 25 C C22 TAB . B . C 3 17.043 7.097 8.519 0.5 29.41 ? C22 TAB 300 A 1 HETATM 26 O O23 TAB . A . C 3 14.168 9.598 7.114 0.5 30.96 ? O23 TAB 300 A 1 HETATM 27 O O23 TAB . B . C 3 17.904 5.896 8.643 0.5 30.96 ? O23 TAB 300 A 1 HETATM 28 C C24 TAB . A . C 3 12.835 9.732 6.962 0.5 29.73 ? C24 TAB 300 A 1 HETATM 29 C C24 TAB . B . C 3 18.651 5.787 7.525 0.5 29.73 ? C24 TAB 300 A 1 HETATM 30 C C25 TAB . A . C 3 12.283 10.606 5.857 0.5 29.07 ? C25 TAB 300 A 1 HETATM 31 C C25 TAB . B . C 3 18.652 6.904 6.504 0.5 29.07 ? C25 TAB 300 A 1 HETATM 32 O O26 TAB . A . C 3 11.892 9.18 7.576 0.5 29.61 ? O26 TAB 300 A 1 HETATM 33 O O26 TAB . B . C 3 19.452 4.89 7.173 0.5 29.61 ? O26 TAB 300 A 1 HETATM 34 C C27 TAB . A . C 3 17.49 7.442 9.024 0.5 36.99 ? C27 TAB 300 A 1 HETATM 35 C C27 TAB . B . C 3 14.385 9.371 8.062 0.5 36.99 ? C27 TAB 300 A 1 HETATM 36 C C28 TAB . A . C 3 17.377 6.106 8.582 0.5 37.12 ? C28 TAB 300 A 1 HETATM 37 C C28 TAB . B . C 3 14.841 9.7 6.767 0.5 37.12 ? C28 TAB 300 A 1 HETATM 38 C C29 TAB . A . C 3 17.976 8.399 8.103 0.5 38.63 ? C29 TAB 300 A 1 HETATM 39 C C29 TAB . B . C 3 13.028 8.999 8.206 0.5 38.63 ? C29 TAB 300 A 1 HETATM 40 C C30 TAB . A . C 3 18.348 8.091 6.801 0.5 38.53 ? C30 TAB 300 A 1 HETATM 41 C C30 TAB . B . C 3 12.131 8.947 7.147 0.5 38.53 ? C30 TAB 300 A 1 HETATM 42 C C31 TAB . A . C 3 18.212 6.784 6.386 0.5 38.31 ? C31 TAB 300 A 1 HETATM 43 C C31 TAB . B . C 3 12.602 9.255 5.889 0.5 38.31 ? C31 TAB 300 A 1 HETATM 44 C C32 TAB . A . C 3 17.729 5.817 7.266 0.5 38.61 ? C32 TAB 300 A 1 HETATM 45 C C32 TAB . B . C 3 13.936 9.618 5.711 0.5 38.61 ? C32 TAB 300 A 1 HETATM 46 N N65 TAB . . . C 3 14.815 7.947 11.237 1 30.7 ? N65 TAB 300 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 46 #